Melanie Culver, PhD (Former Employee)
Science and Products
Filter Total Items: 44
Can captive populations function as sources of genetic variation for reintroductions into the wild? A case study of the Arabian oryx from the Phoenix Zoo and the Shaumari Wildlife Reserve, Jordan
The Arabian oryx (Oryx leucoryx) historically ranged across the Arabian Peninsula and neighboring countries until its extirpation in 1972. In 1963–1964 a captive breeding program for this species was started at the Phoenix Zoo (PHX); it ultimately consisted of 11 animals that became known as the ‘World Herd’. In 1978–1979 a wild population was established at the Shaumari Wildlife Reserve...
Authors
Alexander Ochoa, Stuart A. Wells, Gary West, Ma’en Al-Smadi, Sergio A. Redondo, Sydnee R. Sexton, Melanie Culver
Molecular detection of bacteria in the families Rickettsiaceae and Anaplasmataceae in northern crested caracaras (Caracara cheriway)
Bacterial pathogens of the families Anaplasmataceae and Rickettsiaceae are often spread to humans or other animals from bites from infected arthropod hosts. Recently, an increasing number of studies have implicated migratory birds in the circulation of these pathogens through the spread of arthropod vectors. However, few studies have examined the potential for resident bird populations...
Authors
John A. Erwin, Robert R. Fitak, James F. Dwyer, Joan L. Morrison, Melanie Culver
Assessing models of speciation under different biogeographic scenarios; An empirical study using multi-locus and RNA-seq analyses
Evolutionary biology often seeks to decipher the drivers of speciation, and much debate persists over the relative importance of isolation and gene flow in the formation of new species. Genetic studies of closely related species can assess if gene flow was present during speciation, because signatures of past introgression often persist in the genome. We test hypotheses on which...
Authors
Taylor Edwards, Marc Tollis, PingHsun Hsieh, Ryan N. Gutenkunst, Zhen Liu, Kenro Kusumi, Melanie Culver, Robert W. Murphy
Development and characterization of polymorphic microsatellitemarkers for the crested caracara, Caracara cheriway
We isolated novel microsatellites from the crested caracara (Caracara cheriway) with a shotgun pyrosequencing approach. We tested 80 loci for polymorphism among 20 individuals from the threatened Florida population. Fourteen loci were polymorphic. The mean number of alleles was 2.21 (range 2–3) and the mean observed heterozygosity was 0.41 (range 0.15–0.65). None of the 14 polymorphic...
Authors
Erin E. Vaughn, James F. Dwyer, Joan L. Morrison, Melanie Culver
Shaping species with ephemeral boundaries: The distribution and genetic structure of desert tortoise (Gopherus morafkai) in the Sonoran Desert region
Aim We examine the role biogeographical features played in the evolution of Morafka's desert tortoise (Gopherus morafkai) and test the hypothesis that G. morafkai maintains genetically distinct lineages associated with different Sonoran Desert biomes. Increased knowledge of the past and present distribution of the Sonoran Desert region's biota provides insight into the forces that drive...
Authors
Taylor Edwards, Mercy Vaughn, Philip C. Rosen, Ma. Cristina Melendez Torres, Alice E. Karl, Melanie Culver, Robert W. Murphy
Testing taxon tenacity of tortoises: evidence for a geographical selection gradient at a secondary contact zone
We examined a secondary contact zone between two species of desert tortoise, Gopherus agassizii and G. morafkai. The taxa were isolated from a common ancestor during the formation of the Colorado River (4-8 mya) and are a classic example of allopatric speciation. However, an anomalous population of G. agassizii comes into secondary contact with G. morafkai east of the Colorado River in...
Authors
Taylor Edwards, Kristin H. Berry, Richard D. Inman, Todd Esque, Kenneth E. Nussear, Cristina A. Jones, Melanie Culver
Characterization of microsatellite loci from two-spotted octopus Octopus bimaculatus Verrill 1883 from pyrosequencing reads
We characterized 22 novel microsatellite loci in the two-spotted octopus Octopus bimaculatus using 454 pyrosequencing reads. All loci were polymorphic and will be used in studies of marine connectivity aimed at increasing sustainability of the resource. The mean number alleles per locus was 13.09 (range 7–19) and observed heterozygosities ranged from 0.50 to 1.00. Four loci pairs were...
Authors
J. F. Domínguez-Contreras, Adrian Munguia-Vega, B. P. Ceballos-Vázquez, M. Arellano-Martínez, Melanie Culver
Genetic diversity and demography of two endangered captive pronghorn subspecies from the Sonoran Desert
Species that have experienced population reduction provide valuable case studies for understanding genetic responses to demographic change. Pronghorn (Antilocapra americana) were once widespread across the North American plains but were subject to drastic population reductions due to overexploitation and habitat fragmentation during the late 19th and early 20th centuries. A. a...
