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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41771

Perspectives on challenges and opportunities at the restoration-policy interface in the U.S.A.

As we advance into the United Nations Decade on Ecosystem Restoration, understanding the relationship between science, management, and policy is increasingly important given the paucity of research evaluating the ability of existing policy to address contemporary environmental challenges. Despite their inherent interdependence, restoration ecology as a scientific discipline, ecological restoration
Authors
Ella M. Samuel, Rachel M. Mitchell, Daniel E. Winkler

Occurrence of a reproducing wild population of Channa aurolineata (Pisces: Channidae) in the Manatee River drainage, Florida

We report on the discovery of a wild, reproducing population of Channa aurolineata (Pisces: Channidae) in west-central Florida (USA), and first documented occurrence of snakeheads in the Gulf Coast region. Channa aurolineata is a large, predatory fish of the bullseye snakehead “Marulius group” species complex from Asia. Adult and juvenile specimens were captured in June 2020 in a 1.8-hectare pond
Authors
Leo Nico, Matthew Neilson, Robert H. Robins, John M. Pfeiffer, Matthew Kail, Zachary S. Randall, Eric A. Johnson

Gaining decision-maker confidence through community consensus: Developing environmental DNA standards for data display on the USGS Nonindigenous Aquatic Species database

To advance national efforts for the detection and biosurveillance of aquatic invasive species (AIS), we employed a community consensus process to enable the incorporation of environmental DNA (eDNA) detection data into the U.S. Geological Survey’s (USGS) Nonindigenous Aquatic Species (NAS) database (https://nas.er.usgs.gov/eDNA/). Our goal was to identify minimum standards and best practices for t
Authors
Jason Ferrante, Wesley M. Daniel, Jonathan (Contractor) Adam Freedman, Katy E. Klymus, Matthew Neilson, Yale Passamaneck, Christopher B. Rees, Adam J. Sepulveda, Margaret Hunter

Juvenile green sturgeon (Acipenser medirostris) movement during autumn and winter in the lower Sacramento River, California, 2016–20

A collaborative acoustic telemetry study was conducted to describe behavior and movement patterns of juvenile green sturgeon (Acipenser medirostris) in the lower Sacramento River, California during 2016–19. For the study, juvenile green sturgeon were collected, tagged, and released in the Sacramento River between river kilometer (rkm) 467 and rkm 419 near Red Bluff, California. Telemetry monitorin
Authors
Amy C. Hansen, Robert D. Chase, Tobias J. Kock, Russell W. Perry, Josh J. Gruber, William R. Poytress

Mismatch between temperature and discharge disrupts spawning cues in a fluvial specialist, blue sucker Cycleptus elongatus

Seasonal movements cued by environmental variables are a critical component of riverine fish life history. Life-history events for species such as blue sucker Cycleptus elongatus are likely cued by discharge and temperature and may be disrupted if those life-history events and environmental regimes are mismatched. However, this effect may be dependent upon the habitat occupied when environmental c
Authors
Matthew Ross Acre, Timothy B. Grabowski, Daniel J. Leavitt, Nathan G. Smith, Allison A. Pease, Preston T. Bean, Dakus Geeslin

Know what you don't know: Embracing state uncertainty in disease-structured multistate models

Hidden Markov models (HMMs) are broadly applicable hierarchical models that derive their utility from separating state processes from observation processes yielding the data. Multistate models such as mark–recapture and dynamic multistate occupancy models are HMMs frequently used in ecology. In their early formulations, states, such as pathogen infection status, were assumed to be perfectly observ
Authors
Matthijs Hollanders, Andy Royle

A characterization of the deep-sea coral and sponge community along the California, Oregon, and Washington coasts using a remotely operated vehicle on the EXPRESS 2019 expedition

NOAA’s Deep-Sea Coral Research Technology Program (DSCRTP) began a 4-year funding initiative for the U.S. West Coast in 2018. The goals of the West Coast Deep-Sea Coral Initiative were to: 1) gather baseline information on DSCS in areas subject to fishing regulation changes prior to the implementation of Amendment 28; 2) improve our understanding of known DSCS bycatch “hot spots”; and 3) explore a
Authors
Tom Laidig, Diana Watters, Nancy G. Prouty, Meredith Everett, Lizzie Duncan, Liz Clarke, Chris Caldow, Jill Bourque, Jennifer McClain Counts, Amanda Demopoulos

Are canned sardines or dry cat food more effective as bait for capturing Northwestern Pond Turtles (Actinemys marmorata) and Red-eared Sliders (Trachemys scripta elegans)?

During an occupancy study of Northwestern Pond Turtles (Actinemys marmorata) and Red-eared Sliders (Trachemys scripta elegans) in California’s Sacramento Valley in 2018, we tested the relative effectiveness of 2 bait types: sardines packed in soybean oil and Meow Mix® Original Choice dry cat food. We sampled 116 sites with 2 traps each: one baited with sardines and one baited with dry cat food. Sa
Authors
Alexandria M Fulton, Jonathan P. Rose, Brian J. Halstead

An evaluation of transmitter effects on adult and juvenile Common Terns using leg-loop harness attachments

Marking birds with transmitters allows for the collection of data that are critical for fully understanding avian life history, but researchers must also be confident that performing such studies is as safe as possible for transmittered individuals. While much could be learned from tracking juveniles across dependency periods and first migration, doing so would require a harness-based attachment m
Authors
Evan J Buck, Jeffery D. Sullivan, Claire S. Teitelbaum, David F. Brinker, Peter C. McGowan, Diann Prosser

Observed and forecasted changes in land use by polar bears in the Beaufort and Chukchi Seas, 1985–2040

Monitoring changes in the distribution of large carnivores is important for managing human safety and supporting conservation. Throughout much of their range, polar bears (Ursus maritimus) are increasingly using terrestrial habitats in response to Arctic sea ice decline. Their increased presence in coastal areas has implications for bear-human conflict, inter-species interactions, and polar bear h
Authors
Karyn D. Rode, David C. Douglas, Todd C. Atwood, George M. Durner, Ryan R. Wilson, Anthony M. Pagano

Evolutionary ecology of fire

Fire has been an ecosystem process since plants colonized land over 400 million years ago. Many diverse traits provide a fitness benefit following fires, and these adaptive traits vary with the fire regime. Some of these traits enhance fire survival, while others promote recruitment in the postfire environment. Demonstrating that these traits are fire adaptations is challenging, since many arose e
Authors
Jon Keeley, Juli G. Pausas

Modeled distribution shifts of North American birds over four decades based on suitable climate alone do not predict observed shifts

As climate change alters the global environment, it is critical to understand the relationship between shifting climate suitability and species distributions. Key questions include whether observed changes in population abundance are aligned with the velocity and direction of shifts predicted by climate suitability models and if the responses are consistent among species with similar ecological tr
Authors
Qiongyu Huang, Brooke L. Bateman, Nicole Michel, Anna M. Pidgeon, Voelker C. Radeloff, Patrician Heglund, Andrew J. Allstadt, Jesse Wong, John R. Sauer