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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42181

Perchlorate isotope forensics

Perchlorate has been detected recently in a variety of soils, waters, plants, and food products at levels that may be detrimental to human health. These discoveries have generated considerable interest in perchlorate source identification. In this study, comprehensive stable isotope analyses (37Cl/35Cl and 18O/17O/16O) of perchlorate from known synthetic and natural sources reveal...
Authors
J.K. Böhlke, N.C. Sturchio, B. Gu, J. Horita, G.M. Brown, W.A. Jackson, J. Batista, P.B. Hatzinger

Effect of ferric oxyhydroxide grain coatings on the transport of bacteriophage PRD1 and Cryptosporidium parvum oocysts in saturated porous media

To test the effect of geochemical heterogeneity on microorganism transport in saturated porous media, we measured the removal of two microorganisms, the bacteriophage PRD1 and oocysts of the protozoan parasite Cryptosporidium parvum, in flow-through columns of quartz sand coated by different amounts of a ferric oxyhydroxide. The experiments were conducted over ranges of ferric...
Authors
R.A. Abudalo, Y.G. Bogatsu, J. N. Ryan, R.W. Harvey, D.W. Metge, M. Elimelech

Dating floodplain sediments using tree-ring response to burial

Floodplain sediments can be dated precisely based on the change in anatomy of tree rings upon burial. When a stem of tamarisk (Tamarix ramosissima) or sandbar willow (Salix exigua) is buried, subsequent annual rings in the buried section resemble the rings of roots: rings become narrower, vessels within the rings become larger, and transitions between rings become less distinct. We...
Authors
J. M. Friedman, K.R. Vincent, P.B. Shafroth

Dissolved saxitoxin causes transient inhibition of sensorimotor function in larval Pacific herring (Clupea harengus pallasi) Kathi A. Lefebvre , N

Herring (Clupea harengus pallasi) spawning sites in Puget Sound, Washington overlap spatially and temporally with blooms of Alexandrium catenella, a toxic dinoflagellate species responsible for paralytic shellfish poisoning. Consequently, newly hatched herring larvae may be regularly exposed to the suite of dissolved paralytic shellfish toxins that are released into the water column from...
Authors
Kathi A. Lefebvre, Nancy E. Elder, Paul K. Hershberger, Vera L. Trainer, Carla M. Stehr, Nathaniel L. Scholz

Ichthyophonus in Puget Sound rockfish from the San Juan Islands archipelago and Puget Sound, Washington, USA

In vitro explant cultures identified Ichthyophonus in 10.9% of 302 Puget Sound rockfish Sebastes emphaeus sampled from five sites in the San Juan Islands archipelago and Puget Sound, Washington, in 2003. None of the infected fish exhibited visible lesions and only a single fish was histologically positive. Significantly more females were infected (12.4%) than males (6.8%), and while...
Authors
D. Halos, S.A. Hart, P. Hershberger, R. Kocan

Inter-species variation in yolk steroid levels and a cowbird-host comparison

We examined variability in yolk hormone levels among songbird species and the role of yolk steroids as a mechanism for enhanced exploitation of hosts by the parasitic Brown-headed Cowbird Molothrus ater. Within-clutch variation in yolk steroids has been found in several avian species in single species studies, but few comparisons have been made among species. We found a large range of...
Authors
D. Caldwell Hahn, Jeffrey S. Hatfield, Mahmoud A. Abdelnabi, Julie M. Wu, Lawrence D. Igl, Mary A. Ottinger

Aqueous stability of gadolinium in surface waters receiving sewage treatment plant effluent Boulder Creek, Colorado

In many surface waters, sewage treatment plant (STP) effluent is a substantial source of both regulated and unregulated contaminants, including a suite of complex organic compounds derived from household chemicals, pharmaceutical, and industrial and medical byproducts. In addition, STP effluents in some urban areas have also been shown to have a positive gadolinium (Gd) anomaly in the...
Authors
P. L. Verplanck, Howard E. Taylor, D. Kirk Nordstrom, L. B. Barber

Watershed management and organizational dynamics: nationwide findings and regional variation

Recent attention has focused on resource management initiatives at the watershed scale with emphasis on collaborative, locally driven, and decentralized institutional arrangements. Existing literature on limited selections of well-established watershed-based organizations has provided valuable insights. The current research extends this focus by including a broad survey of watershed...
Authors
B. T. Clark, N. Burkardt, M.D. King

Duelling timescales of host mixing and disease spread determine invasion of disease in structured populations

The epidemic potential of a disease is traditionally assessed using the basic reproductive number, R0. However, in populations with social or spatial structure a chronic disease is more likely to invade than an acute disease with the same R0, because it persists longer within each group and allows for more host movement between groups. Acute diseases ‘perceive’ a more structured host...
Authors
P.C. Cross, James O. Lloyd-Smith, P.L.F. Johnson, W.M. Getz

Prey vulnerability to peacock cichlids and largemouth bass based on predator gape and prey body depth

The interaction of prey fish body depth and predator gape size may produce prey assemblages dominated by invulnerable prey and excessive prey-to-predator biomass ratios. Peacock cichlids (Cichla ocellaris) were stocked into southeast Florida canals to consume excess prey fish biomass, particularly spotted tilapia (Tilapia mariae). The ecomorphologically similar largemouth bass...
Authors
Jeffrey E. Hill, Leo G. Nico, Charles E. Cichra, Carter R. Gilbert

Status of amphibians on the Continental Divide:Surveys on a transect from Montana to Colorado, USA

The Rocky Mountain Region of the United States Geological Survey's Amphibian Research and Monitoring Initiative is conducting monitoring of the status of amphibians on a transect that extends along the Continental Divide from Canada to Colorado and comprises four National Parks. Monitoring uses visual encounter surveys to determine site occupancy, with multiple visits to a subset of...
Authors
P.S. Corn, B. R. Hossack, E. Muths, D.A. Patla, C.R. Peterson, Alisa L. Gallant

Changing patterns in coastal cutthroat trout (Oncorhynchus clarki clarki) diet and prey in a gradient of deciduous canopies

We examined the influence of riparian vegetation patterns on coastal cutthroat trout Oncorhynchus clarki clarki diet and prey from the summer of 2001 through the spring of 2002. Benthic and drifting invertebrates, allochthonous prey, and fish diet were collected from deciduous, conifer, and mixed sections of three Oregon coastal watersheds. The nine sites were best characterized as a...
Authors
N. Romero, R. E. Gresswell, J.L. Li
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