Authors
Anastasia Klimova, Adrian Munguia-Vega, Joseph I. Hoffman, Melanie Culver
Localized extinction of an arboreal desert lizard caused by habitat fragmentation
We adopted a species’ perspective for predicting extinction risk in a small, endemic, and strictly scansorial lizard (Urosaurus nigricaudus), in an old (∼60 year) and highly fragmented (8% habitat remaining) agricultural landscape from the Sonoran Desert, Mexico. We genotyped 10 microsatellite loci in 280 individuals from 11 populations in fragmented and continuous habitat. Individual...
Authors
Adrian Munguia-Vega, Ricardo Rodriguez-Estrella, William W. Shaw, Melanie Culver
New microsatellite loci isolated via next-generation sequencing for two endangered pronghorn from the Sonoran Desert
We isolated 16 novel microsatellite loci in two subspecies of endangered desert pronghorns (Antilocapra americana sonoriensis and Antilocapra americana peninsularis) using a shotgun pyrosequencing approach. All and 87.5 % of the loci were polymorphic within each subspecies, respectively. The mean number of alleles per locus was 4.86 (range 2–8) and 2.5 alleles per locus (range 1–4...
Authors
Adrian Munguia-Vega, Anastasia Klimova, Melanie Culver
Anatomical and genetic variation of western Oxyloma (Pulmonata: Succineidae) concerning the endangered Kanab ambersnail (Oxyloma haydeni kanabense) in Arizona and Utah
The land snail genus Oxyloma (Pulmonata: Succineidae) includes the Federally endangered Kanab ambersnail (Oxyloma haydeni kanabense Pilsbry), which is known at the time of this study from only two locations in the United States: Three Lakes, Utah, and Vaseys Paradise, Arizona, on the Colorado River in Grand Canyon National Park. Since 1994, the Kanab ambersnail has received much...
Authors
Melanie Culver, Hans-Werner Herrmann, Mark P. Miller, Barry Roth, Jeff Sorenson
Severe reduction in genetic variation in a montane isolate: The endangered Mount Graham red squirrel (Tamiasciurus hudsonicus grahamensis)
The Mount Graham red squirrel (Tamiasciurus hudsonicus grahamensis; MGRS) is endemic to the Pinaleño Mountains of Arizona at the southernmost extent of the species’ range. The MGRS was listed as federally endangered in 1987, and is currently at high risk of extinction due to declining population size and increasing threats. Here we present a genetic assessment of the MGRS using eight...
Authors
Robert R. Fitak, John L. Koprowski, Melanie Culver
Science and Products
Filter Total Items: 44
Can captive populations function as sources of genetic variation for reintroductions into the wild? A case study of the Arabian oryx from the Phoenix Zoo and the Shaumari Wildlife Reserve, Jordan
The Arabian oryx (Oryx leucoryx) historically ranged across the Arabian Peninsula and neighboring countries until its extirpation in 1972. In 1963–1964 a captive breeding program for this species was started at the Phoenix Zoo (PHX); it ultimately consisted of 11 animals that became known as the ‘World Herd’. In 1978–1979 a wild population was established at the Shaumari Wildlife Reserve...
Authors
Alexander Ochoa, Stuart A. Wells, Gary West, Ma’en Al-Smadi, Sergio A. Redondo, Sydnee R. Sexton, Melanie Culver
Molecular detection of bacteria in the families Rickettsiaceae and Anaplasmataceae in northern crested caracaras (Caracara cheriway)
Bacterial pathogens of the families Anaplasmataceae and Rickettsiaceae are often spread to humans or other animals from bites from infected arthropod hosts. Recently, an increasing number of studies have implicated migratory birds in the circulation of these pathogens through the spread of arthropod vectors. However, few studies have examined the potential for resident bird populations...
Authors
John A. Erwin, Robert R. Fitak, James F. Dwyer, Joan L. Morrison, Melanie Culver
Assessing models of speciation under different biogeographic scenarios; An empirical study using multi-locus and RNA-seq analyses
Evolutionary biology often seeks to decipher the drivers of speciation, and much debate persists over the relative importance of isolation and gene flow in the formation of new species. Genetic studies of closely related species can assess if gene flow was present during speciation, because signatures of past introgression often persist in the genome. We test hypotheses on which...
Authors
Taylor Edwards, Marc Tollis, PingHsun Hsieh, Ryan N. Gutenkunst, Zhen Liu, Kenro Kusumi, Melanie Culver, Robert W. Murphy
Development and characterization of polymorphic microsatellitemarkers for the crested caracara, Caracara cheriway
We isolated novel microsatellites from the crested caracara (Caracara cheriway) with a shotgun pyrosequencing approach. We tested 80 loci for polymorphism among 20 individuals from the threatened Florida population. Fourteen loci were polymorphic. The mean number of alleles was 2.21 (range 2–3) and the mean observed heterozygosity was 0.41 (range 0.15–0.65). None of the 14 polymorphic...
