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Publications

The following list of California Water Science Center publications includes both official USGS publications and journal articles authored by our scientists.

Filter Total Items: 1743

Risk-informed levee erosion countermeasure site selection and design in the Sacramento area part 1: Soil sampling, testing, and data processing

USACE partnered with the United States Department of Agriculture, Agricultural Research Service, United States Geological Survey, and Texas A&M University to evaluate the erodibility of the river banks and levees to inform probabilistic numerical simulations using the Bank Stability and Toe Erosion Model (BSTEM). This paper discusses the measurement of the intrinsic erosion and geotechnical proper
Authors
Todd M. Rivas, Jonathan AuBuchon, Anna Shidlovskaya, Eddy J. Langendoen, Paul A. Work, Daniel N. Livsey, Anna Timchenko, Jean-Louis Briaud

Improving groundwater model calibration with repeat microgravity measurements

Groundwater-flow models depend on hydraulic head and flux observations for evaluation and calibration. A different type of observation—change in storage measured using repeat microgravity—can also be used for parameter estimation by simulating the expected change in gravity from a groundwater model and including the observation misfit in the objective function. The method is demonstrated using new
Authors
Jeffrey Kennedy, Libby M. Kahler, Jacob E. Knight, Joshua D. Larson

Ocean connectivity drives trophic support for consumers in an intermittently closed coastal lagoon

Estuarine food webs are complex, as marine, freshwater, and terrestrial inputs combine and contribute variable amounts of organic material. Seasonal fluctuations in precipitation amplify the dynamism inherent to estuarine food webs, particularly in lagoonal estuaries, which can be seasonally closed and disconnected from the ocean in low-runoff periods (bar-built lagoons). Despite their abundance a
Authors
Matthew J. Young, Frederick V. Feyrer, Darren Fong, Rachel C. Johnson, Tamara E. C. Kraus, Veronica Larwood, Elizabeth B. Stumpner, Megan B. Young

A scalable model-independent iterative data assimilation tool for sequential and batch estimation of high dimensional model parameters and states

Ensemble-based data assimilation (DA) methods have displayed strong potential to improve model state and parameter estimation across several disciplines due to their computational efficiency, scalability, and ability to estimate uncertainty in the dynamic states and the parameters. However, a barrier to adoption of ensemble DA methods remains. Namely, there is currently a lack of available tools t
Authors
Ayman H. Alzraiee, Jeremy T. White, Matthew Knowling, Randall J. Hunt, Michael N. Fienen

Juvenile African clawed frogs (Xenopus laevis) express growth, metamorphosis, mortality, gene expression, and metabolic changes when exposed to thiamethoxam and clothianidin

Neonicotinoids (NEO) represent the main class of insecticides currently in use, with thiamethoxam (THX) and clothianidin (CLO) primarily applied agriculturally. With few comprehensive studies having been performed with non-target amphibians, the aim was to investigate potential biomarker responses along an adverse outcome pathway of NEO exposure, whereby data were collected on multiple biological
Authors
Jill Jenkins, Katherine R. Hartop, Ghadeer Bukhari, Debra E. Howton, Kelly L. Smalling, Scott Mize, Michelle Hladik, Darren Johnson, Rassa Dale, Bonnie L. Brown

Geostatistical mapping of salinity conditioned on borehole logs, Montebello Oil Field, California

We present a geostatistics-based stochastic salinity estimation framework for the Montebello Oil Field that capitalizes on available total dissolved solids (TDS) data from groundwater samples as well as electrical resistivity (ER) data from borehole logging. Data from TDS samples (n = 4924) was coded into an indicator framework based on falling below four selected thresholds (500, 1000, 3000, and
Authors
Neil Terry, Frederick Day-Lewis, Matthew K. Landon, Michael Land, Jennifer S. Stanton, John W. Lane

Dispersion and stratification dynamics in the upper Sacramento River deep water ship channel

Hydrodynamics control the movement of water and material within and among habitats, where time-scales of mixing can exert bottom-up regulatory effects on aquatic ecosystems through their influence on primary production. The San Francisco Estuary (estuary) is a low-productivity ecosystem, which is in part responsible for constraining higher trophic levels, including fishes. Many research and habita
Authors
Leah Lenoch, Paul Stumpner, Jon R. Burau, Luke C. Loken, Steven Sadro

The silence of the clams: Forestry registered pesticides as multiple stressors on soft-shell clams

Contaminants are ubiquitous in the environment, often reaching aquatic systems. Combinations of forestry use pesticides have been detected in both water and aquatic organism tissue samples in coastal systems. Yet, most toxicological studies focus on the effects of these pesticides individually, at high doses, and over acute time periods, which, while key for establishing toxicity and safe limits,
Authors
Alexandra G. Tissot, Elise F. Granek, Anne W Thompson, Michelle Hladik, Patrick W. Moran, Kaegen Scully-Engelmeyer

The triple argon isotope composition of groundwater on ten-thousand-year timescales

Understanding the age and movement of groundwater is important for predicting the vulnerability of wells to contamination, constraining flow models that inform sustainable groundwater management, and interpreting geochemical signals that reflect past climate. Due to both the ubiquity of groundwater with order ten-thousand-year residence times and its importance for climate reconstruction of the la
Authors
Alan Seltzer, John A. Krantz, Jessica Ng, Wesley R. Danskin, David Bekaert, Peter H. Barry, David L. Kimbrough, Justin T. Kulongoski, Jeffrey P. Severinghaus

A basin-scale approach to estimating recharge in the desert: Anza-Cahuilla groundwater basin, CA

The Anza-Cahuilla groundwater basin located mainly in the semi-arid headwaters of the Santa Margarita River watershed in southern California is the principle source of groundwater for a rural disadvantaged community and two Native American Tribes, the Ramona Band of Cahuilla and the Cahuilla. Groundwater in the study area is derived entirely from precipitation and managing groundwater sustainably
Authors
Michelle A. Stern, Lorraine E. Flint, Alan L. Flint, Allen H. Christensen

Synthesis of data and studies relating to Delta Smelt biology in the San Francisco Estuary, emphasizing water year 2017

In the San Francisco Estuary (SFE), the effects of freshwater flow on the aquatic ecosystem have been studied extensively over the years and remains a contentious management issue. It is especially contentious with regards to the Delta Smelt (Hypomesus transpacificus), a species endemic to the SFE that has been listed as threatened under the Federal Endangered Species Act and endangered by the Sta
Authors
Shawn Acuna, Randy Baxter, Aaron J. Bever, Larry R. Brown, Christina Burdi, Gonzalo Castillo, Louise Conrad, Steven Culberson, Lauren Damon, Jared Frantzich, Lenny Grimaldo, Bruce Hammock, April Hennessy, James A. Hobbs, Shruti Khanna, Peggy W. Lehman, Michael L. MacWilliams, Brian Mahardja, Andrew A. Schultz, Steven B. Slater, Ted Sommer, Swee Teh, Janet Thompson

Experiences in LP-IoT: EnviSense deployment of remotely reprogrammable environmental sensors

The advent of Low Power Wide Area Networks (LPWAN) has improved the feasibility of wireless sensor networks for environmental sensing across wide areas. We have built EnviSense, an ultra-low power environmental sensing system, and deployed over a dozen of them across two locations in Northern California for hydrological monitoring applications with the U.S. Geological Survey (USGS). This paper det
Authors
Reese Grimsley, Mathieu D. Marineau, Robert A. Iannucci
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