Fish & Wildlife Disease: Avian Disease
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By Biological Threats and Invasive Species Research Program
January 8, 2025
Since 2006, we have partnered with agencies around the world to monitor the spread of highly pathogenic (HPAI) avian influenza. In 2014, our scientists detected three HPAI viruses for the first time in wild birds in North America: H5N2, H5N8, and a recombinant H5N1. In response to HPAI detections, our scientists are working closely with the U.S. Department of Agriculture and other Federal and state agency partners.
Avian malaria is a mosquito-borne bird disease caused by a protozoan parasite (Plasmodium relictum). P. relictum reproduces in avian red blood cells. If the parasite load is sufficiently high, the bird loses red blood cells (anemia). Because red blood cells are critical for moving oxygen about the body, loss of these cells can lead to progressive weakness and, eventually, death. This disease was introduced to Hawaii and native honeycreepers are highly susceptible.
Avian botulism is caused by the soil bacterium, Clostridium botulinum, and causes paralysis and death in birds. Two types of botulism have been found in birds: Type C, which occurs during warmer months across the U.S., and Type E, which is found primarily in the Great Lakes.
Avian Influenza Geonarrative
Avian Influenza Geonarrative
Avian influenza viruses occur naturally in wild birds such as ducks, geese, swans, and gulls. These viruses generally do not cause illness in wild birds but they can be highly pathogenic and cause illness and death in poultry and wildlife. Learn more with this geonarrative.
Climate Change Canary in the Coal Mine
Climate Change Canary in the Coal Mine
Climate change has increased temperatures in high-elevation forests, allowing mosquitoes to reach areas that were once malaria-free. A single bite from an infected mosquito can kill and the death rate may exceed 90 percent for some bird species.
Avian Disease Research
Avian Disease Research
Filter Total Items: 17
Antibiotic Resistant Bacteria in Migratory Birds
Migratory birds, and particularly those using habitats close to human settlements, may be infected with antibiotic resistant bacteria. The USGS is working with public health professionals to understand the role of birds in the maintenance and dispersal of antibiotic resistant bacteria. Additionally, the USGS is investigating how antibiotic resistant bacteria in birds may relate to public and...
Avian Influenza Research
Since 2006, the USGS Alaska Science Center has been part of the State and Federal interagency team for the detection and response to highly pathogenic (HPAI) viruses in North America. Avian influenza or "bird flu" is a viral disease that primarily infects domestic poultry and wild birds. Avian influenza viruses are naturally occurring in wild birds such as ducks, geese, swans, and gulls. These...
Landbird Research in Alaska
On this page, learn about USGS work on Beak Deformities and Boreal Partners in Flight.
Distribution of Highly Pathogenic Avian Influenza in North America, 2021/2022
The first 2021/2022 detection of Eurasian strain (EA) highly pathogenic avian influenza (HPAI) H5N1 in North America occurred in December 2021 in Newfoundland and Labrador, Canada. Subsequently, HPAI EA H5 and EA H5N1 viruses have been confirmed in wild birds, backyard flocks, commercial poultry facilities, and wild mammals in both Canada and the United States. This HPAI distribution map will be...
Avian Influenza Surveillance
The USGS National Wildlife Health Center (NWHC) conducts surveillance in wild birds to facilitate early detection and situational awareness for high consequence pathogens, including highly pathogenic avian influenza (HPAI) viruses.
Avian Malaria Genomic Research Project
Many factors including habitat destruction, invasive plants, non-native predators and competitors, and introduced diseases have decimated the diverse, endemic native forest bird community of Hawai‘i. In particular, avian malaria ( Plasmodium relictum), which is transmitted by the introduced Southern House Mosquito ( Culex quinquefasciatus), has caused dramatic declines and extinctions in many...
