Publications
Publications from USGS science centers throughout the Southeast Region.
Filter Total Items: 10221
Attenuation of acid rock drainage by stimulating sulfur-reducing bacteria Attenuation of acid rock drainage by stimulating sulfur-reducing bacteria
Iron-sulfide minerals found in shale formations are stable under anaerobic conditions. However, in the presence of oxygen and water, acid-loving chemolithotrophic bacteria can transform the iron-sulfide minerals into a toxic solution of sulfuric acid and dissolved iron and minerals known as acid rock drainage (ARD). The objective of this study was to disrupt chemolithotrophic bacteria...
Authors
Thomas D. Byl, Ronald Oniszczak, Diarra Fall, Petra Kim Byl, Michael Bradley
Discovery of a rare pillar coral (Dendrogyra cylindrus) death assemblage off southeast Florida reveals multi-century persistence during the late Holocene Discovery of a rare pillar coral (Dendrogyra cylindrus) death assemblage off southeast Florida reveals multi-century persistence during the late Holocene
In recent years, coral populations in the western Atlantic have undergone widespread declines from climate change, anthropogenic stressors, and infectious disease outbreaks. The pillar coral, Dendrogyra cylindrus, has been one of the most affected species, prompting its listing as threatened under the United States Endangered Species Act in 2014 and critically endangered under the IUCN...
Authors
Alexander B. Modys, Lauren Toth, Richard A. Mortlock, Anton E. Olenik, William F. Precht
Isotopic niche of New Jersey terrapins suggests intraspecific resource partitioning, and little variability following a major hurricane Isotopic niche of New Jersey terrapins suggests intraspecific resource partitioning, and little variability following a major hurricane
Diamondback terrapins (Malaclemys terrapin) are sexually dimorphic generalist turtles that inhabit salt marshes and estuaries along the Atlantic and Gulf coasts of the United States. On October 29th, 2012, Hurricane Sandy made landfall in New Jersey, USA, directly impacting terrapin populations inhabiting central and southern Barnegat Bay. To examine potential food web mediated impacts...
Authors
Mathew Denton, Kristen Hart, John Wnek, Sarah A. Moss, Harold W. Avery
Stimulation of aquatic bacteria from Mammoth Cave, Kentucky, by sublethal concentrations of antibiotics Stimulation of aquatic bacteria from Mammoth Cave, Kentucky, by sublethal concentrations of antibiotics
Many microorganisms secrete secondary metabolites with antibiotic properties; however, there is debate whether the secretions evolved as a means to gain a competitive edge or as a chemical signal to coordinate community growth. The objective of this research was to investigate if select antibiotics acted as a weapon or as a chemical signal by exposing communities of aquatic cave bacteria...
Authors
Thomas D. Byl, Petra Kim Byl, Jacob P. Byl, Rickard Toomey
Magnitude and frequency of floods for rural streams in Georgia, South Carolina, and North Carolina, 2017—Summary Magnitude and frequency of floods for rural streams in Georgia, South Carolina, and North Carolina, 2017—Summary
Reliable flood-frequency estimates are important for hydraulic structure design and floodplain management in Georgia, South Carolina, and North Carolina. Annual peak streamflows (hereafter, referred to as peak flows) measured at 965 U.S. Geological Survey streamgages were used to compute flood-frequency estimates with annual exceedance probabilities (AEPs) of 50, 20, 10, 4, 2, 1, 0.5...
Authors
Toby D. Feaster, Anthony J. Gotvald, Jonathan W. Musser, J. Curtis Weaver, Katharine Kolb
Magnitude and frequency of floods for rural streams in Georgia, South Carolina, and North Carolina, 2017—Results Magnitude and frequency of floods for rural streams in Georgia, South Carolina, and North Carolina, 2017—Results
Reliable estimates of the magnitude and frequency of floods are an important part of the framework for hydraulic-structure design and flood-plain management in Georgia, South Carolina, and North Carolina. Annual peak flows measured at U.S. Geological Survey streamgages are used to compute flood‑frequency estimates at those streamgages. However, flood‑frequency estimates also are needed...
