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Data

Below are data or web applications associated with the Molecular Ecology Laboratory.

Filter Total Items: 32

Genetic Microsatellite Data from Sorex, Based on Holarctic Sampling

This data set describes nuclear microsatellite genotypes derived from 17 autosomal loci (Sug001, Sug002, Sug003, Sug006, Sug007, Sug008, Sug009, Sug010, Sug011, Sug012, Sug019, Sug021, Sug022, Sug023, Sug024, Sug029, Sug038) in shrews, Sorex spp.

Genetic Data from Cooper's Hawks (Accipiter cooperii), North America

This data set describes nuclear microsatellite genotypes derived from six autosomal loci (AgCA222, Age7.1JT, BV13, BV20, NVH206, NVH195-2) in Cooper's Hawks. Samples originated from blood samples collected from live trapped birds.

Genomic Data from Ptarmigan and Grouse, Alaska

This data set provides sample data and NCBI accession information for genomic sequencing of ptarmigan and grouse from Alaska.

Blood Parasite Infection, Body Mass, and Survival Data from Emperor Geese (Anser canagicus), Yukon-Kuskokwim Delta, Alaska, 2006-2016

This dataset provides two tables of blood parasite infection data collected from Emperor Geese (Anser canagicus) on Yukon-Kuskokwim Delta, Alaska, 2006-2016. Three genera of blood parasites (Leucocytozoon, Haemoproteus, Plasmodium) were detected by molecular sequencing of a 479 bp fragment of the Cytochrome-b gene. The data provided in the tables are: 1) age, sex, mass, infection status, and NCBI

Genetic Data from Wolverine (Gulo gulo) of North America

These data are comprised of two tables, one table containing wolverine (Gulo gulo) sample and genetic information for 20 microsatellite loci (Gg10-1, Gg25, Gg37-2, Gg42-1, Gg192-1, Gg443, Gg452, Gg454, Gg465, Gg471, Gg473, Gg-3-1, Gg-4, Gg-7-1, Ggu_216-1, Lut604, Ma-3-1, Mvis075, Tt-1, and Tt-4) and genetic sex determination results from North America and one Russian wolverine. All samples were ob

Detection of Seagrass Pathogens using Environmental DNA (eDNA), North Pacific, 2016-Present

This data set is comprised of one table with sampling information and NCBI BioProject accession numbers for sequence information of this amplicon-based study targeting Labyrinthula, Phytophthora, and Halophytophthora of known pathogenic and non-pathogenic [to eelgrass (Zostera marina)] strains from eDNA samples. eDNA samples included water, sediment, and eelgrass from Notsuke Wan (Cove) Japan, Saf

Genomic Data of North American Sea Ducks

This data set describes accession numbers for nucleotide sequence data derived from whole mitochondrial genome and double digest restriction-site associated DNA (ddRAD).

Sequence Information from the Mitogenome and Four Nuclear Genes from Holarctic Ermine (Mustela spp.)

These data are comprised of two tables, one of primers used for PCR amplifications and the other containing North American (n = 105), Mongolian (n = 1) and Russian (n = 5) ermine (Mustela spp.) sample accessions and NCBI GenBank DNA sequence accessions for mitogenomes and four nuclear genes (agouti signaling protein [ASIP], feline sarcoma [FES], growth hormone receptor [GHR], and serotonin recepto

Rusty Blackbird (Euphagus carolinus) Genetic Data, North America

This data set provides NCBI accession numbers for nucleotide sequence data derived from a mitochondrial DNA locus (control region) and double digest restriction-site associated DNA (ddRAD).

Genetic Data from Barrow's Goldeneye and Common Goldeneye

This data set describes nuclear microsatellite genotypes derived from eight autosomal loci (Aph02, Aph11, Aalµ1, Sfiµ4, Smo4, Smo7, Smo12, and Sfiµ8) and accession numbers for double digest restriction-site associated DNA (ddRAD) sequences.

Genetic Data for Merlin (Falco columbarius) and Cross-Species Microsatellite Amplification in Select Falco Species, North America

This data set contains allele sizes for 8 previously published and 16 novel microsatellite loci, and one microsatellite redesigned for amplification in Merlins (Falco columarius) associated with circadian clock control and polymorphism that has been associated with juvenile dispersal and migratory behavior in some avian species for Merlin (Falco columbarius) from North America (n=21). Allele sizes

Genetic Data from Three Accipiter Species, North America, 1996-2014

This data set provides sample collection information and genetic data used to identify relationships between groups of North American accipiters, including one hybrid. Genetic data includes gender identification, nuclear and mtDNA sequence markers, and microsatellite genotypes derived from 20 autosomal loci (Age1302, Age1303, Age1304, Age1305, Age1306, Age1307, Age1308, Age1309, Age1310, Age1311,