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Publications

This list of Water Resources Mission Area publications includes both official USGS publications and journal articles authored by our scientists. A searchable database of all USGS publications can be accessed at the USGS Publications Warehouse.

Filter Total Items: 18418

Exploring the potential value of satellite remote sensing to monitor chlorophyll-a for U.S. lakes and reservoirs

Assessment of chlorophyll-a, an algal pigment, typically measured by field and laboratory in situ analyses, is used to estimate algal abundance and trophic status in lakes and reservoirs. In situ-based monitoring programs can be expensive, may not be spatially, and temporally comprehensive and results may not be available in the timeframe needed to make some management decisions, but can be more a
Authors
Michael Papenfus, Blake Schaeffer, Amina Pollard, Keith Loftin

Ecological risk assessment of environmental stress and bioactive chemicals to riverine fish populations: An individual-based model of smallmouth bass Micropterus dolomieu

Ecological risk assessments play an important role in environmental management and decision-making. Although empirical measurements of the effects of habitat changes and chemical exposure are often made at molecular and individual levels, environmental decision-making often requires the quantification of management-relevant, population-level outcomes. In this study, we generalized a modeling frame
Authors
Yan Li, Vicki S. Blazer, Luke R. Iwanowicz, Megan K. Schall, Kelly Smalling, Donald E. Tillitt, Tyler Wagner

Changing nitrogen inputs to the northern San Francisco Estuary: Potential ecosystem responses and opportunities for investigation

Anthropogenic activities have resulted in elevated ambient nitrogen (N) and phosphorus (P) concentrations in many regions of the Sacramento-San Joaquin Delta and Suisun Bay (northern San Francisco Estuary, (nSFE). The Sacramento Regional wastewater treatment plant (SRWTP WWTP) currently acts as the largest N point source to the system, discharging 13,000-15,000 kg/d of ammonium-N (NH4) near the nS
Authors
David Senn, Tamara E. C. Kraus, Amy Richey, Brian A. Bergamaschi, Larry R. Brown, Louise Conrad, Christopher A. Francis, Wim Kimmerer, Raphael Kudela, Timothy G. Otten, Alexander E. Parker, April Robinson, Anke Mueller-Solger, Dylan Stern, Janet Thompson

Interactive PHREEQ-N-AMDTreat water-quality modeling tools to evaluate performance and design of treatment systems for acid mine drainage

The PHREEQ-N-AMDTreat aqueous geochemical modeling tools described herein simulate changes in pH and solute concentrations resulting from passive and active treatment of acidic or alkaline mine drainage (AMD). The “user-friendly” interactive tools, which are publicly available software, utilize PHREEQC equilibrium aqueous and surface speciation models and kinetics models for O2 ingassing and CO2 o
Authors
Charles A. Cravotta

Decreases in aluminum toxicity and mortality of caged brook trout in Adirondack Mountain Streams

Mortality of juvenile brook trout and water chemistry were characterized in six western Adirondack streams in northern New York State during spring 2015, 2016, and 2017 and compared with results from comparable tests done between 1980 and 2003 in many of the same streams to assess temporal changes in inorganic monomeric aluminum (Ali) concentrations, Ali-toxicity, and the role of Ali-exposure dura
Authors
Barry P. Baldigo, Scott D. George

colorspace: A toolbox for manipulating and assessing colors and palettes

The R package colorspace provides a flexible toolbox for selecting individual colors or color palettes, manipulating these colors, and employing them in statistical graphics and data visualizations. In particular, the package provides a broad range of color palettes based on the HCL (hue-chroma-luminance) color space. The three HCL dimensions have been shown to match those of the human visual syst
Authors
Achim Zeileis, Jason C. Fisher, Kurt Hornik, Ross Ihaka, Claire D. McWhite, Paul Murrell, Reto Stauffer, Claus O. Wilke

Drivers and projections of ice phenology in mountain lakes in the western United States

Climate change is causing rapid warming and altered precipitation patterns in mountain watersheds, both of which influence the timing of ice breakup in mountain lakes. To enable predictions of ice breakup in the future, we analyzed a dataset of mountain lake ice breakup dates derived from remote sensing and historical downscaled climate data. We evaluated drivers of ice breakup, constructed a pred
Authors
Timothy J Caldwell, Sudeep Chandra, Thomas Albright, Adrian Harpold, Thomas Dills, Jonathan Greenberg, Steven Sadro, Michael D. Dettinger

Lateral carbon exports from drained peatlands: An understudied carbon pathway in the Sacramento-San Joaquin Delta, California

Degradation of peatlands via drainage is increasing globally and destabilizing peat carbon (C) stores. The effects of drainage on the timing and magnitude of lateral C losses from degraded peatlands remains understudied. We measured spatial and temporal variability in lateral C exports from three drained peat islands in the Sacramento‐San Joaquin Delta in California across the 2017 and 2018 water
Authors
Christina M. Richardson, Joseph K. Fackrell, Tamara E. C. Kraus, Megan B. Young, Adina Paytan

Towards the understanding of hydrogeochemical seismic responses in karst aquifers: A retrospective meta-analysis focused on the Apennines (Italy)

Earthquakes are known to affect groundwater properties, yet the mechanisms causing chemical and physical aquifer changes are still unclear. The Apennines mountain belt in Italy presents a rich literature of case studies documenting hydrogeochemical response to seismicity, due to the high frequency of seismic events and the presence of different regional aquifers in the area. In this study, we synt
Authors
Gilberto Binda, Andrea Pozzi, Alessandro Michetti, Paula Noble, Michael R. Rosen

Geochemistry and age of groundwater in the Williston Basin, USA: Assessing potential effects of shale-oil production on groundwater quality

Thirty water wells were sampled in 2018 to understand the geochemistry and age of groundwater in the Williston Basin and assess potential effects of shale-oil production from the Three Forks-Bakken petroleum system (TBPS) on groundwater quality. Two geochemical groups are identified using hierarchical cluster analysis. Group 1 represents the younger (median 4He = 21.49 × 10−8 cm3 STP/g), less chem
Authors
Peter B. McMahon, Joel M. Galloway, Andrew Hunt, Kenneth Belitz, Bryant Jurgens, Tyler D. Johnson

Multiple-well monitoring site adjacent to the North and South Belridge Oil Fields, Kern County, California

The U.S. Geological Survey (USGS), in cooperation with the California State Water Resources Control Board, is evaluating several questions about oil and gas development and groundwater resources in California, including (1) the location of groundwater resources; (2) the proximity of oil and gas operations to groundwater and the geologic materials between them; (3) evidence (or no evidence) of flui
Authors
Rhett R. Everett, Anthony A. Brown, Janice M. Gillespie, Adam Kjos, Nicole C. Fenton

Critical shifts in trace metal transport and remediation performance under future low river flows

Exceptionally low river flows are predicted to become more frequent and more severe across many global regions as a consequence of climate change. Investigations of trace metal transport dynamics across streamflows reveal stark changes in water chemistry, metal transformation processes, and remediation effectiveness under exceptionally low-flow conditions. High spatial resolution hydrological and
Authors
Patrick A. Byrne, Patrizia Onnis, Robert L. Runkel, Ilaria Frau, Sarah F. L. Lynch, Paul Edwards