New Technologies and Groundwork for Mosquito Control in the Alakai Plateau
Introduced mosquito-borne avian diseases, avian pox and avian malaria, are key limiting factors for endemic Hawaiian forest birds and are, in part, likely responsible for past extinctions and the continued decline of extant species populations. In the last 40 years on the island of Kaua‘i a number of species have become increasingly rare and several are now presumed extinct. Coinciding with these...
Avian Influenza
Avian influenza is a viral disease caused by various strains of avian influenza viruses that can be classified as low pathogenic avian influenza (LPAI) or highly pathogenic avian influenza (HPAI). It remains a global disease with potential high consequence with the potential to threaten wildlife, agriculture, and human health.
Avian Botulism
Botulism is a natural toxin produced by a bacterium ( Clostridium botulinum ) commonly found in the soil. There are several types of botulism toxin some of which can affect humans who eat improperly canned foods. Birds get their own kind of botulism (Type C in Hawaii) that does not affect humans. Botulism type C is concentrated in aquatic invertebrates that filter feed sediments or water. When...
Toxoplasmosis
Toxoplasmosis is caused by a microscopic parasites called a protozoan. The specific name of the protozoan that causes toxoplasmosis is Toxoplasma gondii. T. gondii reproduces in the gut of cats (all members of the Felidae are susceptible). Cats shed the parasite in their feces, and the parasite is ingested by other animals (intermediate hosts) causing disease. Cats can acquire the parasite from...
Avian Ecology and Multi-Species Habitat Use in Pacific Coast Estuaries
Waterbirds such as shorebirds, waders, and ducks depend on healthy and productive estuaries to “fuel up” for long distance migrations along the Pacific Flyway. Estuarine ecosystems include a mosaic of managed, natural, and restoring wetlands, and provide critical stop-over and wintering areas for federally protected migratory bird species. USGS WERC’s Dr. Susan De La Cruz works with federal, state...
Avian Diseases
The Honolulu Field Station provides routine diagnostic support to state and federal agencies in order to determine cause of death in endangered and threatened native birds in Hawaii, US territories, and affiliated states in the Pacific. These activities have resulted in information that was important in the recovery of several species of endangered birds such as Laysan ducks, Nihoa millerbirds...
Avian Pathogens and Vectors - Kahuku Unit of Hawaii Volcanoes National Park
While the Hawaiian avian disease system has been well-studied in the forests of the older section of Hawai‘i Volcanoes National Park (HAVO), and in many other locations throughout the state, nothing was known about avian disease in the new Kahuku Unit of Hawai‘i Volcanoes National Park and the adjacent Kau Forest Reserve. The high elevation forests of Kahuku are the only habitat located on...
Efficacy of Avian Botulism Surveillance and Mitigation Using Detection Canines
Avian botulism causes waterbird mortality in Hawai‘i's wetlands and elsewhere. We will evaluate using trained scent-detection canines (sniffer dogs) as a new tool to survey for the presence of avian botulism. Biologists will compare variables influencing detection probability and detection rates with traditional search methods. The pilot study will test the feasibility of this approach as a new...
Beak Deformities in Landbirds
Over the past 20 years, Alaskans have witnessed a startling increase of beak deformities among Black-capped Chickadees and other species of resident birds. This disease, called avian keratin disorder (AKD), is characterized by debilitating beak overgrowth and other abnormalities of keratinized tissues. Affected birds have difficulty feeding and preening, and may suffer high rates of mortality.
Ecology and Demography of Hawaiian Forest Birds
Many of Hawai‘i’s forest birds have shown significant declines in the past 200 years, with many currently listed as endangered species. Multiple threats have been identified as contributing to declines, including disease, invasive species, habitat loss, and decreased survivorship and productivity caused by introduced predators. Demographic and ecological studies are needed to determine how...
Disease Ecology In the Pacific Basin: Wildlife and Public Health Concerns
Both wildlife and human health in Hawai‘i and other island ecosystems in the Pacific Basin face continued threats from introductions of diseases and vectors. Accidental introduction of mosquito-borne avian malaria and pox virus to Hawai‘i is an outstanding example of how biological invasions can have a profound effect on endemic wildlife. The geographic distribution, density, and community...
