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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41758

A 1.2 billion pixel human-labeled dataset for data-driven classification of coastal environments

The world’s coastlines are spatially highly variable, coupled-human-natural systems that comprise a nested hierarchy of component landforms, ecosystems, and human interventions, each interacting over a range of space and time scales. Understanding and predicting coastline dynamics necessitates frequent observation from imaging sensors on remote sensing platforms. Machine Learning models that carry
Authors
Daniel Buscombe, Phillipe Alan Wernette, Sharon Fitzpatrick, Jaycee Favela, Evan B. Goldstein, Nicholas Enwright

Persistence and quality of vegetation cover in expired Conservation Reserve Program fields

For nearly 40 years, the Conservation Reserve Program (CRP) has implemented practices to reduce soil erosion, improve water quality, and provide habitat for wildlife and pollinators on highly erodible cropland in the United States. However, an approximately 40,470 ha (10 million acres) decline in enrolled CRP land over the last decade has greatly reduced the program's environmental benefits. We so
Authors
Mark W. Vandever, Kenneth Elgersma, Sarah K. Carter, Ai Wen, Justin L. Welty, Robert Arkle, Timothy J. Assal, David Pilliod, David M. Mushet, Rich Iovanna

Adult spawners: A critical period for subarctic Chinook salmon in a changing climate

Concurrent, distribution-wide abundance declines of some Pacific salmon species, including Chinook salmon (Oncorhynchus tshawytscha), highlights the need to understand how vulnerability at different life stages to climate stressors affects population dynamics and fisheries sustainability. Yukon River Chinook salmon stocks are among the largest subarctic populations, near the northernmost extent of
Authors
Kathrine G. Howard, Vanessa R. von Biela

Taxonomic reassessment of the Little pocket mouse, Perognathus longimembris (Rodentia, Heteromyidae) of southern California and northern Baja California

The Little pocket mouse (Perognathus longimembris) encompasses 15 to 16 currently recognized subspecies, six of which are restricted to southern California and adjacent northern Baja California.  Using cranial geomorphometric shape parameters and dorsal color variables we delineate six regional groups of populations from this area that we recognize as valid, but these differ in name combination an
Authors
James L. Patton, Robert N. Fisher

Local weather and endogenous factors affect the initiation of migration in short- and medium-distance songbird migrants

Migratory birds employ a variety of mechanisms to ensure appropriate timing of migration based on integration of endogenous and exogenous information. The cues to fatten and depart from the non-breeding area are often linked to exogenous cues such as temperature or precipitation and the endogenous program. Shorter distance migrants should rely heavily on environmental information when initiating m
Authors
Theodore J. Zenzal, Darren Johnson, Frank R. Moore, Zoltán Németh

Redd superimposition mediates the accuracy, precision, and significance of redd counts for cutthroat trout

Redd counts are commonly applied to estimate spawning population size for salmonids and allow for broad spatial and temporal coverage in monitoring efforts. However, the utility of redd counts may be compromised by observation error, particularly with respect to superimposition, where later arriving spawners construct redds overlapping existing redds. Here, we provide a mechanistic evaluation of t
Authors
Jeffrey R. Baldock, Robert Al-Chokhachy, Timothy E. Walsworth, Annika W. Walters

Invaders at the doorstep: Using species distribution modeling to enhance invasive plant watch lists

Watch lists of invasive species that threaten a particular land management unit are useful tools because they can draw attention to invasive species at the very early stages of invasion when early detection and rapid response efforts are often most successful. However, watch lists typically rely on the subjective selection of invasive species by experts or on the use of spotty occurrence records.
Authors
Catherine S. Jarnevich, Peder Engelstad, Jillian LaRoe, Brandon Hays, Terri Hogan, Jeremy Jirak, Ian Pearse, Janet S. Prevéy, Jennifer Sieraki, Annie Simpson, Jess Wenick, Nicholas Young, Helen Sofaer

Climate change hotspots and implications for the global subsea telecommunications network

A global network of subsea telecommunications cables underpins our daily lives, enabling >95% of global digital data transfer, $trillions/day in financial trading, and providing critical communications links, particularly to remote, low-income countries. Despite their importance, subsea cables and their landing stations are vulnerable to damage by natural hazards, including storm surges, waves, cy
Authors
M.A. Clare, I.A. Yeo, L. Bricheno, Y Askenov, J. Browning, I.D. Haigh, T. Wahl, J. A. Hunter, C. Sams, Jason Chaytor, B.J. Bett, L. Carter

Plant community predictions support the potential for big sagebrush range expansion adjacent to the leading edge

Big sagebrush ecosystems are widespread across drylands of western North America and provide numerous services, but the abundance of these ecosystems has declined substantially and the future of these ecosystems is uncertain. As a result, characterizing potential areas for expansion of these ecosystems is important. Species distribution models of the big sagebrush suggest areas of increasing clima
Authors
T. Martyn, K. Palmquist, John B. Bradford, Daniel Rodolphe Schlaepfer, W.K. Lauenroth

Addressing a potential weakness in indices of predation, herbivory, and parasitism

Quantification of predation, herbivory, and parasitism is critical to understanding the dynamics and trophic interactions of populations in an ecosystem. Such quantification can be challenging if the availability or consumption of the taxa are difficult to assess. Sometimes the consumption of a single prey, forage, or host is used as an overall index of the predation, herbivory, or parasitism for
Authors
Jean V. Adams

Drivers of survival of translocated tortoises

Translocation of animals, especially for threatened and endangered species, is a currently popular but very challenging activity. We translocated 158 adult Agassiz's desert tortoises (Gopherus agassizii), a threatened species, from the National Training Center, Fort Irwin, in the central Mojave Desert in California, USA, to 4 plots as part of a long-distance, hard-release, mitigation-driven transl
Authors
Jeremy S Mack, Kristin H. Berry

A field test of R package GPSeqClus: For establishing animal location clusters

The ability to track animals with Global Positioning System (GPS) collars opened an enormous potential for studying animal movements and behaviour in their natural environment. One such endeavour is to identify clusters of GPS locations as a way to estimate predator kill rate. Clapp et al. (2021) developed an R package (GPSeqClus) to assess a location dataset based on user-defined parameters to id
Authors
H. Dean Cluff, L. David Mech