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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 171654

Wildfires influence mercury transport, methylation, and bioaccumulation in headwater streams of the Pacific Northwest

The increasing frequency and severity of wildfires are among the most visible impacts of climate change. However, the effects of wildfires on mercury (Hg) transformations and bioaccumulation in stream ecosystems are poorly understood. We sampled soils, water, sediment, in-stream leaf litter, periphyton, and aquatic invertebrates in 36 burned (one-year post fire) and 21 reference headwater streams
Authors
Austin K. Baldwin, James Willacker, Branden L. Johnson, Sarah E. Janssen, Collin A. Eagles-Smith

Freshwater biogeochemical hotspots: High primary production and ecosystem respiration in shallow waterbodies

Ponds, wetlands, and shallow lakes (collectively “shallow waterbodies”) are among the most biogeochemically active freshwater ecosystems. Measurements of gross primary production (GPP), respiration (R), and net ecosystem production (NEP) are rare in shallow waterbodies compared to larger and deeper lakes, which can bias our understanding of lentic ecosystem processes. In this study, we calculated
Authors
Joseph Rabaey, Meredith Holgerson, David Richardson, Mikkel R. Andersen, Sheel Bansal, Lauren E Bortolotti, James Cotner, Daniel Hornbach, Kenneth T. Martinsen, Eric Moody, Olivia F. Schloegel

Modeling rare plant habitat together with public land managers using an iterative, coproduced process to inform decision-making on multiple-use public lands

Public lands across the United States are managed for multiple uses, resources, and values ranging from energy development to rare plant conservation. Intensified energy development and other land use changes across the Southwestern United States have increased the need for proactive management to mitigate impacts to rare plants. Habitat suitability models can inform decision-making and lead to mo
Authors
Catherine S. Jarnevich, Sarah K. Carter, Zoe M. Davidson, Nicole D. MacPhee, Patrick J. Alexander, Brandon Hayes, Pairsa N. Belmaric, Benjamin R Harms

Incorporating projected climate conditions to map future riparian refugia

Identifying areas expected to remain buffered from climate change and maintain biodiversity and ecological function (i.e., climate refugia) is important for climate adaptation planning. As structurally diverse transitional zones between terrestrial and aquatic environments, riparian areas are often biological hotspots and provide critical corridors for species movement, particularly in arid and se
Authors
Kimberly E Szcodronski, Alisa A. Wade, Sarah Elizabeth Burton, Blake R. Hossack

Evidence of long-range transport of selenium downstream of coal mining operations in the Elk River Valley, Canada

Expanding coal-mining operations in the Elk River Valley (British Columbia, Canada) have increased total selenium (Se) concentrations in the transboundary Lake Koocanusa (Canada and United States), but the spatial extent of Se transport from the Elk River Mines is unknown. We evaluated multiple lines of evidence of long-range transport of Se at five sites downstream of the mines relative to a site
Authors
Madison Jo Foster, Meryl Biesiot Storb, Johanna Blake, Travis S. Schmidt, Rochelle A. Nustad, Ashley Morgan Bussell

Evaluation of classified ground points from National Agriculture Imagery program photogrammetrically derived point clouds

Studies have shown that digital surface models and point clouds generated by the United States Department of Agriculture’s National Agriculture Imagery Program (NAIP) can measure basic forest parameters such as canopy height. However, all measured forest parameters from these studies are evaluated using the differences between NAIP digital surface models (DSMs) and available lidar digital terrain
Authors
Jung-Kuan (Ernie) Liu, Samantha Arundel, Ethan J. Shavers

High resolution identification and quantification of diffuse deep groundwater discharge in mountain rivers using continuous boat-mounted helium measurements

Discharge of deeply sourced groundwater to streams is difficult to locate and quantify, particularly where both discrete and diffuse discharge points exist, but diffuse discharge is one of the primary controls on solute budgets in mountainous watersheds. The noble gas helium is a unique identifier of deep groundwater discharge because groundwater with long residence times is commonly enriched in h
Authors
Connor P. Newman, Eric Humphrey, Matthias Brennwald, W. Payton Gardner, Kelli M Palko, Michael Gooseff, Kip Solomon

Use of otolith microchemistry to determine natal origin for Silver Carp Hypophthalmichthys molitrix in the lower Mississippi River basin

Silver Carp (Hypophthalmichthys molitrix) populations have established and expanded throughout the lower Mississippi River basin (LMRB). Information pertaining to Silver Carp population mixing among rivers within the LMRB is lacking. Documented relations between Silver Carp otolith and river water barium (Ba) and strontium (Sr) microchemical signatures may enable estimation of origins of Silver Ca
Authors
CE Barshinger, MA Eggleton, Jonathan J Spurgeon

Assisted migration of coho salmon: Influences of passage and habitat availability on population dynamics

Assisted migration is a means of introducing a species into a previously unoccupied area. Although this idea is relatively new for many species, there are many extant examples involving fish that can be instructive. We studied a case of assisted migration where upstream access of migrating adult coho salmon Oncorhynchus kisutch over a naturally impassible barrier was established through constructi
Authors
Joseph R. Benjamin, Jason B. Dunham, Nicholas Scheidt, Carla Rothenbuecher, Cory Sipher

Little brown bats (Myotis lucifugus) are resistant to SARS-CoV-2 infection

It has been proposed that the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus that spread through human populations as a pandemic originated in Asian bats. There is concern that infected humans could transmit the virus to native North American bats; therefore, the susceptibility of several North American bat species to the pandemic virus has been experimentally assessed. Big bro
Authors
Jeffrey S. Hall, Sean Nashold, Erik K. Hofmeister, Ariel Elizabeth Leon, Elizabeth Falendysz, Hon S. Ip, Carly M. Malave, Tonie E. Rocke, Mariano Carossino, Udeni B.R. Balasuriya, Susan Knowles

Computational approaches improve evidence synthesis and inform broad fisheries trends

Addressing ecological impacts with effective conservation actions requires information on the links between human pressures and localized responses. Understanding links is a priority for many conservation contexts, including the world's fresh waters, which face intensifying threats to disproportionately high species diversity, including more than half of the world's fish species. Literature synthe
Authors
Gretchen L. Stokes, Abigail Lynch, John V. Flores, Jesse P. Wong, Connor Morang, Chelsie Romulo, Simon Funge-Smith, John Valbo-Jorgensen, Samuel J. Smidt

Modeling the effects of spatial distribution on dynamics of an invading Melaleuca quinquenervia (Cav.) Blake population

To predict the potential success of an invading non-native species, it is important to understand its dynamics and interactions with native species in the early stages of its invasion. In spatially implicit models, mathematical stability criteria are commonly used to predict whether an invading population grows in number in an early time period. But spatial context is important for real invasions
Authors
Yuanming Lu, Junfei Xia, Robert D. Holt, Don DeAngelis
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