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Data

Below are data or web applications associated with the Molecular Ecology Laboratory.

Filter Total Items: 32

Shrew (Sorex sp.) Gut Contents Identified by DNA Metabarcoding, North America, 1968-2016

This data package contains four tables related to helminths and bacteria identified in the guts of North American shrews (Genus: Sorex). Tables include: two tables of specimen information about each shrew, such as species, museum collection identification, and NCBI accession IDs; one table of NBCI GenBank accession numbers of previously identified DNA sequences used in this study to design the hel

Metabarcoding of Feces of Pacific Walruses and Autosomal DNA Sequence Data of Marine Invertebrates, 2012-2015, Alaska

This data set describes nucleotide sequence data derived from 18S ribosomal DNA amplified in two fragments. A total of 87 feces from Pacific walrus and 57 marine invertebrates were examined for this study. Samples were collected from the Bering Sea and Chukchi Sea, Alaska. Samples used in the study originated from feces or muscle samples collected in the field from ice floes or benthic van Veen gr

Genetic Data From Nesting Steller's Eiders (Polysticta stelleri), Near Utqiagvik, Alaska, 1995-2016

This data set is comprised of one table with Steller's Eider sample information and allele sizes for 6 microsatellite loci (Sfiµ3, Sfiµ4, Sfiµ10, Sfiµ11, Bcaµ11, Smo10).

DNA Microsatellite Markers for Northern Fulmar (Fulmaris glacialis) and Cross-species Amplification in Select Seabird Species

This data set is comprised of one table with sampling information and allele sizes for 69 individual Northern Fulmars (Fulmarus glacialis) from Chagulak Island, Alaska and Hafnarey Island, Iceland. Fulmar allele sizes are provided for 10 previously published and 26 novel microsatellite loci. Additionally, allele sizes for the 26 microsatellite loci developed in this study are included for Arctic T

Spectacled Eider (Somateria fischeri) Microsatellite and Mitochondrial DNA Data, 2014-2018, Alaska and Russia

This data set describes nuclear microsatellite genotypes derived from ten autosomal loci (Aph8, Aph16, Cmo7, Cmo9, Hhi5, Sfi10, Smo4, Smo6, Smo8, Smo12) and nucleotide sequence data derived from one mitochondrial DNA locus (control region). A total of 262 Spectacled Eiders were examined for this study. Samples were collected at Indigirka and Chaun River Deltas, Russia, and Yukon-Kuskokwim Delta, U

Development of Single Nucleotide Polymorphisms (SNPs) in Greater-White Fronted Geese (Anser albifrons) for genetic stock identification on wintering grounds, 2019

This data set contains a description of 3 mitochondrial DNA and 93 nuclear DNA Single Nucleotide Polymorphism (SNP) loci and sequence information developed through double digest restriction-site associated DNA sequencing (ddRADseq) techniques for Greater White-Fronted Goose (Anser albifrons) that winter in California.

Hawaiian Coot (Fulica alai) and Hawaiian Gallinule (Gallinula galeata sandvicensis) Microsatellite and Mitochondrial DNA Data, 2014-2016, Oahu, Kauai, and Molokai, Hawaii

This data set describes nuclear microsatellite genotypes derived from twenty-one autosomal loci (Fal02, Fal04, Fal07, Fal08, Fal10, Fal12, Fal14-1, Fal16, Fal 17, Fal19, Gch03, Gch06, Gch07, Gch12, Gch13, Gch14, Gch17, Gch19, Pho110, KiRa9 - 1, and KiRa10) and nucleotide sequence data derived from two mitochondrial DNA loci (control region and NADH dehydrogenase 2). Samples were collected on Oahu,

Greater White-Fronted Goose Genetic Data, Circumpolar, 1988-2009

This data set describes nuclear microsatellite genotypes derived from eight autosomal loci (BCA6, BCA9, BCA11, BCA5, CRG, OXY13, TSP1.20.09 and TSP1.20.46) and a 366 base pair portion of the mitochondrial control region. A total of 665 Greater White-fronted Geese were examined by genotyping and 518 by sequencing with samples coming from its circumpolar range representing multiple flyways (Midconti