Authors
Toby D. Feaster, Anthony J. Gotvald, Jonathan W. Musser, J. Curtis Weaver, Katharine Kolb, Andrea G. Veilleux, Daniel M. Wagner
Public-supply water use in 2010 and projections of use in 2020 and 2030, Tennessee Public-supply water use in 2010 and projections of use in 2020 and 2030, Tennessee
Future water use was projected for public-water systems in Tennessee. Water-use information was compiled for Tennessee for 2010, and projections were made to 2020 and 2030. The water-use models were based on two primary datasets: baseline water-use information for 2010 for Tennessee and projected population in Tennessee.Population and water withdrawals in Tennessee are expected to...
Authors
John A. Robinson, W. Scott Gain
Factors influencing egg thiamine concentrations of Lake Ontario lake trout: 2019–2020 Factors influencing egg thiamine concentrations of Lake Ontario lake trout: 2019–2020
In the Great Lakes region, thiamine deficiency is considered a recruitment bottleneck for lake trout Salvelinus namaycush and has been correlated with the consumption of non-native alewife Alosa pseudoharengus. While alewife, the most abundant forage fish in Lake Ontario, are the predominant prey for lake trout, they also consume benthic prey such as round goby Neogobius melanostomus...
Authors
Aaron Heisey, Christopher Osborne, Brian F. Lantry, Donald E. Tillitt, Jacques Rinchard
The concept of land bridge marshes in the Mississippi River Delta and implications for coastal restoration The concept of land bridge marshes in the Mississippi River Delta and implications for coastal restoration
Louisiana has high coastal wetland loss rates due to natural processes such as subsidence and anthropogenic activities such as construction of river levees and dams, pervasive alteration of surface hydrology by local industries such as oil and gas, and navigation. With the exception of the Atchafalaya River discharge area, most of Louisiana's marsh coastline is retreating and coastal...
Authors
John W. Day, Robert R. Twilley, Angelina Freeman, Brady Couvillion, Tracy Quirk, Navid H. Jafari, Giulio Mariotti, Rachael Hunter, Charles Norman, G. Paul Kemp, John R. White, Ehab Meselhe
A novel assembly pipeline and functional annotations for targeted sequencing: A case study on the globally threatened Margaritiferidae (Bivalvia: Unionida) A novel assembly pipeline and functional annotations for targeted sequencing: A case study on the globally threatened Margaritiferidae (Bivalvia: Unionida)
The proliferation of genomic sequencing approaches has significantly impacted the field of phylogenetics. Target capture approaches provide a cost-effective, fast and easily applied strategy for phylogenetic inference of non-model organisms. However, several existing target capture processing pipelines are incapable of incorporating whole genome sequencing (WGS). Here, we develop a new...
Authors
André Gomes-dos-Santos, Elsa Froufe, John M. Pfeiffer, Nathan Johnson, Chase H. Smith, André M. Machado, L. Filipe C. Castro, Van Tu Do, Akimasa Hattori, Nicole Garrison, Nathan V. Whelan, Ivan N. Bolotov, Ilya V. Vikhrev, Alexander V. Kondakov, Mohamed Ghamizi, Vincent Prié, Arthur E. Bogan, Manuel Lopes Lima
Quantifying uncertainty in coastal salinity regime for biological application using quantile regression Quantifying uncertainty in coastal salinity regime for biological application using quantile regression
Salinity regimes in coastal ecosystems are highly dynamic and driven by complex geomorphic and hydrological processes. Estuarine biota are generally adapted to salinity fluctuation, but are vulnerable to salinity extremes. Characterizing coastal salinity regime for ecological studies therefore requires representing extremes of salinity ranges at time scales relevant to ecology (e.g...
Authors
Simeon Yurek, Micheal S Allen, Mitchell Eaton, David Chagaris, Nathan Reaver, Julien Martin, Peter C Frederick, Mark Dehaven
The potential for coral reef restoration to mitigate coastal flooding as sea levels rise The potential for coral reef restoration to mitigate coastal flooding as sea levels rise
The ability of reefs to protect coastlines from storm-driven flooding hinges on their capacity to keep pace with sea-level rise. Here, we show how and whether coral restoration could achieve the often-cited goal of reversing the impacts of coral-reef degradation to preserve this essential function. We combined coral-growth measurements and carbonate-budget assessments of reef-accretion...
Authors
Lauren Toth, Curt Storlazzi, Elizabeth M. Whitcher, Ilsa B. Kuffner, Ellen Quataert, Johan Reyns, Robert T. McCall, Anastasios Stathakopoulos, Zandy Hillis-Starr, Nathaniel H. Holloway, Kristin A. Ewen, Clayton G. Pollock, Tess Code, Richard B. Aronson