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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41772

My life in dogs

No abstract available.
Authors
Beth Middleton

Rediscovery of the horseshoe shrimp Lightiella serendipita Jones, 1961 (Cephalocarida: Hutchinsoniellidae) in San Francisco Bay, California, USA, with a key to the worldwide species of Cephalocarida

Lightiella serendipitaJones, 1961 was first discovered in San Francisco Bay, California in 1953, but it had not been observed since 1988. In 2017, a total of 13 adult L. serendipita specimens were found as part of a study in central San Francisco Bay, nearly doubling the total number of specimens ever collected. We measured vertical distribution of macroinvertebrates and environmental variables, i
Authors
Crystal Garcia, Isa Woo, D. Christopher Rogers, Alison M Flanagan, Susan E. W. De La Cruz

Atlantic salmon (Salmo salar) exposed to different preparatory photoperiods during smoltification show varying responses in gill Na+/K+-ATPase, salinity-specific mRNA transcription and ionocyte differentiation

Control of the parr-smolt transformation (or smoltification) is crucial for the husbandry and successful seawater (SW) transfer of Atlantic salmon (Salmo salar) reared in freshwater (FW) hatcheries. Photoperiod is an important environmental signal that initiates the complex physiological, morphological and behavioural changes that coincide with marine migration. While the use of long-day photoperi
Authors
Christian A. van Rijn, Paul L. Jones, Aaron G. Schultz, Brad S. Evans, Stephen D. McCormick, Luis O.B. Afonso

11‑Deoxycortisol controls hydromineral balance in the most basal osmoregulating vertebrate, sea lamprey (Petromyzon marinus)

It is unknown whether and how osmoregulation is controlled by corticosteroid signaling in the phylogenetically basal vertebrate group Agnatha, including lampreys and hagfishes. It is known that a truncated steroid biosynthetic pathway in lampreys produces two predominant circulating corticosteroids, 11-deoxycortisol (S) and 11-deoxycorticosterone (DOC). Furthermore, lampreys express only a single,
Authors
Ciaran A. Shaughnessy, Andre Barany-Ruiz, Stephen D. McCormick

Establishing Forster’s Tern (Sterna forsteri) nesting sites at pond A16 using social attraction for the South Bay Salt Pond restoration project

Forster’s terns (Sterna forsteri), historically one of the most numerous colonial-breeding waterbirds in South San Francisco Bay, California, have experienced recent decreases in the number of nesting colonies and overall breeding population size. The South Bay Salt Pond Restoration Project aims to restore 50–90 percent of former salt evaporation ponds to tidal marsh habitat in South San Francisco
Authors
C. Alex Hartman, Josh T. Ackerman, Mark P. Herzog, Yiwei Wang, Cheryl Strong

Restoration at the landscape scale as a means of mitigation and adaptation to climate change

Purpose of ReviewAlthough landscape-scale restoration efforts are gaining traction worldwide, their success is generally unknown. We review landscape-scale restorations to gain insight to whether focal ecological outcomes have been achieved, in the face of changing environmental conditions.Recent FindingsOnly 9% of the 477 articles that resulted from our search were studies of landscape-scale rest
Authors
Betsy von Holle, Stephanie G. Yelenik, Elise S Gornish

The utility of zooarchaeological data to guide listing efforts for an imperiled mussel species (Bivalvia: Unionidae: Pleurobema riddellii)

The status of species in freshwater systems shift over time due to natural and anthropogenic causes. Determining the magnitude and cause of these shifts requires a long-term perspective. This process is complicated when there are also questions about the taxonomic validity of a species. Addressing these issues is important because both can undermine conservation and management efforts if incorrect
Authors
Charles R. Randklev, Steve Wolverton, Nathan A. Johnson, Chase H. Smith, Traci DuBose, Clint Robertson, Julian Conley

Use of upland and riparian areas by wintering bald eagles and implications for wind energy

Weather can shape movements of animals and alter their exposure to anthropogenic threats. Bald eagles (Haliaeetus leucocephalus) are increasingly at risk from collision with turbines used in onshore wind energy generation. In the midwestern United States, development of this energy source typically occurs in upland areas that bald eagles use only intermittently. Our objective was to determine the
Authors
Sara J Schmuecker, Drew A Becker, Michael J. Lanzone, Bob Fogg, Susan P Romano, Todd E. Katzner, Tricia A. Miller

Nesting ecology of White-faced Ibis (Plegadis chihi) in Great Salt Lake, Utah

We studied the nesting ecology of White-faced Ibis (Plegadis chihi) at 3 sites within the Bear River Migratory Bird Refuge, Great Salt Lake, Utah, USA. Ibises built nests in small mounds (mean height = 14.4 ± 4.3 cm) above shallow water (mean depth = 12.0 ± 6.6 cm) located within patchy vegetation (mean percent vegetative cover = 17.2 ± 17.8% vegetative cover) with mean vegetation height of 31.7 ±
Authors
Mark P. Herzog, Josh T. Ackerman, C. Alex Hartman, Howard Browers

Mountain stoneflies may tolerate warming streams: Evidence from organismal physiology and gene expression

Rapid glacier recession is altering the physical conditions of headwater streams. Stream temperatures are predicted to rise and become increasingly variable, putting entire meltwater-associated biological communities at risk of extinction. Thus, there is a pressing need to understand how thermal stress affects mountain stream insects, particularly where glaciers are likely to vanish on contemporar
Authors
Scott Hotaling, Alisha A. Shah, Kerry L. McGowan, Lusha M. Tronstad, J. Joseph Giersch, Debra S. Finn, H. Arthur Woods, Michael E. Dillon, Joanna L. Kelley

Taxonomic evaluation of the Grallaria rufula (Rufous Antpitta) complex (Aves: Passeriformes: Grallariidae) distinguishes sixteen species

Populations in the Rufous Antpitta (Grallaria rufula) complex occupy humid montane forests of the Andes from northern Colombia and adjacent Venezuela to central Bolivia. Their tawny to cinnamon-colored plumages are generally uniform, featuring subtle variation in hue and saturation across this range. In contrast to their conservative plumage, substantial vocal differences occur among geographicall
Authors
Morton L Isler, Terry Chesser, Mark B Robbins, Andres M Cuervo, C Daniel Cadena, Peter A. Hosner

Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes

The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for 80 indivi
Authors
Terry Chesser, Morton L Isler, Andres M Cuervo, C Daniel Cadena, Spencer C Galen, Laura M. Bergner, Robert C. Fleischer, Gustavo A Bravo, Daniel F Lane, Peter A. Hosner