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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3984

Blue Growth: the 2014 FAO State of the World Fisheries and Aquaculture

The latest United Nations Food and Agriculture Organization report (FAO 2014) addresses the prospect of feeding a human population set to rise to 9.6 billion by 2050. Aquaculture products now provide approximately one-half of all food fish consumed, and fish also provide important food security and economic growth. In the FAO analyses, food fish included finfish, crustaceans, mollusks, amphibians,
Authors
Christine M. Moffitt, Lubia Cajas-Cano

Physical habitat and water quality correlates of crayfish distributions in a mined watershed

In mined watersheds, water quality alters aquatic faunas, but few studies have focused on associations between stream habitat and crayfish distributions. We examined associations of water quality and physical habitat quality on presence/absence of six crayfish species in the upper Kanawha River drainage of southern West Virginia, USA, a region with a long history of surface and mountaintop removal
Authors
Stuart A. Welsh, Zachary J. Loughman

Demographics of piscivorous colonial waterbirds and management implications for ESA-listed salmonids on the Columbia Plateau

We investigated colony size, productivity, and limiting factors for five piscivorous waterbird species nesting at 18 locations on the Columbia Plateau (Washington) during 2004–2010 with emphasis on species with a history of salmonid (Oncorhynchus spp.) depredation. Numbers of nesting Caspian terns (Hydroprogne caspia) and double-crested cormorants (Phalacrocorax auritus) were stable at about 700–1
Authors
Jessica Y. Adkins, Donald E. Lyons, Peter J. Loschl, Daniel D. Roby, Ken Collis, Allen F. Evans, Nathan J. Hostetter

Effects of prey abundance, distribution, visual contrast and morphology on selection by a pelagic piscivore

Most predators eat only a subset of possible prey. However, studies evaluating diet selection rarely measure prey availability in a manner that accounts for temporal–spatial overlap with predators, the sensory mechanisms employed to detect prey, and constraints on prey capture.We evaluated the diet selection of cutthroat trout (Oncorhynchus clarkii) feeding on a diverse planktivore assemblage in L
Authors
Adam G. Hansen, David A. Beauchamp

Transcriptomic analysis of the mussel Elliptio complanata identifies candidate stress-response genes and an abundance of novel or noncoding transcripts

Mussels are useful indicator species of environmental stress and degradation, and the global decline in freshwater mussel diversity and abundance is of conservation concern. Elliptio complanata is a common freshwater mussel of eastern North America that can serve both as an indicator and as an experimental model for understanding mussel physiology and genetics. To support genetic components of the
Authors
Robert S. Cornman, Laura S. Robertson, Heather S. Galbraith, Carrie J. Blakeslee

Environmental stressors afflicting tailwater stream reaches across the United States

The tailwater is the reach of a stream immediately below an impoundment that is hydrologically, physicochemically and biologically altered by the presence and operation of a dam. The overall goal of this study was to gain a nationwide awareness of the issues afflicting tailwater reaches in the United States. Specific objectives included the following: (i) estimate the percentage of reservoirs that
Authors
Leandro E. Miranda, R. M. Krogman

Predicting probability of occurrence and factors affecting distribution and abundance of three Ozark endemic crayfish species at multiple spatial scales

Crayfishes and other freshwater aquatic fauna are particularly at risk globally due to anthropogenic demand, manipulation and exploitation of freshwater resources and yet are often understudied. The Ozark faunal region of Missouri and Arkansas harbours a high level of aquatic biological diversity, especially in regard to endemic crayfishes. Three such endemics, Orconectes eupunctus,Orconectes mar
Authors
Matthew S. Nolen, Daniel D. Magoulick, Robert J. DiStefano, Emily M. Imhoff, Brian K. Wagner

Adélie penguins coping with environmental change: Results from a natural experiment at the edge of their breeding range

We investigated life history responses to extreme variation in physical environmental conditions during a long-term demographic study of Adélie penguins at 3 colonies representing 9% of the world population and the full range of breeding colony sizes. Five years into the 14-year study (1997–2010) two very large icebergs (spanning 1.5 latitude degrees in length) grounded in waters adjacent to breed
Authors
Katie Dugger, Grant Ballard, David G. Ainley, Phil O'B. Lyber, Casey Schine

Latitudinal and photic effects on diel foraging and predation risk in freshwater pelagic ecosystems

1. Clark & Levy (American Naturalist, 131, 1988, 271–290) described an antipredation window for smaller planktivorous fish during crepuscular periods when light permits feeding on zooplankton, but limits visual detection by piscivores. Yet, how the window is influenced by the interaction between light regime, turbidity and cloud cover over a broad latitudinal gradi- ent remains unexplored. 2. W
Authors
Adam G. Hansen, David A. Beauchamp

An integrated modeling approach to estimating Gunnison Sage-Grouse population dynamics: Combining index and demographic data

Evaluation of population dynamics for rare and declining species is often limited to data that are sparse and/or of poor quality. Frequently, the best data available for rare bird species are based on large‐scale, population count data. These data are commonly based on sampling methods that lack consistent sampling effort, do not account for detectability, and are complicated by observer bias. For
Authors
Amy J. Davis, Mevin B. Hooten, Michael L. Phillips, Paul F. Doherty

Potential population and assemblage influences of non-native trout on native nongame fish in Nebraska headwater streams

Non-native trout are currently stocked to support recreational fisheries in headwater streams throughout Nebraska. The influence of non-native trout introductions on native fish populations and their role in structuring fish assemblages in these systems is unknown. The objectives of this study were to determine (i) if the size structure or relative abundance of native fish differs in the presence
Authors
Kelly C. Turek, Mark A. Pegg, Kevin L. Pope, Steve Schainost

Editors are editors, not oracles

Farji-Brener and Kitzberger (2014; hereafter FBK) resurrect the issues of Farji-Brener (2007) concerning manuscripts that are submitted to journals but that are not sent out for peer review: a process we call “reject following editorial review” (RFER). We thank FBK for reviving discussion about this important topic as new challenges, including new publication outlets, peer-review models, and an in
Authors
Dave Schimel, Donald R. Strong, Aaron M. Ellison, Debra P. C. Peters, Sue Silver, Edward A. Johnson, Jayne Belnap, Aimee T. Classen, Timothy E. Essington, Andrew O. Finley, Brian D. Inouye, Emily H. Stanley