Don DeAngelis, Ph.D. (Former Employee)
Science and Products
Filter Total Items: 194
Population age and initial density in a patchy environment affect the occurrence of abrupt transitions in a birth-and-death model of Taylor's law
Taylor's power law describes an empirical relationship between the mean and variance of population densities in field data, in which the variance varies as a power, b, of the mean. Most studies report values of b varying between 1 and 2. However, Cohen (2014a) showed recently that smooth changes in environmental conditions in a model can lead to an abrupt, infinite change in b. To...
Authors
Jiang Jiang, Donald L. DeAngelis, B. Zhang, J.E. Cohen
Analysis and simulation of propagule dispersal and salinity intrusion from storm surge on the movement of a marsh–mangrove ecotone in South Florida
Coastal mangrove–freshwater marsh ecotones of the Everglades represent transitions between marine salt-tolerant halophytic and freshwater salt-intolerant glycophytic communities. It is hypothesized here that a self-reinforcing feedback, termed a “vegetation switch,” between vegetation and soil salinity, helps maintain the sharp mangrove–marsh ecotone. A general theoretical implication of...
Authors
Jiang Jiang, Donald L. DeAngelis, Gordon H. Anderson, Thomas J. Smith
Can antibrowsing defense regulate the spread of woody vegetation in arctic tundra?
Global climate warming is projected to promote the increase of woody plants, especially shrubs, in arctic tundra. Many factors may affect the extent of this increase, including browsing by mammals. We hypothesize that across the Arctic the effect of browsing will vary because of regional variation in antibrowsing chemical defense. Using birch (Betula) as a case study, we propose that...
Authors
John P. Bryant, Kyle Joly, F. Stuart Chapin, Donald L. DeAngelis, Knut Kielland
Simulating mechanisms for dispersal, production and stranding of small forage fish in temporary wetland habitats
Movement strategies of small forage fish (
Authors
Simeon Yurek, Donald L. DeAngelis, Joel C. Trexler, Fred Jopp, Douglas D. Donalson
Representing the acquisition and use of energy by individuals in agent-based models of animal populations
1. Agent-based models (ABMs) are widely used to predict how populations respond to changing environments. As the availability of food varies in space and time, individuals should have their own energy budgets, but there is no consensus as to how these should be modelled. Here, we use knowledge of physiological ecology to identify major issues confronting the modeller and to make...
Authors
Richard M. Sibly, Volker Grimm, Benjamin T. Martin, Alice S.A. Johnston, Katarzyna Kulakowska, Christopher J. Topping, Peter Calow, Jacob Nabe-Nielsen, Pernille Thorbek, Donald L. DeAngelis
Trait contributions to fish community assembly emerge from trophicinteractions in an individual-based model
Community ecology seeks to understand and predict the characteristics of communities that can develop under different environmental conditions, but most theory has been built on analytical models that are limited in the diversity of species traits that can be considered simultaneously. We address that limitation with an individual-based model to simulate assembly of fish communities...
Authors
Henrique C. Giacomini, Donald L. DeAngelis, Joel C. Trexler, Miguel Petrere
Strong species-environment feedback shapes plant community assembly along environmental gradients
An aim of community ecology is to understand the patterns of competing species assembly along environmental gradients. All species interact with their environments. However, theories of community assembly have seldom taken into account the effects of species that are able to engineer the environment. In this modeling study, we integrate the species' engineering trait together with...
Authors
Jiang Jiang, Donald L. DeAngelis
Plant allocation of carbon to defense as a function of herbivory, light and nutrient availability
We use modeling to determine the optimal relative plant carbon allocations between foliage, fine roots, anti-herbivore defense, and reproduction to maximize reproductive output. The model treats these plant components and the herbivore compartment as variables. Herbivory is assumed to be purely folivory. Key external factors include nutrient availability, degree of shading, and intensity...
Authors
Donald L. DeAngelis, Shu Ju, Rongsong Liu, John P. Bryant, Stephen A. Gourley
Towards a theory of ecotone resilience: coastal vegetation on a salinity gradient
Ecotones represent locations where vegetation change is likely to occur as a result of climate and other environmental changes. Using a model of an ecotone vulnerable to such future changes, we estimated the resilience of the ecotone to disturbances. The specific ecotone is that between two different vegetation types, salinity-tolerant and salinity-intolerant, along a gradient in...
