Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41764
Stationary hydroacoustics demonstrates vessel avoidance biases during mobile hydroacoustic surveys of alewife in Lake Ontario
Mobile hydroacoustic surveys are routinely used to estimate pelagic fish abundance. In the Great Lakes, alewife are commonly surveyed with mobile hydroacoustics, however, their behavior often has them associated with epilimnetic habitats which increases the potential for vessel avoidance to bias hydroacoustic observations. Abundance estimates from mobile hydroacoustic surveys are typically made us
Authors
Conner Elliot, Jeremy Holden, Michael Connerton, Brian C. Weidel, Bruce Tufts
When introduced prey violates trophic hierarchy: Conservation of an endangered predator
Introduced species often disrupt established food webs, but some native predators can come to rely on introduced prey. Understanding the net effects of the non-natives on imperiled predators is crucial for planning conservation measures. The invasive American bullfrog (Lithobates catesbeianus) can be prey, predator, and competitor for the critically endangered San Francisco garter snake (Thamnophi
Authors
Richard Kim, Brian J. Halstead, Eric J. Routman, Julie Anderson
Automated telemetry reveals post-reintroduction exploratory behavior and movement patterns of an endangered corvid, ʻAlalā (Corvus hawaiiensis) in Hawaiʻi, USA
Continuous movement monitoring is a powerful tool for evaluating reintroduction techniques and assessing how well reintroduced animals are adjusting to the wild. However, to date, continuous monitoring has only occurred for large-bodied species capable of carrying heavy tracking devices. In this study we used an automated VHF radio telemetry array to investigate the exploratory behavior and moveme
Authors
Jennifer R Smetzer, Alison L Greggor, Kristina L. Paxton, Bryce M Masuda, Eben H. Paxton
Causes of delayed outbreak responses and their impacts on epidemic spread
Livestock diseases have devastating consequences economically, socially and politically across the globe. In certain systems, pathogens remain viable after host death, which enables residual transmissions from infected carcasses. Rapid culling and carcass disposal are well-established strategies for stamping out an outbreak and limiting its impact; however, wait-times for these procedures, i.e. re
Authors
Y Tao, William J. M. Probert, Katriona Shea, Michael C. Runge, Kevin D. Lafferty, Michael J. Tildesley, Matthew J. Ferrari
Weather and distance to fire refugia limit landscape‐level occurrence of fungal disease in an exotic annual grass
The enemy release hypothesis proposes that invasion by exotic plant species is driven by their release from natural enemies (i.e. herbivores and pathogens) in their introduced ranges. However, in many cases, natural enemies, which may be introduced or managed to regulate invasive species, may fail to impact target host populations. Landscape heterogeneity, which can affect both the population dyna
Authors
Cara Applestein, Allison Barbara Simler-Williamson, Matthew J. Germino
Global political responsibility for the conservation of albatrosses and large petrels
Migratory marine species cross political borders and enter the high seas, where the lack of an effective global management framework for biodiversity leaves them vulnerable to threats. Here, we combine 10,108 tracks from 5775 individual birds at 87 sites with data on breeding population sizes to estimate the relative year-round importance of national jurisdictions and high seas areas for 39 specie
Authors
Martin Beal, Maria P. Dias, Richard A. Phillips, Steffen Oppel, Carolina Hazin, Elizabeth J. Pearmin, Josh Adams, David J Anderson, Michelle Antolos, Javier A Arata, José Manuel Arcos, John P. Y. Arnould, Jill Awkerman, Elizabeth Bell, Mike Bell, Mark Carey, Ryan Carle, Thomas A Clay, Jaimie Cleeland, Valentina Colodro, Melinda G. Conners, Marta Cruz-Flores, Richard Cuthbert, Karine Delord, Lorna Deppe, Ben J Dilley, Herculano A. Dinis, Graeme Elliot, Fernanda de Felipe, Jonathan J. Felis, Manuela G. Forero, Amanda Freeman, Akira Fukuda, Jacob González-Solís, José Pedro Granadeiro, April Hedd, Peter Hodum, José Manuel Igual, Audrey