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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 171126

READI-Net—Providing tools for the early detection and management of aquatic invasive species

OverviewEarly detection of biological threats, such as invasive species, increases the likelihood that control efforts will be successful and cost-effective. Environmental deoxyribonucleic acid (eDNA) sampling is an established method for the efficient and sensitive early detection of new biological threats. The Rapid eDNA Assessment and Deployment Initiative & Network (READI-Net) is a project des
Authors
Lisa McKeon, Todd Wojtowicz

U.S. Geological Survey Northern Rocky Mountain Science Center science highlights for fiscal year 2023

The U.S. Geological Survey (USGS) Northern Rocky Mountain Science Center is based in Bozeman, Montana, and has field offices in Glacier National Park, Mont.; Missoula, Mont.; and Knoxville, Tennessee. Our scientists respond to the natural resource management needs of Federal, Tribal, and State partners—directly engaging in the coproduction and application of integrated, interdisciplinary science—a
Authors
Todd Wojtowicz

Interdisciplinary science approach for harmful algal blooms (HABs) and algal toxins—A strategic science vision for the U.S. Geological Survey

Executive SummaryAlgal blooms in water, soils, dusts, and the environment have captured national attention because of concerns associated with exposure to algal toxins for humans and animals. Algal blooms naturally occur in all surface-water types and are important primary producers for aquatic ecosystems. However, excessive algae growth can be associated with many harmful effects ranging from aes
Authors
Victoria G. Christensen, Christopher J. Crawford, Robert J. Dusek, Michael J. Focazio, Lisa Reynolds Fogarty, Jennifer L. Graham, Celeste A. Journey, Mari E. Lee, James H. Larson, Sarah M. Stackpoole, Viviana Mazzei, Emily J. Pindilli, Barnett A. Rattner, E. Terrence Slonecker, Kristen B. McSwain, Timothy J. Reilly, Ashley E. Lopez

Capturing potential: Leveraging grass carp behavior Ctenopharyngodon idella for enhanced removal

Effective management of invasive species benefits from a comprehensive understanding of the species’ behavior and interactions with the invaded system. We investigated temporal dynamics of telemetry detections and the potential utility of a traitor approach for informing response efforts to the invasive grass carp (Ctenopharyngodon idella) population in the Sandusky River, a major tributary to Lak
Authors
Matthew Ross Acre, Tyler Michael Hessler, Sophia Marie Bonjour, James Roberts, Scott F. Colborne, Travis O. Brenden, Lucas R. Nathan, Dustin Broaddus, Christopher S. Vandergoot, Christine M. Mayer, Song S. Qian, Robert D. Hunter, Ryan E. Brown, Robin Calfee

Peak streamflow trends in Michigan and their relation to changes in climate, water years 1921–2020

This study characterizes hydroclimatic variability and change in peak streamflow and daily streamflow in Michigan from water years 1921 through 2020. Four analysis periods were examined: the 100-year period from water year 1921 through 2020, the 75-year period from water year 1946 through 2020, the 50-year period from water year 1971 through 2020, and the 30-year period from water year 1991 throug
Authors
Sara B. Levin

Declining groundwater storage expected to amplify mountain streamflow reductions in a warmer world

Groundwater interactions with mountain streams are often simplified in model projections, potentially leading to inaccurate estimates of streamflow response to climate change. Here, using a high-resolution, integrated hydrological model extending 400 m into the subsurface, we find groundwater an important and stable source of historical streamflow in a mountainous watershed of the Colorado River.
Authors
Rosemary W.H. Carroll, Richard G. Niswonger, Craig Ulrich, Charuleka Varadharajan, Erica Siirila-Woodburn, Kenneth H. Williams

Browsing the literature

For this edition of Browsing the Literature, we have two new papers from Rangeland Ecology & Management, a series of basic ecology papers with an international scope from journals such as the Proceedings of the National Academy of Sciences (USA), Science, and Nature, and several papers advancing our understanding of drought and carbon at global scales. Additionally, several papers on sagebrush-st
Authors
Matthew Germino

Does the extent of glacial cover across watersheds and discharge periods affect dietary resource use of nearshore fishes in the Northern Gulf of Alaska?

Northern high-latitude glaciers impact nearshore marine ecosystems through the discharge of cold and fresh waters, including nutrients and organic matter. Fishes are important integrators of ecosystem processes and hold key positions in the transfer of energy to higher trophic positions in such systems. This study used a natural gradient in space and time, including watershed glacial cover (0–60%)
Authors
Lindsey Stadler, Kristen Gorman, Vanessa R. von Biela, Andrew C. Seitz, Katrin Iken

How to select an objective function using information theory

In machine learning or scientific computing, model performance is measured with an objective function. But why choose one objective over another? According to the information-theoretic paradigm, the “best” objective function is whichever minimizes information loss. To evaluate different objectives, transform them into likelihoods. The ratios of these likelihoods represent how strongly we should pr
Authors
Timothy O. Hodson, Thomas M. Over, Smith Tyler, Lucy A. Marshall

Genome-wide association analysis of the resistance to infectious hematopoietic necrosis virus in two rainbow trout aquaculture lines confirms oligogenic architecture with several moderate effect quantitative trait loci

Infectious hematopoietic necrosis (IHN) is a disease of salmonid fish that is caused by the IHN virus (IHNV), which can cause substantial mortality and economic losses in rainbow trout aquaculture and fisheries enhancement hatchery programs. In a previous study on a commercial rainbow trout breeding line that has undergone selection, we found that genetic resistance to IHNV is controlled by the ol
Authors
Yniv Palti, Roger L. Vallejo, Maureen K. Purcell, Guangtu Gao, Kristy L. Shewbridge, Roseanna L. Long, Christopher Setzke, Breno O. Fragomeni, Hao Cheng, Kyle E. Martin, Kerrry A. Naish

Magnitude and frequency of floods in the Coastal Plain region of Louisiana, 2016

To improve flood-frequency estimates for rural streams in the Coastal Plain region of Louisiana, generalized least-squares regression techniques were used to relate corresponding annual exceedance probability streamflows for 211 streamgages in the region to a suite of explanatory variables that include physical, climatic, pedologic, and land-use characteristics of the streamgage drainage area. The
Authors
Paul A. Ensminger, Daniel M. Wagner, Amanda Whaling

Biodiversity loss reduces global terrestrial carbon storage

Natural ecosystems store large amounts of carbon globally, as organisms absorb carbon from the atmosphere to build large, long-lasting, or slow-decaying structures such as tree bark or root systems. An ecosystem’s carbon sequestration potential is tightly linked to its biological diversity. Yet when considering future projections, many carbon sequestration models fail to account for the role biodi
Authors
Sarah R. Weiskopf, Forest Isbell, Maria Isabel Arce-Plata, Moreno Di Marco, Mike Harfoot, Justin A. Johnson, Susannah B. Lerman, Brian W. Miller, Toni Lyn Morelli, Akira S. Mori, Ensheng Weng, Simon Ferrier