Skip to main content
U.S. flag

An official website of the United States government

Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 171224

Metagenomic mapping of cyanobacteria and potential cyanotoxin producing taxa in large rivers of the United States

Cyanobacteria and cyanotoxin producing cyanobacterial blooms are a trending focus of current research. Many studies focus on bloom events in lentic environments such as lakes or ponds. Comparatively few studies have explored lotic environments and fewer still have examined the cyanobacterial communities and potential cyanotoxin producers during ambient, non-bloom conditions. Here we used a metagen
Authors
D.M. Linz, N. Sienkiewicz, I. Struewing, Erin A. Stelzer, Jennifer L. Graham, Jingrang Lu

A framework for prioritizing contaminants in retrospective ecological assessments: Application in the Milwaukee Estuary (Milwaukee, WI)

Watersheds are subjected to diverse anthropogenic inputs, exposing aquatic biota to a wide range of chemicals. Detection of multiple, different chemicals can challenge natural resource managers who often have to determine where to allocate potentially limited resources. Here, we describe a weight-of-evidence framework for retrospectively prioritizing aquatic contaminants. To demonstrate framework
Authors
Erin M Maloney, Daniel L. Villeneuve, Brett R Blackewell, Kelsey Vitense, Steven R. Corsi, Matthew A. Pronschinske, Kathleen Jensen, Gerald T. Ankley

Understanding ecological response to physical characteristics in side channels of a large floodplain-river ecosystem

Side channels in large floodplain rivers serve a variety of important ecological roles, particularly in reaches where habitat conditions have been degraded or diminished. We developed hypotheses regarding side channel ecological structure whereby we expected species richness of young-of-year fishes to generally be higher in shallower, more physically heterogeneous side channels with lower velociti
Authors
Kristen L. Bouska, Molly Sobotka, Todd Slack, Heather Theel

Declines in prey production during the collapse of a tailwater Rainbow Trout population are associated with changing reservoir conditions

ObjectiveUnderstanding how energy moves through food webs and limits productivity at various trophic levels is a central question in aquatic ecology and can provide insight into drivers of fish population dynamics since many fish populations are food limited. In this study, we seek to better understand what factors drove a decline of >85% in the number of Rainbow TroutOncorhynchus mykiss found in
Authors
Michael D. Yard, Charles Yackulic, Josh Korman, Michael Dodrill, Bridget Deemer

Sediment gravity flow frequency offshore central California diminished significantly following the Last Glacial Maximum

A high-resolution multibeam survey from a portion of the San Simeon Channel (offshore Morro Bay, California) captured a zone of recurring troughs and ridges adjacent to prominent submarine meander bends. Through an integrated study using surveying data, sediment core analysis, radiocarbon dating, and stable isotope measurements, we hypothesize that turbidity current event frequency was higher duri
Authors
Stephen C. Dobbs, Charles K. Paull, Eve M. Lundsten, Roberto Gwiazda, David W. Caress, Mary McGann, Marianne M. Coholich, Maureen A.L. Walton, Nora Maria Nieminski, Timothy McHargue, Steven A. Graham

Survival and establishment of captive-reared and translocated giant gartersnakes after release

Many imperiled species face increasing extinction risk that requires interventional management like translocation or captive rearing. The use of translocations to successfully restore or create populations requires that animals survive at recipient sites, information that is often lacking for imperiled species and that can be risky to acquire if not obtained before a species has dwindled in number
Authors
Allison M. Nguyen, Brian D Todd, Brian J. Halstead

Groundwater recharge in northern New England: Meteorological drivers and relations with low streamflow

Meteorological drivers of groundwater recharge for spring (February–June), fall (October–January), and recharge-year (October–June) recharge seasons were evaluated for northern New England and upstate New York from 1989 to 2018. Monthly groundwater recharge was computed at 21 observation wells by subtracting the water levels at the end of each month from the level of the previous month; only posit
Authors
Caitlin Crossett, Glenn A. Hodgkins, Hadley Menk, Lesley-Ann L. Dupigny-Giroux, Robert W. Dudley, Mary D. Lemcke-Stampone, John C. Hammond

Faster growth and larger size at crèche onset are associated with higher offspring survival in Adélie Penguins

We conducted the first assessment of Adélie Penguin (Pygoscelis adeliae) chick survival that accounts for imperfect resighting. We found that when chicks are larger in size when they enter the crèche stage (the period when both parents forage at the same time and chicks are left relatively unprotected), they have a higher probability of survival to fledging. We investigated the relationships betwe
Authors
Scott Jennings, Katie Dugger, Grant Ballard, David Ainley

Generalized additive model estimation of no-flow fractions and L-moments to support flow-duration curve quantile estimation using selected probability distributions for bay and estuary restoration in the Gulf States

Censored and uncensored generalized additive models (GAMs) were developed using streamflow data from 941 U.S. Geological Survey streamflow-gaging stations (streamgages) to predict decadal statistics of daily streamflow for streams draining to the Gulf of Mexico. The modeled decadal statistics comprise no-flow fractions and L-moments of logarithms of nonzero streamflow for six decades (1950–2009).
Authors
Elena Crowley-Ornelas, William H. Asquith, Scott C. Worland

High-frequency time series comparison of Sentinel-1 and Sentinel-2 for open and vegetated water across the United States (2017-2021)

Frequent observations of surface water at fine spatial scales will provide critical data to support the management of aquatic habitat, flood risk and water quality. Sentinel-1 and Sentinel-2 satellites can provide such observations, but algorithms are still needed that perform well across diverse climate and vegetation conditions. We developed surface inundation algorithms for Sentinel-1 and Senti
Authors
Melanie K. Vanderhoof, Laurie C. Alexander, Jay Christensen, Kylen Solvik, Peter Joseph Nieuwlandt, Mallory Annelle Prentiss

Fire modifies plant–soil feedbacks

Although plant–soil feedbacks (interactions between plants and soils, often mediated by soil microbes, abbreviated as PSFs) are widely known to influence patterns of plant diversity at local and landscape scales, these interactions are rarely examined in the context of important environmental factors. Resolving the roles of environmental factors is important because the environmental context may a
Authors
Christopher Warneke, Stephanie G. Yelenik, Lars Brudvig

Hydrodynamics structure plankton communities and interactions in a freshwater tidal estuary

Drivers of phytoplankton and zooplankton dynamics vary spatially and temporally in estuaries due to variation in hydrodynamic exchange and residence time, complicating efforts to understand controls on food web productivity. We conducted approximately monthly (2012–2019; n = 74) longitudinal sampling at 10 fixed stations along a freshwater tidal terminal channel in the San Francisco Estuary, Calif
Authors
Adrianne P Smits, Luke C. Loken, Erwin E Van Nieuwenhuyse, Matthew J. Young, Paul Stumpner, Leah Kammel, Jon R. Burau, Randy A Dahlgren, Tiffany Brown, April Hennessey, Steven Sadro