Authors
Erin E. Vaughn, James F. Dwyer, Joan L. Morrison, Melanie Culver
Shaping species with ephemeral boundaries: The distribution and genetic structure of desert tortoise (Gopherus morafkai) in the Sonoran Desert region
Aim We examine the role biogeographical features played in the evolution of Morafka's desert tortoise (Gopherus morafkai) and test the hypothesis that G. morafkai maintains genetically distinct lineages associated with different Sonoran Desert biomes. Increased knowledge of the past and present distribution of the Sonoran Desert region's biota provides insight into the forces that drive...
Authors
Taylor Edwards, Mercy Vaughn, Philip C. Rosen, Ma. Cristina Melendez Torres, Alice E. Karl, Melanie Culver, Robert W. Murphy
Testing taxon tenacity of tortoises: evidence for a geographical selection gradient at a secondary contact zone
We examined a secondary contact zone between two species of desert tortoise, Gopherus agassizii and G. morafkai. The taxa were isolated from a common ancestor during the formation of the Colorado River (4-8 mya) and are a classic example of allopatric speciation. However, an anomalous population of G. agassizii comes into secondary contact with G. morafkai east of the Colorado River in...
Authors
Taylor Edwards, Kristin H. Berry, Richard D. Inman, Todd Esque, Kenneth E. Nussear, Cristina A. Jones, Melanie Culver
Characterization of microsatellite loci from two-spotted octopus Octopus bimaculatus Verrill 1883 from pyrosequencing reads
We characterized 22 novel microsatellite loci in the two-spotted octopus Octopus bimaculatus using 454 pyrosequencing reads. All loci were polymorphic and will be used in studies of marine connectivity aimed at increasing sustainability of the resource. The mean number alleles per locus was 13.09 (range 7–19) and observed heterozygosities ranged from 0.50 to 1.00. Four loci pairs were...
Authors
J. F. Domínguez-Contreras, Adrian Munguia-Vega, B. P. Ceballos-Vázquez, M. Arellano-Martínez, Melanie Culver
Genetic diversity and demography of two endangered captive pronghorn subspecies from the Sonoran Desert
Species that have experienced population reduction provide valuable case studies for understanding genetic responses to demographic change. Pronghorn (Antilocapra americana) were once widespread across the North American plains but were subject to drastic population reductions due to overexploitation and habitat fragmentation during the late 19th and early 20th centuries. A. a...
Authors
Anastasia Klimova, Adrian Munguia-Vega, Joseph I. Hoffman, Melanie Culver
Localized extinction of an arboreal desert lizard caused by habitat fragmentation
We adopted a species’ perspective for predicting extinction risk in a small, endemic, and strictly scansorial lizard (Urosaurus nigricaudus), in an old (∼60 year) and highly fragmented (8% habitat remaining) agricultural landscape from the Sonoran Desert, Mexico. We genotyped 10 microsatellite loci in 280 individuals from 11 populations in fragmented and continuous habitat. Individual...
Authors
Adrian Munguia-Vega, Ricardo Rodriguez-Estrella, William W. Shaw, Melanie Culver
New microsatellite loci isolated via next-generation sequencing for two endangered pronghorn from the Sonoran Desert
We isolated 16 novel microsatellite loci in two subspecies of endangered desert pronghorns (Antilocapra americana sonoriensis and Antilocapra americana peninsularis) using a shotgun pyrosequencing approach. All and 87.5 % of the loci were polymorphic within each subspecies, respectively. The mean number of alleles per locus was 4.86 (range 2–8) and 2.5 alleles per locus (range 1–4...
Authors
Adrian Munguia-Vega, Anastasia Klimova, Melanie Culver
Anatomical and genetic variation of western Oxyloma (Pulmonata: Succineidae) concerning the endangered Kanab ambersnail (Oxyloma haydeni kanabense) in Arizona and Utah
The land snail genus Oxyloma (Pulmonata: Succineidae) includes the Federally endangered Kanab ambersnail (Oxyloma haydeni kanabense Pilsbry), which is known at the time of this study from only two locations in the United States: Three Lakes, Utah, and Vaseys Paradise, Arizona, on the Colorado River in Grand Canyon National Park. Since 1994, the Kanab ambersnail has received much...
Authors
Melanie Culver, Hans-Werner Herrmann, Mark P. Miller, Barry Roth, Jeff Sorenson
Severe reduction in genetic variation in a montane isolate: The endangered Mount Graham red squirrel (Tamiasciurus hudsonicus grahamensis)
The Mount Graham red squirrel (Tamiasciurus hudsonicus grahamensis; MGRS) is endemic to the Pinaleño Mountains of Arizona at the southernmost extent of the species’ range. The MGRS was listed as federally endangered in 1987, and is currently at high risk of extinction due to declining population size and increasing threats. Here we present a genetic assessment of the MGRS using eight...
Authors
Robert R. Fitak, John L. Koprowski, Melanie Culver