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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

Effects of microhabitat and land use on stream salamander abundance in the southwest Virginia coalfields

Large-scale land uses such as residential wastewater discharge and coal mining practices, particularly surface coal extraction and associated valley fills, are of particular ecological concern in central Appalachia. Identification and quantification of both alterations across scales are a necessary first-step to mitigate negative consequences to biota. In central Appalachian headwater streams abse
Authors
Sara E. Sweeten, W. Mark Ford

Climate change and the permafrost carbon feedback

Large quantities of organic carbon are stored in frozen soils (permafrost) within Arctic and sub-Arctic regions. A warming climate can induce environmental changes that accelerate the microbial breakdown of organic carbon and the release of the greenhouse gases carbon dioxide and methane. This feedback can accelerate climate change, but the magnitude and timing of greenhouse gas emission from thes
Authors
E.A.G. Schuur, A. David McGuire, C. Schädel, G. Grosse, J. W. Harden, D.J. Hayes, G. Hugelius, C.D. Koven, P. Kuhry, D.M. Lawrence, Susan M. Natali, David Olefeldt, V.E. Romanovsky, K. Schaefer, M.R. Turetsky, Claire C. Treat, J.E. Vonk

A chronicle of a killer alga in the west: Ecology, assessment, and management of Prymnesium parvum blooms

Since the mid-1980s, fish-killing blooms of Prymnesium parvum spread throughout the USA. In the south central USA, P. parvum blooms have commonly spanned hundreds of kilometers. There is much evidence that physiological stress brought on by inorganic nutrient limitation enhances toxicity. Other factors influence toxin production as well, such as stress experienced at low salinity and temperature.
Authors
D. L. Roelke, Aaron Barkoh, Bryan W. Brooks, J. P. Grover, K. D. Hambright, John W. LaClaire, Peter D. R. Moeller, Reynaldo Patiño

The dynamics of avian influenza in western Arctic snow geese: implications for annual and migratory infection patterns

Wild water birds are the natural reservoir for low-pathogenic avian influenza viruses (AIV). However, our ability to investigate the epizootiology of AIV in these migratory populations is challenging, and despite intensive worldwide surveillance, remains poorly understood. We conducted a cross-sectional, retrospective analysis in Pacific Flyway lesser snow geese Chen caerulescens to investigate AI
Authors
Michael D. Samuel, Jeffrey S. Hall, Justin D. Brown, Diana R. Goldberg, Hon S. Ip, Vasily V. Baranyuk

Developing objectives with multiple stakeholders: adaptive management of horseshoe crabs and Red Knots in the Delaware Bay

Structured decision making (SDM) is an increasingly utilized approach and set of tools for addressing complex decisions in environmental management. SDM is a value-focused thinking approach that places paramount importance on first establishing clear management objectives that reflect core values of stakeholders. To be useful for management, objectives must be transparently stated in unambiguous a
Authors
Conor P. McGowan, James E. Lyons, David Smith

Associations between water physicochemistry and Prymnesium parvum presence, abundance, and toxicity in west Texas reservoirs

Toxic blooms of golden alga (Prymnesium parvum) have caused substantial ecological and economic harm in freshwater and marine systems throughout the world. In North America, toxic blooms have impacted freshwater systems including large reservoirs. Management of water chemistry is one proposed option for golden alga control in these systems. The main objective of this study was to assess physicoche
Authors
Matthew M. VanLandeghem, Mukhtar Farooqi, Greg M. Southard, Reynaldo Patiño

Desertification, salinization, and biotic homogenization in a dryland river ecosystem

This study determined long-term changes in fish assemblages, river discharge, salinity, and local precipitation, and examined hydrological drivers of biotic homogenization in a dryland river ecosystem, the Trans-Pecos region of the Rio Grande/Rio Bravo del Norte (USA/Mexico). Historical (1977-1989) and current (2010-2011) fish assemblages were analyzed by rarefaction analysis (species richness), n
Authors
S. Miyazono, Reynaldo Patiño, C.M. Taylor

Spatiotemporal associations of reservoir nutrient characteristics and the invasive, harmful alga Prymnesium parvum in West Texas

Golden alga (Prymnesium parvum) is a harmful alga that has caused ecological and economic harm in freshwater and marine systems worldwide. In inland systems of North America, toxic blooms have nearly eliminated fish populations in some systems. Modifying nutrient profiles through alterations to land or water use may be a viable alternative for golden alga control in reservoirs. The main objective
Authors
Matthew M. VanLandeghem, Mukhtar Farooqi, Greg M. Southard, Reynaldo Patiño

Clutch size declines with elevation in tropical birds

Clutch size commonly decreases with increasing elevation among temperate-zone and subtropical songbird species. Tropical songbirds typically lay small clutches, thus the ability to evolve even smaller clutch sizes at higher elevations is unclear and untested. We conducted a comparative phylogenetic analysis using data gathered from the literature to test whether clutch size varied with elevation a
Authors
A.J. Boyce, Benjamin G. Freeman, Adam E. Mitchell, Thomas E. Martin

Polygonal tundra geomorphological change in response to warming alters future CO2 and CH4 flux on the Barrow Peninsula

The landscape of the Barrow Peninsula in northern Alaska is thought to have formed over centuries to millennia, and is now dominated by ice-wedge polygonal tundra that spans drained thaw-lake basins and interstitial tundra. In nearby tundra regions, studies have identified a rapid increase in thermokarst formation (i.e., pits) over recent decades in response to climate warming, facilitating change
Authors
Mark J. Lara, A. David McGuire, Eugénie S. Euskirchen, Craig E. Tweedie, Kenneth M. Hinkel, Alexei N. Skurikhin, Vladimir E. Romanovsky, Guido Grosse, W. Robert Bolton, Helene Genet

Energy development and avian nest survival in Wyoming, USA: A test of a common disturbance index

Global energy demands continue to result in new and emerging sources of anthropogenic disturbance to populations and systems. Here, we assessed the influence of natural gas development on a critical component of fitness (nest survival) for Brewer’s sparrow (Spizella breweri), sagebrush sparrow (Artemisiospiza nevadensis), and sage thrasher (Oreoscoptes montanus), three species of sagebrush-obligat
Authors
Matthew G. Hethcoat, Anna D. Chalfoun

Masked expression of life-history traits in a highly variable environment

Differing life-history strategies may act as a constraint on reproductive expression that ultimately limits the ability of individual species to respond to changes in the magnitude or frequency of environmental variation, and potentially underlies the variation often inherent in phenotypic and evolved responses to anthropogenic change. Alternatively, if there are environmental cues that predict re
Authors
Jason A. DeBoer, Joseph J. Fontaine, Christopher J. Chizinski, Kevin L. Pope