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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

A climate-mediated shift in the estuarine habitat mosaic limits prey availability and reduces nursery quality for juvenile salmon

The estuarine habitat mosaic supports the reproduction, growth, and survival of resident and migratory fish species by providing a diverse portfolio of unique habitats with varying physical and biological features. Global climate change is expected to result in increasing temperatures, rising sea levels, and changes in riverine hydrology, which will have profound effects on the extent and composit
Authors
Melanie J. Davis, Isa Woo, Christopher S. Ellings, Sayre Hodgson, David Beauchamp, Glynnis Nakai, Susan E. W. De La Cruz

Carnivores in color: Pelt color patterns among carnivores in Idaho

Pelt color serves many functions from signaling to crypsis to thermoregulation and its purpose has been a lively source of debate in biology for over a century. Determining the effects of both habitat and human influences on pelt color patterns can be difficult. We made novel use of a multispecies occupancy model by defining “pelt color” as “species.” We then used this model to test predictions an
Authors
David Edward Ausband, Jessica M. Krohner

Cooperative Fish and Wildlife Research Units program — 2021 year in review

Established in 1935, the Cooperative Fish and Wildlife Research Units program is a unique cooperative partnership among State fish and wildlife agencies, universities, the Wildlife Management Institute, the U.S. Fish and Wildlife Service, and the U.S. Geological Survey. Designed to meet the scientific needs of natural resource management agencies and the necessity for trained professionals in the
Authors
Dawn E. Childs

Greater than the sum of its parts: Computationally flexible Bayesian hierarchical modeling

We propose a multistage method for making inference at all levels of a Bayesian hierarchical model (BHM) using natural data partitions to increase efficiency by allowing computations to take place in parallel form using software that is most appropriate for each data partition. The full hierarchical model is then approximated by the product of independent normal distributions for the data componen
Authors
Devin S. Johnson, Brian M. Brost, Mevin Hooten

Patterns of parental care and movement in divided broods of golden-winged warblers

Post-fledging brood division is a poorly understood, yet widespread suite of avian behaviours that includes both division of parental care and spatial division of a brood. For most species, the differences in parental care between adult males and females and the behavioural mechanisms explaining spatial patterns of brood division are unknown. We studied brood division in golden-winged warblers Ver
Authors
Sean M. Peterson, Henry M. Streby, Gunnar R. Kramer, Jared M. Feura, David Andersen

Dual resistance to Flavobacterium psychrophilum and Myxobolus cerebralis in rainbow trout (Oncorhynchus mykiss, Walbaum)

Aquatic pathogens are a major concern for fish hatchery production, fisheries management, and conservation, and disease control needs to be addressed. Two important salmonid pathogens are Myxobolus cerebralis and Flavobacterium psychrophilum that cause whirling disease and bacterial coldwater disease (BCWD), respectively. Innate disease resistance is a potential option for reducing disease-related
Authors
Brian W. Avila, Dana L. Winkelman, Eric R. Fetherman

Many avenues for spatial personality research: a response to comments on Stuber et al. (2022)

We are grateful for the thought-provoking and forward-looking commentaries (Dingemanse et al. 2022; Mabry 2022; Spiegel and Pinter-Wollman 2022; Vander Wal et al. 2022) in response to our meta-analysis of evidence for consistent among-individual differences in animals’ spatial behaviors (Stuber et al. 2022). A clear consensus is that our demonstration of the prevalence of repeatability across spat
Authors
Erica Francis Stuber, Ben Carlson, Brett Jesmer

Power analysis for detecting the effects of best management practices on reducing nitrogen and phosphorus fluxes to the Chesapeake Bay watershed, USA

In 2010 the U.S. Environmental Protection Agency established the Total Maximum Daily Load (TMDL) which is a “pollution diet” that aims to reduce the amount of nitrogen and phosphorus entering the Chesapeake Bay, the largest estuary in the United States, by 25 and 24% percent, respectively. To achieve this goal the TMDL requires the implementation of Best Management Practices (BMPs), which are acce
Authors
Paul McLaughlin, Richard Alexander, Joel Blomquist, Olivia H. Devereux, Gregory Noe, Kelly L. Smalling, Tyler Wagner

Stage-specific environmental correlates of reproductive success in Boreal Toads (Anaxyrus boreas boreas)

Compensatory recruitment can facilitate the persistence of populations experiencing high adult mortality. Because early life-stages of many taxa, including amphibians, are difficult to mark and recapture, sources of variation in survival at these stages often are unknown, which creates barriers to improving in situ recruitment rates. We leveraged count data and open N-mixture models to examine the
Authors
Gabriel M. Barrile, Annika W. Walters, Anna D. Chalfoun

Nekton community dynamics within active and inactive deltas in a major river estuary: Potential implications for altered hydrology regimes

High fisheries production within estuaries is associated with coastal upwelling, tidal mixing, and land-based runoff facing increasing impacts from climate and human activities. Active river deltas receive large riverine inflows compared to inactive river deltas, providing contrasting estuaries to compare impacts of river inflow on estuarine nekton. We quantified nekton assemblages and stable isot
Authors
Caleb B. Taylor, John Andrew Nyman, Megan K. La Peyre

Increased juvenile native fish abundance following a major flood in an Arizona river

Spring floods trigger spawning in many native fishes of the desert Southwest (USA), but less is known about fish community response when native fishes are rare. Here, we document change to native and nonnative fish captures and instream habitat features following a decade-high flooding event (2019) in the Verde River (AZ) where native fish captures were rare in the years pre-flood. Using prepositi
Authors
Christopher J. Jenney, Zach C. Nemec, Larissa N. Lee, Scott A. Bonar

Estimating wolf abundance from cameras

Monitoring the abundance of rare carnivores is a daunting task for wildlife biologists. Many carnivore populations persist at relatively low densities, public interest is high, and the need for population estimates is great. Recent advances in trail camera technology provide an unprecedented opportunity for biologists to monitor rare species economically. Few studies, however, have conducted rigor
Authors
David Edward Ausband, Paul M. Lukacs, Mark A. Hurley, Shane Roberts, Kaitlyn M. Strickfaden, Anna K. Moeller