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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

The fishery resources of the Mississippi River: A model for conservation and management

The Mississippi River is a multijurisdictional and multiuse resource that has been variously altered and is foremost managed for navigation and flood control throughout much of its 3,734‐km passage from its origin at Lake Itasca, Minnesota, to its outlet at the Gulf of Mexico. Despite alterations summarized herein, the native fish fauna remains largely intact and only five nonnative species have c
Authors
Harold L. Schramm

Differences in human versus lightning fires between urban and rural areas of the boreal forest in interior Alaska

In western North America, the carbon-rich boreal forest is experiencing warmer temperatures, drier conditions and larger and more frequent wildfires. However, the fire regime is also affected by direct human activities through suppression, ignition, and land use changes. Models are important predictive tools for understanding future conditions but they are based on regional generalizations of wild
Authors
Monika Calef, Anna Varvak, A. David McGuire

Hydrological responses to channelization and the formation of valley plugs and shoals

Rehabilitation of floodplain systems focuses on restoring interactions between the fluvial system and floodplain, however, there is a paucity of information on the effects of valley plugs and shoals on floodplain hydrological processes. We investigated hydrologic regimes in floodplains at three valley plug sites, two shoal sites, and three unchannelized sites. Valley plug sites had altered surface
Authors
Aaron R. Pierce, Sammy L. King

Examining spatial patterns of selection and use for an altered predator guild

Anthropogenic disturbances have altered species’ distributions potentially impacting interspecific interactions. Interference competition is when one species denies a competing species access to a resource. One mechanism of interference competition is aggression, which can result in altered space-use of a subordinate species due to the threat of harm, otherwise known as a ‘landscape of fear’
Authors
John F. Organ, Matthew Mumma, Joseph D. Holbrook, Nathaniel D. Rayl, Christopher J. Zieminski, Todd K. Fuller, Shane P. Mahoney, Lisette P. Waits

Organizing the pantry: cache management improves quality of overwinter food stores in a montane mammal

Many mammals create food stores to enhance overwinter survival in seasonal environments. Strategic arrangement of food within caches may facilitate the physical integrity of the cache or improve access to high-quality food to ensure that cached resources meet future nutritional demands. We used the American pika (Ochotona princeps), a food-caching lagomorph, to evaluate variation in haypile (cache
Authors
Rhiannon P. Jakopak, L. Embere Hall, Anna D. Chalfoun

Identifying species conservation strategies to reduce disease-associated declines

Emerging infectious diseases (EIDs) are a salient threat to many animal taxa, causing local and global extinctions, altering communities and ecosystem function. The EID chytridiomycosis is a prominent driver of amphibian declines, which is caused by the fungal pathogen Batrachochytrium dendrobatidis (Bd). To guide conservation policy, we developed a predictive decision-analytic model that combines
Authors
Brian D. Gerber, Sarah J. Converse, Erin L. Muths, Harry J. Crockett, Brittany A. Mosher, Larissa L. Bailey

Tagging effects of passive integrated transponder and visual implant elastomer on the small-bodied white sands pupfish (Cyprinodon tularosa)

One of the greatest limiting factors of studies designed to obtain growth, movement, and survival in small-bodied fishes is the selection of a viable tag. The tag must be relatively small with respect to body size as to impart minimal sub-lethal effects on growth and mobility, as well as be retained throughout the life of the fish or duration of the study. Thus, body size of the model species beco
Authors
Damon Peterson, Randi B. Trantham, Tulley G. Trantham, Colleen A. Caldwell

Regeneration and invasion of cottonwood riparian forest following wildfire

Populus deltoides is considered to be a weak resprouter and highly susceptible to wildfire, but few post-wildfire studies have tracked P. deltoides response and resprouting within the Great Plains of North America. Following a wildfire in southwestern Kansas, U.S.A., we surveyed burned and unburned areas of a cottonwood riparian forest along the Cimarron River that included a major understory inva
Authors
Carissa L. Wonkka, Dirac Twidwell, Christine H. Bielski, Craig R. Allen, Michael C. Stambaugh

Endemic chronic wasting disease causes mule deer population decline in Wyoming

Chronic wasting disease (CWD) is a fatal transmissible spongiform encephalopathy affecting white-tailed deer (Odocoileus virginianus), mule deer (Odocoileus hemionus), Rocky Mountain elk (Cervus elaphus nelsoni), and moose (Alces alces shirasi) in North America. In southeastern Wyoming average annual CWD prevalence in mule deer exceeds 20% and appears to contribute to regional population declines.
Authors
Melia DeVivo, David R. Edmunds, Matthew J. Kauffman, Brant A. Schumaker, Justin Binfet, Terry J. Kreeger, Bryan J. Richards, Hermann M. Schatzl, Todd Cornish

At the forefront: evidence of the applicability of using environmental DNA to quantify the abundance of fish populations in natural lentic waters with additional sampling considerations

Environmental DNA (eDNA) sampling has proven to be a valuable tool for detecting species in aquatic ecosystems. Within this rapidly evolving field, a promising application is the ability to obtain quantitative estimates of relative species abundance based on eDNA concentration rather than traditionally labor-intensive methods. We investigated the relationship between eDNA concentration and Arctic
Authors
Stephen L. Klobucar, Torrey W. Rodgers, Phaedra Budy

Quantifying long-term population growth rates of threatened bull trout: challenges, lessons learned, and opportunities

Temporal symmetry models (TSM) represent advances in the analytical application of mark–recapture data to population status assessments. For a population of char, we employed 10 years of active and passive mark–recapture data to quantify population growth rates using different data sources and analytical approaches. Estimates of adult population growth rate were 1.01 (95% confidence interval = 0.8
Authors
Phaedra Budy, Tracy Bowerman, Robert K. Al-Chokhachy, Mary Conner, Howard Schaller

Protected areas as social-ecological systems: perspectives from resilience and social-ecological systems theory

Conservation biology and applied ecology increasingly recognize that natural resource management is both an outcome and a driver of social, economic, and ecological dynamics. Protected areas offer a fundamental approach to conserving ecosystems, but they are also social-ecological systems whose ecological management and sustainability are heavily influenced by people. This editorial, and the paper
Authors
Graeme S. Cumming, Craig R. Allen