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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Bet-hedging and best-bet strategies shape seed dormancy

Seed dormancy (i.e. delayed germination even when conditions are favourable) is a key plant characteristic that occurs among many species worldwide. But, what selective pressures led to seed dormancy? A recent study provides a major analysis of the factors driving this trait at the global scale (Zhang et al., 2022). Using c. 12 000 species and 10 million records across the globe, they conclude tha
Authors
Juli G. Pausas, Byron B Lamont, Jon Keeley, William J. Bond

Temporal coherence patterns of prairie pothole wetlands indicate the importance of landscape linkages and wetland heterogeneity in maintaining biodiversity

Wetland ecosystems are diverse, productive habitats that are essential reservoirs of biodiversity. Not only are they home to numerous wetland-specialist species, but they also provide food, water, and shelter that support terrestrial wildlife populations. However, like observed patterns of biodiversity loss, wetland habitats have experienced widespread loss and degradation. In order to conserve an
Authors
Kyle McLean, David M. Mushet, Jon N. Sweetman

FY22 Technical Report: Evaluation of fish passage for assessment of invasive carp deterrents at locks in the upper Mississippi River

FY22 Technical Report for the project, "Evaluation of fish passage for assessment of invasive carp deterrents at locks in the Upper Mississippi River." This document describes specific methods, highlights, and results that show how progress towards meeting objectives in a timely manner.
Authors
Andrea K. Fritts, Joshua Abner, Mark W. Fritts, James T. Lamer, Mark Cornish

Can non-invasive methods replace radiocollar-based winter counts in a 50-year wolf study? Lessons learned from a three-winter trial

Context: Monitoring low-density, elusive predators such as grey wolves (Canis lupus) has often been undertaken via live-capture and radio-collaring. Recent advances in non-invasive methods suggest live-captures may not be necessary for adequate monitoring. Further, non-invasive methods are considered best practice when possible.Aims: I evaluated whether a suite of non-invasive methods could replac
Authors
Shannon Barber-Meyer

Expression plasticity regulates intraspecific variation in the acclimatization potential of a reef-building coral

Phenotypic plasticity is an important ecological and evolutionary response for organisms experiencing environmental change, but the ubiquity of this capacity within coral species and across symbiont communities is unknown. We exposed ten genotypes of the reef-building coral Montipora capitata with divergent symbiont communities to four thermal pre-exposure profiles and quantified gene expression b
Authors
Crawford Drury, Jenna Dilworth, Eva Majerová, Carlo Caruso, Justin Blaine Greer

Genetics reveal long-distance virus transmission links in Pacific salmon

In the coastal region of Washington State, a major pathogen emergence event occurred between 2007 and 2011 in which steelhead trout (Oncorhynchus mykiss) experienced a high incidence of infection and disease outbreaks due to the rhabdovirus infectious hematopoietic necrosis virus (IHNV). Genetic typing showed that the introduced viruses were in the steelhead-specific MD subgroup of IHNV and indica
Authors
Rachel Breyta, William N. Batts, Gael Kurath

Vote-processing rules for combining control recommendations from multiple models

Mathematical modelling is used during disease outbreaks to compare control interventions. Using multiple models, the best method to combine model recommendations is unclear. Existing methods weight model projections, then rank control interventions using the combined projections, presuming model outputs are directly comparable. However, the way each model represents the epidemiological system will
Authors
William JM Probert, Sam Nicol, Matthew J. Ferrari, Shou-Li Li, Katriona Shea, Michael J. Tildesley, Michael C. Runge

Natural and anthropogenic landscape factors shape functional connectivity of an ecological specialist in urban Southern California

Identifying how natural (i.e., unaltered by human activity) and anthropogenic landscape variables influence contemporary functional connectivity in terrestrial organisms can elucidate the genetic consequences of environmental change. We examine population genetic structure and functional connectivity among populations of a declining species, the Blainville's horned lizard (Phrynosoma blainvillii),
Authors
Sarah M Wenner, Melanie A. Murphy, Kathleen Semple Delaney, Gregory B. Pauly, Jonathan Q. Richmond, Robert N. Fisher, Jeanne M. Robertson

Plague and trace metals in natural systems

All pathogenic organisms are exposed to abiotic influences such as the microclimates and chemical constituents of their environments. Even those pathogens that exist primarily within their hosts or vectors can be influenced directly or indirectly. Yersinia pestis, the flea-borne bacterium causing plague, is influenced by climate and its survival in soil suggests a potentially strong influence of s
Authors
Michael Kosoy, Dean E. Biggins

In hot water? Patterns of macroinvertebrate abundance in Arctic thaw ponds and relationships with environmental variables

Ongoing environmental change across the Arctic is affecting many freshwater ecosystems, including small thaw ponds that support macroinvertebrates, thus potentially affecting important forage for fish and bird species. To accurately predict how fish and wildlife that depend on these macroinvertebrates will be affected by ecosystem change at high latitudes, understanding proximate factors that infl
Authors
Kirsty E. B. Gurney, Joshua C. Koch, Joel A. Schmutz, J. H. Schmidt, Mark S. Wipfli

Growth and survival rates of dispersing free embryos and settled larvae of pallid sturgeon (Scaphirhynchus albus) in the Missouri River, Montana and North Dakota

We released nearly 1.0 million 1-day post-hatch (dph) and 5-dph pallid sturgeon (Scaphirhynchus albus) free embryos in the Missouri River on 1 July 2019 and sequentially captured survivors at multiple sites through a 240-km river reach to quantify daily growth and survival rates during the early life stages. Genetic analysis was used to assign captured fish to released family lots and known ages.
Authors
Patrick Braaten, R.J. Holm, J. A. Powell, E.J. Heist, Amy C. Buhman, Colt Taylor Holley, Aaron J. Delonay, T.M. Haddix, R.H. Wilson, R. B. Jacobson

One shell of a problem: Cumulative threat analysis of male sea turtles indicates high anthropogenic threat for migratory individuals and Gulf of Mexico residents

Human use of oceans has dramatically increased in the 21st century. Sea turtles are vulnerable to anthropogenic stressors in the marine environment because of lengthy migrations between foraging and breeding sites, often along coastal migration corridors. Little is known about how movement and threat interact specifically for male sea turtles. To better understand male sea turtle movement and the
Authors
Micah Ashford, James I. Watling, Kristen Hart