Jaeger, Todd J Landers, Le Corre Matthieu, Azwianewi Makhado, Benjamin Metzger, Teresa Militão, William A Montevecchi, Virginia Morera-Pujol, Leia Navarro-Herrero, Deon Nel, David Nicholls, Daniel Oro, Ridha Ouni, Kiyoaki Ozaki, Flavio Quintana, Raül Ramos, Tim Reid, José Manuel Reyes-González, Christopher Robertson, Graham Robertson, Mohamed Salah Romdhane, Peter G. Ryan, Paul Sagar, Fumio Sato, Stefan Schoombie, R. Paul Scofield, Scott A. Shaffer, Nirmal Jivan Shah, Kim L Stevens, Christopher Surman, Robert M. Suryan, Akinori Takahashi, Vikash Tatayah, Graeme Taylor, David R. Thompson, Leigh Torres, Kath Walker, Ross M. Wanless, Susan M. Waugh, Henri Weimerskirch, Takashi Yamamoto, Zuzana Zajkova, Laura Zango, Paulo Catry
The smell of success: Reproductive success related to rub behavior in brown bears
Several species of bears are known to rub deliberately against trees and other objects, but little is known about why bears rub. Patterns in rubbing behavior of male and female brown bears (Ursus arctos) suggest that scent marking via rubbing functions to communicate among potential mates or competitors. Using DNA from bear hairs collected from rub objects in southwestern Alberta from 2011–2014 an
Authors
Andrea T. Morehouse, Anne E. Loosen, Tabitha Graves, Mark S. Boyce
Spatial variation in population dynamics of northern Great Plains piping plovers
Metapopulation dynamics are determined not only by within-patch birth and death processes but also by between-patch movements of individuals (emigration and immigration). To conserve and manage a species that has a metapopulation structure, defined by local populations that are distributed among patches of suitable habitat, we need to understand each of these vital rates. For the federally listed
Authors
Rose J. Swift, Michael J. Anteau, Kristen S. Ellis, Megan M. Ring, Mark H. Sherfy, Dustin L. Toy, David N. Koons
Genomic comparison of carbapenem-resistant Enterobacteriaceae from humans and gulls in Alaska
ObjectivesWildlife may harbor clinically important antimicrobial resistant (AMR) bacteria, but the role of wildlife in the epidemiology of AMR bacterial infections in humans is largely unknown. In this study, we aimed to assess dissemination of theblaKPC carbapenemase gene among humans and gulls in Alaska.MethodsWe performed whole genome sequencing to determine the genetic context ofblaKPC in bact
Authors
Christina Ahlstrom, Anna Frick, Catherine Pongratz, Kimberly Spink, Catherine Xavier, Jonas Bonnedahl, Andrew M. Ramey
Why is tree drought mortality so hard to predict?
Widespread tree mortality following droughts has emerged as an environmentally and economically devastating ‘ecological surprise’. It is well established that tree physiology is important in understanding drought-driven mortality; however, the accuracy of predictions based on physiology alone has been limited. We propose that complicating factors at two levels stymie predictions of drought-driven
Authors
Anna T Trugman, Leander D.L. Anderegg, William RL Anderegg, Adrian Das, Nathan L. Stephenson
Genomic association with pathogen carriage in bighorn sheep (Ovis canadensis)
Genetic composition can influence host susceptibility to, and transmission of, pathogens, with potential population‐level consequences. In bighorn sheep (Ovis canadensis), pneumonia epidemics caused by Mycoplasma ovipneumoniae have been associated with severe population declines and limited recovery across North America. Adult survivors either clear the infection or act as carriers that continuall
Authors
Alynn Martin, E. Frances Cassirer, Lisette P. Waits, Raina K. Plowright, Paul C. Cross, Kimberly R. Andrews
Surface-air mercury fluxes and a watershed mass balance in forested and harvested catchments
Forest soils are among the world’s largest repositories for long-term accumulation of atmospherically deposited mercury (Hg), and understanding the potential for remobilization through gaseous emissions, aqueous dissolution and runoff, or erosive particulate transport to down-gradient aquatic ecosystems is critically important for projecting ecosystem recovery. Forestry operations, especially clea
Authors
Chris S. Eckley, Collin Eagles-Smith, Michael T. Tate, David P. Krabbenhoft