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Publications

For more than a century, USGS scientists have conducted research in California’s Bay-Delta region. Informing natural-resource management decisions on the region’s issues, this research has been published in thousands of documents, some highlighted below.

Filter Total Items: 308

Estuarine sedimentation, sediment character, and foraminiferal distribution in central San Francisco Bay, California

Central San Francisco Bay is the deepest subembayment in the San Francisco Bay estuary and hence has the largest water volume of any of the subembayments. It also has the strongest tidal currents and the coarsest sediment within the estuary. Tidal currents are strongest over the west-central part of central bay and, correspondingly, this area is dominated by sand-size sediment. Much of the area ea
Authors
John L. Chin, Donald L. Woodrow, Mary McGann, Florence L. Wong, Theresa A. Fregoso, Bruce E. Jaffe

Groundwater quality in the North San Francisco Bay groundwater basins, California

Groundwater provides more than 40 percent of California's drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State's groundwater quality and increases public access to groundwater-quality information. The basins nor
Authors
Justin T. Kulongoski, Kenneth Belitz

California's BAY-DELTA: USGS Science Supports Decision Making

U.S. Geological Survey (USGS) scientists are in the forefront of the effort to understand what causes changes in the hydrology, the ecology and the water quality of the Sacramento-San Joaquin River Delta and the San Francisco Bay estuary. Their scientific findings play a crucial role in how agencies manage the Bay-Delta on a daily basis.
Authors
James Nickles, Kimberly Taylor, Roger Fujii

Digital tabulation of geologic and hydrologic data from wells in the northern San Francisco Bay region, northern California

Downhole lithologic information and aquifer pumping test data are reported from 464 wells from a broad area of the northern part of the Coast Ranges in California. These data were originally published in paper form as numerous tables within three USGS Water-Supply Papers describing geology and groundwater conditions in Napa and Sonoma Valleys, the Santa Rosa and Petaluma Valley areas, and in the R
Authors
D. S. Sweetkind, E. M. Taylor

Organochlorine and PBDE concentrations in relation to cytochrome P450 activity in livers of Forster’s Terns (Sterna forsteri) and Caspian Terns (Hydroprogne caspia), in San Francisco Bay, California

We measured halogenated organic contaminants (HOCs) [polybrominated diphenyl ethers (PBDEs), polychlorinated biphenyls (PCBs), and dichloro-diphenyl-trichloroethane (DDT)] and P450 [e.g., ethoxyresorufin-O-dealkylase (EROD)] stress in livers from Caspian tern (Hydroprogne caspia) adults and Forster’s tern (Sterna forsteri) adults and chicks in San Francisco Bay (SFB). Penta BDEs and tetra PBDEs co
Authors
Garth Herring, Joshua T. Ackerman, Collin A. Eagles-Smith, Terrence L. Adelsbach, Mark J. Melancon, Katie R. Stebbins, David J. Hoffman

Mapping elevations of tidal wetland restoration sites in San Francisco Bay: Comparing accuracy of aerial lidar with a singlebeam echosounder

The southern edge of San Francisco Bay is surrounded by former salt evaporation ponds, where tidal flow has been restricted since the mid to late 1890s. These ponds are now the focus of a large wetland restoration project, and accurate measurement of current pond bathymetry and adjacent mud flats has been critical to restoration planning. Aerial light detection and ranging (lidar) has become a too
Authors
N.D. Athearn, John Y. Takekawa, B. Jaffe, B.J. Hattenbach, A.C. Foxgrover

Space use and habitat selection of migrant and resident American Avocets in San Francisco Bay

San Francisco Bay is a wintering area for shorebirds, including American Avocets (Recurvirostra americana). Recently, a new resident population of avocets has emerged, presumably because of the development of tidal marshes into salt-evaporation ponds. In habitat restoration now underway, as many as 90% of salt ponds will be restored to tidal marsh. However, it is unknown if wintering and resident
Authors
Scott A. Demers, John Y. Takekawa, Joshua T. Ackerman, N. Warnock, N.D. Athearn

Spatial trends in tidal flat shape and associated environmental parameters in South San Francisco Bay

Spatial trends in the shape of profiles of South San Francisco Bay (SSFB) tidal flats are examined using bathymetric and lidar data collected in 2004 and 2005. Eigenfunction analysis reveals a dominant mode of morphologic variability related to the degree of convexity or concavity in the cross-shore profileindicative of (i) depositional, tidally dominant or (ii) erosional, wave impacted conditions
Authors
J.A. Bearman, Carl T. Friedrichs, B. E. Jaffe, A.C. Foxgrover

Detrital zircon evidence for progressive underthrusting in Franciscan metagraywackes, west-central California

We present new U/Pb ages for detrital zircons separated from six quartzose metagraywackes collected from different Franciscan Complex imbricate nappes around San Francisco Bay. All six rocks contain a broad spread of Late Jurassic-Cretaceous grains originating from the Klamath-Sierra Nevada volcanic-plutonic arc. Units young structurally downward, consistent with models of progressive underplating
Authors
C.A. Snow, J. Wakabayashi, W. G. Ernst, J. L. Wooden

The annual cycles of phytoplankton biomass

Terrestrial plants are powerful climate sentinels because their annual cycles of growth, reproduction and senescence are finely tuned to the annual climate cycle having a period of one year. Consistency in the seasonal phasing of terrestrial plant activity provides a relatively low-noise background from which phenological shifts can be detected and attributed to climate change. Here, we ask whethe
Authors
Monika Winder, James E. Cloern

Mercury-contaminated hydraulic mining debris in San Francisco Bay

The hydraulic gold-mining process used during the California Gold Rush and in many developing countries today contributes enormous amounts of sediment to rivers and streams. Commonly, accompanying this sediment are contaminants such as elemental mercury and cyanide used in the gold extraction process. We show that some of the mercurycontaminated sediment created by hydraulic gold mining in the Sie
Authors
Robin M. Bouse, Christopher C. Fuller, Samuel N. Luoma, Michelle I. Hornberger, Bruce E. Jaffe, Richard E. Smith