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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Hawaiian forest bird conservation strategies for minimizing the risk of extinction: biological and biocultural considerations

The iconic forest birds of Hawai‘i are facing a conservation crisis. Across the Hawaiian Islands, native forest birds have been experiencing population declines that have accelerated in the last one to two decades. While habitat loss, invasive species, and non-native predators have negatively affected forest bird species for hundreds of years, and continue to do so, introduced diseases, particular
Authors
Eben H. Paxton, Megan Laut, Stanton Enomoto, Michelle Bogardus

The role of satellite telemetry data in 21st century conservation of polar bears (Ursus maritimus)

Satellite telemetry (ST) has played a critical role in the management and conservation of polar bears (Ursus maritimus) over the last 50 years. ST data provide biological information relevant to subpopulation delineation, movements, habitat use, maternal denning, health, human-bear interactions, and accurate estimates of vital rates and abundance. Given that polar bears are distributed at low dens
Authors
Kristin L. Laidre, George M. Durner, Nicholas J Lunn, Eric V. Regehr, Todd C. Atwood, Karyn D. Rode, Jon Aars, Heli Routti, Øystein Wiig, Markus Dyck, Evan S. Richardson, Stephen D Atkinson, Stanislav Belikov, Ian Stirling

Fijian sea krait behavior relates to fine-scale environmental heterogeneity in old-growth coastal forest: The importance of integrated land–sea management for protecting amphibious animals

The importance of terrestrial coastal ecosystems for maintaining healthy coral reef ecosystems remains understudied. Sea kraits are amphibious snakes that require healthy coral reefs for foraging, but little is known about their requirements of terrestrial habitats, where they slough their skin, digest prey, and breed. Using concurrent microclimate measurements and behavior surveys, we show that a
Authors
Christopher G. Lowe, Gunnar Keppel, Kalisi Waqa, Stefan Peters, Robert N. Fisher, Annette Scanlon, Tamara Osborne-Naikatini, Nunia Thomas-Moko

Using a mechanistic framework to model the density of an aquatic parasite Ceratonova shasta

Ceratonova shasta is a myxozoan parasite endemic to the Pacific Northwest of North America that is linked to low survival rates of juvenile salmonids in some watersheds such as the Klamath River basin. The density of C. shasta actinospores in the water column is typically highest in the spring (March–June), and directly influences infection rates for outmigrating juvenile salmonids. Current manage
Authors
H. E. Robinson, Julie D Alexander, Jerri L Bartholomew, Sascha L Hallett, Nicholas J. Hetrick, Russell Perry, Nicholas A. Som

Collaborative hubs: Making the most of predictive epidemic modeling

The COVID-19 pandemic has made it clear that epidemic models play an important role in how governments and the public understand and respond to infectious disease crises. In the early days of the COVID-19 pandemic, models were used first to estimate the true number of infections, then to provide estimates of key parameters, to generate short-term forecasts of outbreak trends, and to quantify the p
Authors
Nicholas G. Reich, Justin Lessler, Sebastian Funk, Cecile Viboud, Alessandro Vespignani, Ryan J Tibshirani, Katriona Shea, Melanie Schienle, Michael C. Runge, Roni Rosenfeld, Evan L Ray, Rene Niehus, Helen C Johnson, Michael A Johansson, Harry Hochheiser, Lauren Gardner, Johannes Bracher, Rebecca K. Borchering, Matthew Biggerstaff

Water availability drives instream conditions and life-history of an imperiled desert fish: A case study to inform water management

In arid ecosystems, available water is a critical, yet limited resource for human consumption, agricultural use, and ecosystem processes—highlighting the importance of developing management strategies to meet the needs of multiple users. Here, we evaluated how water availability influences stream thermal regimes and life-history expressions of Lahontan cutthroat trout (Oncorhynchus clarkii henshaw
Authors
Robert K. Al-Chokhachy, Roger Peka, Erik Horgen, Daniel J. Kaus, Tim Loux, Lisa Heki

Forest bird populations at the Big Island National Wildlife Refuge Complex, Hawai‘i

Endemic Hawaiian forest birds have experienced dramatic population declines. The Big Island National Wildlife Refuge Complex (BINWRC) was created for conservation of endangered Hawaiian forest birds and their habitats. Surveys have been conducted at two units of BINWRC to monitor forest bird populations and their response to management actions. We analyzed survey data from 1987 to 2019 at the Haka
Authors
Steven J. Kendall, Rachel A. Rounds, Richard J. Camp, Ayesha Genz

Fungal endophyte effects on invasive Phragmites australis performance in field and growth chamber environments

Manipulating plant microbiomes may provide control of invasive species. Invasive Phragmites australis has spread rapidly in North American wetlands, causing significant declines in native biodiversity. To test microbiome effects on host growth, we inoculated four common fungal endophytes into replicated Phragmites genotypes and monitored their growth in field and growth chamber environments. Inocu
Authors
Quynh N Quach, Thomas T Thrasher, Kurt P. Kowalski, Keith Clay

Ecological consequences of neonicotinoid mixtures in streams

Neonicotinoid mixtures are common in streams worldwide, but corresponding ecological responses are poorly understood. We combined experimental and observational studies to narrow this knowledge gap. The mesocosm experiment determined that concentrations of the neonicotinoids imidacloprid and clothianidin (range of exposures, 0 to 11.9 μg/liter) above the hazard concentration for 5% of species (0.0
Authors
Travis S. Schmidt, Janet L. Miller, Barbara Mahler, Peter C. Van Metre, Lisa H. Nowell, Mark W. Sandstrom, Daren Carlisle, Patrick W. Moran, Paul M. Bradley

Soil depth and precipitation moderate soil textural effects on seedling survival of a foundation shrub species

In drylands, there is a need for controlled experiments over multiple planting years to examine how woody seedlings respond to soil texture and the potentially interactive effects of soil depth and precipitation. Understanding how multiple environmental factors interactively influence plant establishment is critical to restoration ecology and in this case to broad-scale restoration efforts in west
Authors
Kari E. Veblen, Kyle C. Nehring, Michael C. Duniway, Anna C Knight, Thomas A. Monaco, Eugene W. Schupp, Janis L Boettinger, Juan J Villalba, Steven Fick, Colby C. Brungard, Eric Thacker

Summer/fall diet and macronutrient assimilation in an Arctic predator

Free-ranging predator diet estimation is commonly achieved by applying molecular-based tracers because direct observation is not logistically feasible or robust. However, tracers typically do not represent all dietary macronutrients, which likely obscures resource use as prey proximate composition varies and tissue consumption can be specific. For example, polar bears (Ursus maritimus) preferentia
Authors
Craig A. Stricker, Karyn D. Rode, Brian D. Taras, Jeffrey F. Bromaghin, Lara Horstmann, Lori T. Quakenbush

Seed menus: An integrated decision-support framework for native plant restoration in the Mojave Desert

The combination of ecosystem stressors, rapid climate change, and increasing landscape-scale development has necessitated active restoration across large tracts of disturbed habitats in the arid southwestern United States. In this context, programmatic directives such as the National Seed Strategy for Rehabilitation and Restoration have increasingly emphasized improved restoration practices that p
Authors
Daniel F. Shryock, Lesley A. DeFalco, Todd C. Esque