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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42220

Pathogenicity of West Nile virus and response to vaccination in sandhill cranes (Grus canadensis) using a killed vaccine

West Nile virus was introduced into the United States in the vicinity of New York, New York, USA in 1999. The virus has since killed large numbers of birds nationwide, especially, but not limited to, crows (Corvus brachyrhinchos). One sandhill crane (Grus canadensis) at the Bridgeport Zoo (Bridgeport, Connecticut, USA) reportedly died from West Nile virus, so sandhill cranes and...
Authors
Glenn H. Olsen, Kimberli J.G. Miller, Douglas E. Docherty, Valerie I. Shearn-Bochsler, Louis Sileo

Factors associated with arrival densities of grasshopper sparrow (Ammodramus savannarum) and baird's sparrow (A. bairdii) in the upper great plains

Although critical to habitat and population management, the proximate cues that birds use to establish territories are largely unknown. Understanding these cues is important for birds, such as many grassland birds, that exhibit high annual variability in population density and make new habitat-selection decisions annually. Identifying the actual cues used is difficult in the field, but...
Authors
Marissa Ahlering, Douglas H. Johnson, John Faaborg

An emerging crisis across northern prairie refuges: Prevalence of invasive plants and a plan for adaptive management

In the northern Great Plains, native prairies managed by the U.S. Fish and Wildlife Service (Service) can be pivotal in conservation of North America's biological diversity. From 2002 to 2006, we surveyed 7,338 belt transects to assess the general composition of mixed-grass and tallgrass prairie vegetation across five "complexes" (i.e., administrative groupings) of national wildlife...
Authors
T.A. Grant, Bridgette Flanders-Wanner, T.L. Shaffer, R.K. Murphy, G.A. Knutsen

Factors influencing coastal cutthroat trout (Oncorhynchus clarkii clarkii) seasonal survival rates: A spatially continuous approach within stream networks

Mark-recapture methods were used to examine watershed-scale survival of coastal cutthroat trout (Oncorhynchus clarkii clarkii) from two headwater stream networks. A total of 1725 individuals (???100 mm, fork length) were individually marked and monitored seasonally over a 3-year period. Differences in survival were compared among spatial (stream segment, subwatershed, and watershed) and...
Authors
A.M. Berger, Robert E. Gresswell

Historical and modern disturbance regimes, stand structures, and landscape dynamics in piñon-juniper vegetation of the western United States

Piñon–juniper is a major vegetation type in western North America. Effective management of these ecosystems has been hindered by inadequate understanding of 1) the variability in ecosystem structure and ecological processes that exists among the diverse combinations of piñons, junipers, and associated shrubs, herbs, and soil organisms; 2) the prehistoric and historic disturbance regimes...
Authors
William H. Romme, Craig Allen, John L. Bailey, William L. Baker, Brandon T. Bestelmeyer, Peter M. Brown, Karen S. Eisenhart, M. Lisa Floyd, David W. Huffman, Brian F. Jacobs, Richard F. Miller, Esteban H. Muldavin, Thomas W. Swetnam, Robin J. Tausch, Peter J. Weisberg

Freshwater ecosystems and resilience of Pacific salmon: Habitat Management based on natural variability

In spite of numerous habitat restoration programs in fresh waters with an aggregate annual funding of millions of dollars, many populations of Pacific salmon remain significantly imperiled. Habitat restoration strategies that address limited environmental attributes and partial salmon life-history requirements or approaches that attempt to force aquatic habitat to conform to idealized...
Authors
P.A. Bisson, Jason B. Dunham, G.H. Reeves

Adaptations in a hierarchical food web of southeastern Lake Michigan

Two issues in ecological network theory are: (1) how to construct an ecological network model and (2) how do entire networks (as opposed to individual species) adapt to changing conditions? We present a novel method for constructing an ecological network model for the food web of southeastern Lake Michigan (USA) and we identify changes in key system properties that are large relative to...
Authors
Ann E. Krause, Ken A. Frank, Michael T. Jones, Thomas F. Nalepa, Richard P. Barbiero, Charles P. Madenjian, Megan Agy, Marlene S. Evans, William W. Taylor, Doran M. Mason, Nancy J. Léonard

Application of iron and zinc isotopes to track the sources and mechanisms of metal loading in a mountain watershed

Here the hydrogeochemical constraints of a tracer dilution study are combined with Fe and Zn isotopic measurements to pinpoint metal loading sources and attenuation mechanisms in an alpine watershed impacted by acid mine drainage. In the tested mountain catchment, δ56Fe and δ66Zn isotopic signatures of filtered stream water samples varied by ∼3.5‰ and 0.4‰, respectively. The inherent...
Authors
D.M. Borrok, Richard B. Wanty, Ridley W. Ian, P. J. Lamothe, B. A. Kimball, Philip L. Verplanck, Robert L. Runkel

Spatial and temporal variation in distribution of larval lake whitefish in eastern Lake Ontario: signs of recovery?

The lake whitefish (Coregonus clupeaformis) is one of the native Lake Ontario fishes that declined severely over the past century. Recent evidence of larval lake whitefish production in a historic spawning area (Chaumont Bay) might signal a recovery of this species in New York waters. We surveyed coastal and open water areas to evaluate densities and estimate total abundance of larval...
Authors
J.E. McKenna, J. Micheal Johnson

Widespread occurrence of intersex in black basses (Micropterus spp.) from U.S. rivers, 1995-2004

Intersex occurrence in freshwater fishes was evaluated for nine river basins in the United States. Testicular oocytes (predominantly male testes containing female germ cells) were the most pervasive form of intersex observed, even though similar numbers of male (n = 1477) and female (n = 1633) fish were examined. Intersex was found in 3% of the fish collected. The intersex condition was...
Authors
Jo Ellen Hinck, Vicki S. Blazer, Christopher J. Schmitt, Diana M. Papoulias, Donald E. Tillitt

Effects of introduced fish on macroinvertebrate communities in historically fishless headwater and kettle lakes

Widespread fish introductions have led to a worldwide decline in the number of fishless lakes and their associated communities. Studies assessing effects of fish stocking on native communities in historically fishless lakes have been limited to high-elevation headwater lakes stocked with non-native trout. Little is known about the effect of fish stocking in historically fishless and...
Authors
Emily G. Schilling, Cyndy Loftin, Alexander D. Huryn

Mercury demethylation in waterbird livers: Dose-response thresholds and differences among species

We assessed methylmercury (MeHg) demethylation in the livers of adults and chicks of four waterbird species that commonly breed in San Francisco Bay: American avocets, black-necked stilts, Caspian terns, and Forster's terns. In adults (all species combined), we found strong evidence for a threshold, model where MeHg demethylation occurred above a hepatic total mercury concentration...
Authors
Collin Eagles-Smith, Josh T. Ackerman, Y.E.E. Julie, T.L. Adelsbach
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