Since 2006, we have partnered with agencies around the world to monitor the spread of highly pathogenic (HPAI) avian influenza. In 2014, our scientists detected three HPAI viruses for the first time in wild birds in North America: H5N2, H5N8, and a recombinant H5N1. In response to HPAI detections, our scientists are working closely with the U.S. Department of Agriculture and other Federal and state agency partners.
Avian malaria is a mosquito-borne bird disease caused by a protozoan parasite (Plasmodium relictum). P. relictum reproduces in avian red blood cells. If the parasite load is sufficiently high, the bird loses red blood cells (anemia). Because red blood cells are critical for moving oxygen about the body, loss of these cells can lead to progressive weakness and, eventually, death. This disease was introduced to Hawaii and native honeycreepers are highly susceptible.
Avian botulism is caused by the soil bacterium, Clostridium botulinum, and causes paralysis and death in birds. Two types of botulism have been found in birds: Type C, which occurs during warmer months across the U.S., and Type E, which is found primarily in the Great Lakes.
Avian Influenza Geonarrative
Avian Influenza Geonarrative
Avian influenza viruses occur naturally in wild birds such as ducks, geese, swans, and gulls. These viruses generally do not cause illness in wild birds but they can be highly pathogenic and cause illness and death in poultry and wildlife. Learn more with this geonarrative.
Climate Change Canary in the Coal Mine
Climate Change Canary in the Coal Mine
Climate change has increased temperatures in high-elevation forests, allowing mosquitoes to reach areas that were once malaria-free. A single bite from an infected mosquito can kill and the death rate may exceed 90 percent for some bird species.
Avian Disease Research
Avian Disease Research
Filter Total Items: 17
Antibiotic Resistant Bacteria in Migratory Birds
Migratory birds, and particularly those using habitats close to human settlements, may be infected with antibiotic resistant bacteria. The USGS is working with public health professionals to understand the role of birds in the maintenance and dispersal of antibiotic resistant bacteria. Additionally, the USGS is investigating how antibiotic resistant bacteria in birds may relate to public and...
Avian Influenza Research
Since 2006, the USGS Alaska Science Center has been part of the State and Federal interagency team for the detection and response to highly pathogenic (HPAI) viruses in North America. Avian influenza or "bird flu" is a viral disease that primarily infects domestic poultry and wild birds. Avian influenza viruses are naturally occurring in wild birds such as ducks, geese, swans, and gulls. These...
Landbird Research in Alaska
On this page, learn about USGS work on Beak Deformities and Boreal Partners in Flight.
Distribution of Highly Pathogenic Avian Influenza in North America, 2021/2022
The first 2021/2022 detection of Eurasian strain (EA) highly pathogenic avian influenza (HPAI) H5N1 in North America occurred in December 2021 in Newfoundland and Labrador, Canada. Subsequently, HPAI EA H5 and EA H5N1 viruses have been confirmed in wild birds, backyard flocks, commercial poultry facilities, and wild mammals in both Canada and the United States. This HPAI distribution map will be...
Avian Influenza Surveillance
The USGS National Wildlife Health Center (NWHC) conducts surveillance in wild birds to facilitate early detection and situational awareness for high consequence pathogens, including highly pathogenic avian influenza (HPAI) viruses.
Avian Malaria Genomic Research Project
Many factors including habitat destruction, invasive plants, non-native predators and competitors, and introduced diseases have decimated the diverse, endemic native forest bird community of Hawai‘i. In particular, avian malaria ( Plasmodium relictum), which is transmitted by the introduced Southern House Mosquito ( Culex quinquefasciatus), has caused dramatic declines and extinctions in many...
New Technologies and Groundwork for Mosquito Control in the Alakai Plateau
Introduced mosquito-borne avian diseases, avian pox and avian malaria, are key limiting factors for endemic Hawaiian forest birds and are, in part, likely responsible for past extinctions and the continued decline of extant species populations. In the last 40 years on the island of Kaua‘i a number of species have become increasingly rare and several are now presumed extinct. Coinciding with these...
