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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 171816

Na+/HCO3- cotransporter 1 (nbce1) isoform gene expression during smoltification and seawater acclimation of Atlantic salmon

The life history of Atlantic salmon (Salmo salar) includes an initial freshwater phase (parr) that precedes a springtime migration to marine environments as smolts. The development of osmoregulatory systems that will ultimately support the survival of juveniles upon entry into marine habitats is a key aspect of smoltification. While the acquisition of seawater tolerance in all euryhaline species d
Authors
Jason P. Breves, Ian S. McKay, Victor Koltenyuk, Nastasia N. Nelson, Sean C. Lema, Stephen D. McCormick

Characteristics, relationships and precision of direct acoustic-to-seismic coupling measurements from local explosions

Acoustic energy originating from explosions, sonic booms, bolides and thunderclaps have been recorded on seismometers since the 1950s. Direct pressure loading from the passing acoustic wave has been modelled and consistently observed to produce ground deformations of the near surface that have retrograde elliptical particle motions. In the past decade, increased deployments of colocated seismomete
Authors
Robert E. Anthony, Josh Watzak, Adam T. Ringler, David C. Wilson

Overcoming “analysis paralysis” through better climate change scenario planning

This "In Brief" article describes the use of scenario planning to facilitate climate change adaptation in the National Park Service. It summarizes best practices and innovations for using climate change scenario planning, with an emphasis on management outcomes and manager perspectives. The scenario planning approach and management outcomes highlighted in this article are the culmination of more t
Authors
Gregor W. Schuurman, Brian W. Miller, Amy Symstad, Amber N. Runyon, Brecken C. Robb

Effects of flow regulation and drought on geomorphology and floodplain habitat along the Colorado River in Canyonlands National Park, Utah

Streamflow regulation compounded by regional drought has resulted in up to 22% reduction in channel width, changes in channel planform, expansion of riparian vegetation, and alterations to floodplain habitat on the Colorado River in Meander Canyon, Utah. Although some changes in channel width occurred between the 1940s and 1980s, coinciding with major phases of upstream water development, larger d
Authors
Paul Grams, Eric Head, Erich R. Mueller

Prairie grouse and wind energy: The state of the science and implications for risk assessment

How to shape the anticipated build-out of industrial-scale renewable energy in a way that minimizes risk to wildlife remains contentious. This challenge is well-illustrated in the grasslands and shrub-steppe of North America. Here, several endemic species of grouse are the focus of intensive, long-term conservation action by a host of governmental and non-governmental entities, many of whom are no
Authors
John D. Lloyd, Cameron L. Aldridge, Taber D. Allison, Chad W. LeBeau, Lance B. McNew, Virginia L. Winder

Late Paleoproterozoic to early Mesoproterozoic deposition of quartz arenites across southern Laurentia

Supermature siliciclastic sequences were deposited between 1.64 Ga and 1.59 Ga over a broad swath of southern Laurentia in the Archean, Penokean, Yavapai, and Mazatzal Provinces. These siliciclastic sequences are notable for their extreme mineralogical and chemical maturity, being devoid of detrital feldspar and ferromagnesian minerals, containing the clay mineral kaolinite (or its metamorphic equ
Authors
L. Gordon Medaris, Christopher G. Daniel, Michael F. Doe, James V. Jones, Joshua J. Schwartz

Speciation with gene flow in a narrow endemic West Virginia cave salamander (Gyrinophilus subterraneus)

Due to their limited geographic distributions and specialized ecologies, cave species are often highly endemic and can be especially vulnerable to habitat degradation within and surrounding the cave systems they inhabit. We investigated the evolutionary history of the West Virginia Spring Salamander (Gyrinophilus subterraneus), estimated the population trend from historic and current survey data,
Authors
Evan H. Campbell Grant, Kevin P. Mulder, Adrianne B. Brand, Douglas B. Chambers, Addison H. Wynn, Grace Capshaw, Matthew L. Niemiller, John G. Phillips, Jeremy F. Jacobs, Shawn R. Kuchta, Rayna C. Bell

Prioritizing habitats based on abundance and distribution of molting waterfowl in the Teshekpuk Lake Special Area of the National Petroleum Reserve, Alaska

The National Petroleum Reserve in Alaska (NPR-A) encompasses more than 9.5 million hectares of federally managed land on the Arctic Coastal Plain of northern Alaska, where it supports a diversity of wildlife, including millions of migratory birds. Within the NPR-A, Teshekpuk Lake and the surrounding area provide important habitat for migratory birds and this area has been designated by the Bureau
Authors
Paul L. Flint, Vijay P. Patil, Bradley Shults, Sarah J. Thompson

Progression of infection and detection of Pseudoloma neurophilia in zebrafish Danio rerio Hamilton by PCR and histology

Pseudoloma neurophilia is a critical threat to the zebrafish (Danio rerio) model, as it is the most common infectious agent found in research facilities. In this study, our objectives were two-fold: (1) compare the application of diagnostic tools for P. neurophilia and (2) track the progression of infection using PCR and histology. The first experiment showed that whole-body analysis by qPCR (WB-q
Authors
Corbin J. Schuster, Taylor Kreul, Colleen E. Al-Samarrie, James Peterson, Justin L. Sanders, Michael L. Kent

Provenance of Devonian-Carboniferous strata of Colorado: The influence of the Cambrian and the Proterozoic

We report new LA-ICPMS U-Pb detrital zircon ages and sedimentary petrology of silty to sandy limestones and dolostones, as well as calcareous to dolomitic sandstones of the Devonian-Carboniferous (Mississippian) Chaffee Group, as well as detrital zircon ages from the Late Cambrian Sawatch Quartzite and a U-Pb zircon crystallization age on a late Mesoproterozoic (1087.9 13.5 Ma) granitoid of under
Authors
Christopher Holm-Denoma, William A. Matthews, Linda Soar, Mark W. Longman, James W. Hagadorn

Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts

Monitoring is usually among the first actions taken to help inform recovery planning for declining species, but these data are rarely used formally to inform conservation decision making. For example, Central Valley Chinook salmon were once abundant, but anthropogenic activities have led to widespread habitat loss and degradation resulting in significant population declines. Monitoring data sugges
Authors
Patti J. Wohner, Adam Duarte, John Wikert, Brad Cavallo, Steven C. Zeug, James Peterson

Wading bird foraging on a wetland landscape: A comparison of two strategies

Tactile-feeding wading birds, such as wood storks and white ibises, require high densities of prey such as small fishes and crayfish to support themselves and their offspring during the breeding season. Prey availability in wetlands is often determined by seasonal hydrologic pulsing, such as in the subtropical Everglades, where spatial distributions of prey can vary through time, becoming heteroge
Authors
Hyo Won Lee, Donald L. DeAngelis, Simeon Yurek, Stephen Tennenbaum
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