Authors
Jiang Jiang, Daozhou Gao, Donald L. DeAngelis
Plant toxins and trophic cascades alter fire regime and succession on a boral forest landscape
Two models were integrated in order to study the effect of plant toxicity and a trophic cascade on forest succession and fire patterns across a boreal landscape in central Alaska. One of the models, ALFRESCO, is a cellular automata model that stochastically simulates transitions from spruce dominated 1 km2 spatial cells to deciduous woody vegetation based on stochastic fires, and from...
Authors
Zhilan Feng, Jorge A. Alfaro-Murillo, Donald L. DeAngelis, Jennifer I. Schmidt, Matthew Barga, Yiqiang Zheng, Muhammad Hanis B. Ahmad Tamrin, Mark L. Olson, Tim Glaser, Knut Kielland, F. Stuart Chapin, John P. Bryant
Spatial pattern formation of coastal vegetation in response to external gradients and positive feedbacks affecting soil porewater salinity: A model study
Coastal vegetation of South Florida typically comprises salinity-tolerant mangroves bordering salinity-intolerant hardwood hammocks and fresh water marshes. Two primary ecological factors appear to influence the maintenance of mangrove/hammock ecotones against changes that might occur due to disturbances. One of these is a gradient in one or more environmental factors. The other is the...
Authors
J. Jiang, Donald L. DeAngelis, T. S. Smith, S.Y. Teh, H. L. Koh
Dynamics of a plant-herbivore-predator system with plant-toxicity
A system of ordinary differential equations is considered that models the interactions of two plant species populations, an herbivore population, and a predator population. We use a toxin-determined functional response to describe the interactions between plant species and herbivores and use a Holling Type II functional response to model the interactions between herbivores and predators...
Authors
Zhilan Feng, Zhipeng Qiu, Rongsong Liu, Donald L. DeAngelis
Science and Products
Filter Total Items: 194
Population age and initial density in a patchy environment affect the occurrence of abrupt transitions in a birth-and-death model of Taylor's law
Taylor's power law describes an empirical relationship between the mean and variance of population densities in field data, in which the variance varies as a power, b, of the mean. Most studies report values of b varying between 1 and 2. However, Cohen (2014a) showed recently that smooth changes in environmental conditions in a model can lead to an abrupt, infinite change in b. To...
Authors
Jiang Jiang, Donald L. DeAngelis, B. Zhang, J.E. Cohen
Analysis and simulation of propagule dispersal and salinity intrusion from storm surge on the movement of a marsh–mangrove ecotone in South Florida
Coastal mangrove–freshwater marsh ecotones of the Everglades represent transitions between marine salt-tolerant halophytic and freshwater salt-intolerant glycophytic communities. It is hypothesized here that a self-reinforcing feedback, termed a “vegetation switch,” between vegetation and soil salinity, helps maintain the sharp mangrove–marsh ecotone. A general theoretical implication of...
Authors
Jiang Jiang, Donald L. DeAngelis, Gordon H. Anderson, Thomas J. Smith
Can antibrowsing defense regulate the spread of woody vegetation in arctic tundra?
Global climate warming is projected to promote the increase of woody plants, especially shrubs, in arctic tundra. Many factors may affect the extent of this increase, including browsing by mammals. We hypothesize that across the Arctic the effect of browsing will vary because of regional variation in antibrowsing chemical defense. Using birch (Betula) as a case study, we propose that...
Authors
John P. Bryant, Kyle Joly, F. Stuart Chapin, Donald L. DeAngelis, Knut Kielland
Simulating mechanisms for dispersal, production and stranding of small forage fish in temporary wetland habitats
Movement strategies of small forage fish (
Authors
Simeon Yurek, Donald L. DeAngelis, Joel C. Trexler, Fred Jopp, Douglas D. Donalson
Representing the acquisition and use of energy by individuals in agent-based models of animal populations
1. Agent-based models (ABMs) are widely used to predict how populations respond to changing environments. As the availability of food varies in space and time, individuals should have their own energy budgets, but there is no consensus as to how these should be modelled. Here, we use knowledge of physiological ecology to identify major issues confronting the modeller and to make...