Avian Influenza
Avian influenza is a viral disease caused by various strains of avian influenza viruses that can be classified as low pathogenic avian influenza (LPAI) or highly pathogenic avian influenza (HPAI). It remains a global disease with potential high consequence with the potential to threaten wildlife, agriculture, and human health.
Avian Botulism
Botulism is a natural toxin produced by a bacterium ( Clostridium botulinum ) commonly found in the soil. There are several types of botulism toxin some of which can affect humans who eat improperly canned foods. Birds get their own kind of botulism (Type C in Hawaii) that does not affect humans. Botulism type C is concentrated in aquatic invertebrates that filter feed sediments or water. When...
Toxoplasmosis
Toxoplasmosis is caused by a microscopic parasites called a protozoan. The specific name of the protozoan that causes toxoplasmosis is Toxoplasma gondii. T. gondii reproduces in the gut of cats (all members of the Felidae are susceptible). Cats shed the parasite in their feces, and the parasite is ingested by other animals (intermediate hosts) causing disease. Cats can acquire the parasite from...
Avian Ecology and Multi-Species Habitat Use in Pacific Coast Estuaries
Waterbirds such as shorebirds, waders, and ducks depend on healthy and productive estuaries to “fuel up” for long distance migrations along the Pacific Flyway. Estuarine ecosystems include a mosaic of managed, natural, and restoring wetlands, and provide critical stop-over and wintering areas for federally protected migratory bird species. USGS WERC’s Dr. Susan De La Cruz works with federal, state...
Avian Diseases
The Honolulu Field Station provides routine diagnostic support to state and federal agencies in order to determine cause of death in endangered and threatened native birds in Hawaii, US territories, and affiliated states in the Pacific. These activities have resulted in information that was important in the recovery of several species of endangered birds such as Laysan ducks, Nihoa millerbirds...
Avian Pathogens and Vectors - Kahuku Unit of Hawaii Volcanoes National Park
While the Hawaiian avian disease system has been well-studied in the forests of the older section of Hawai‘i Volcanoes National Park (HAVO), and in many other locations throughout the state, nothing was known about avian disease in the new Kahuku Unit of Hawai‘i Volcanoes National Park and the adjacent Kau Forest Reserve. The high elevation forests of Kahuku are the only habitat located on...
Efficacy of Avian Botulism Surveillance and Mitigation Using Detection Canines
Avian botulism causes waterbird mortality in Hawai‘i's wetlands and elsewhere. We will evaluate using trained scent-detection canines (sniffer dogs) as a new tool to survey for the presence of avian botulism. Biologists will compare variables influencing detection probability and detection rates with traditional search methods. The pilot study will test the feasibility of this approach as a new...
Beak Deformities in Landbirds
Over the past 20 years, Alaskans have witnessed a startling increase of beak deformities among Black-capped Chickadees and other species of resident birds. This disease, called avian keratin disorder (AKD), is characterized by debilitating beak overgrowth and other abnormalities of keratinized tissues. Affected birds have difficulty feeding and preening, and may suffer high rates of mortality.
Ecology and Demography of Hawaiian Forest Birds
Many of Hawai‘i’s forest birds have shown significant declines in the past 200 years, with many currently listed as endangered species. Multiple threats have been identified as contributing to declines, including disease, invasive species, habitat loss, and decreased survivorship and productivity caused by introduced predators. Demographic and ecological studies are needed to determine how...
Disease Ecology In the Pacific Basin: Wildlife and Public Health Concerns
Both wildlife and human health in Hawai‘i and other island ecosystems in the Pacific Basin face continued threats from introductions of diseases and vectors. Accidental introduction of mosquito-borne avian malaria and pox virus to Hawai‘i is an outstanding example of how biological invasions can have a profound effect on endemic wildlife. The geographic distribution, density, and community...