Authors
Richard M. Sibly, Volker Grimm, Benjamin T. Martin, Alice S.A. Johnston, Katarzyna Kulakowska, Christopher J. Topping, Peter Calow, Jacob Nabe-Nielsen, Pernille Thorbek, Donald L. DeAngelis
Trait contributions to fish community assembly emerge from trophicinteractions in an individual-based model
Community ecology seeks to understand and predict the characteristics of communities that can develop under different environmental conditions, but most theory has been built on analytical models that are limited in the diversity of species traits that can be considered simultaneously. We address that limitation with an individual-based model to simulate assembly of fish communities...
Authors
Henrique C. Giacomini, Donald L. DeAngelis, Joel C. Trexler, Miguel Petrere
Strong species-environment feedback shapes plant community assembly along environmental gradients
An aim of community ecology is to understand the patterns of competing species assembly along environmental gradients. All species interact with their environments. However, theories of community assembly have seldom taken into account the effects of species that are able to engineer the environment. In this modeling study, we integrate the species' engineering trait together with...
Authors
Jiang Jiang, Donald L. DeAngelis
Plant allocation of carbon to defense as a function of herbivory, light and nutrient availability
We use modeling to determine the optimal relative plant carbon allocations between foliage, fine roots, anti-herbivore defense, and reproduction to maximize reproductive output. The model treats these plant components and the herbivore compartment as variables. Herbivory is assumed to be purely folivory. Key external factors include nutrient availability, degree of shading, and intensity...
Authors
Donald L. DeAngelis, Shu Ju, Rongsong Liu, John P. Bryant, Stephen A. Gourley
Towards a theory of ecotone resilience: coastal vegetation on a salinity gradient
Ecotones represent locations where vegetation change is likely to occur as a result of climate and other environmental changes. Using a model of an ecotone vulnerable to such future changes, we estimated the resilience of the ecotone to disturbances. The specific ecotone is that between two different vegetation types, salinity-tolerant and salinity-intolerant, along a gradient in...
Authors
Jiang Jiang, Daozhou Gao, Donald L. DeAngelis
Plant toxins and trophic cascades alter fire regime and succession on a boral forest landscape
Two models were integrated in order to study the effect of plant toxicity and a trophic cascade on forest succession and fire patterns across a boreal landscape in central Alaska. One of the models, ALFRESCO, is a cellular automata model that stochastically simulates transitions from spruce dominated 1 km2 spatial cells to deciduous woody vegetation based on stochastic fires, and from...
Authors
Zhilan Feng, Jorge A. Alfaro-Murillo, Donald L. DeAngelis, Jennifer I. Schmidt, Matthew Barga, Yiqiang Zheng, Muhammad Hanis B. Ahmad Tamrin, Mark L. Olson, Tim Glaser, Knut Kielland, F. Stuart Chapin, John P. Bryant
Spatial pattern formation of coastal vegetation in response to external gradients and positive feedbacks affecting soil porewater salinity: A model study
Coastal vegetation of South Florida typically comprises salinity-tolerant mangroves bordering salinity-intolerant hardwood hammocks and fresh water marshes. Two primary ecological factors appear to influence the maintenance of mangrove/hammock ecotones against changes that might occur due to disturbances. One of these is a gradient in one or more environmental factors. The other is the...
Authors
J. Jiang, Donald L. DeAngelis, T. S. Smith, S.Y. Teh, H. L. Koh
Dynamics of a plant-herbivore-predator system with plant-toxicity
A system of ordinary differential equations is considered that models the interactions of two plant species populations, an herbivore population, and a predator population. We use a toxin-determined functional response to describe the interactions between plant species and herbivores and use a Holling Type II functional response to model the interactions between herbivores and predators...
Authors
Zhilan Feng, Zhipeng Qiu, Rongsong Liu, Donald L. DeAngelis