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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Culverts delay upstream and downstream migrations of river herring (Alosa spp.)

Alewife (Alosa pseudoharengus) and blueback herring (Alosa aestivalis) are iteroparous anadromous fish found throughout the East Coast of North America. The phenology of anadromous fish migrations is important for fitness, and the duration of spawning migrations has been compressed in recent years in response to climate change. Anthropogenic barriers to movement, such as dams and culverts at road-
Authors
Derrick Alcott, Elsa Goerig, Theodore R. Castro-Santos

The sensitivity of a unionid mussel (Lampsilis siliquoidea) to a permitted effluent and elevated potassium in the effluent

Freshwater mussels are one of the most imperiled groups of animals in the world and are among the most sensitive species to a variety of chemicals. However, little is known about the sensitivity of freshwater mussels to wastewater effluents. The objectives of the present study were to (1) assess the toxicity of a permitted effluent, which entered the Deep Fork River, Oklahoma (USA), to a unionid m
Authors
James L. Kunz, Ning Wang, David Martinez, Suzanne Dunn, Danielle M. Cleveland, Jeffery Steevens

miR133b microinjection during early development targets transcripts of sardiomyocyte ion channels and induces oil-like cardiotoxicity in zebrafish (Danio rerio) embryos

Previous studies have shown that altered expression of a family of small noncoding RNAs (microRNAs, or miRs) regulates the expression of downstream mRNAs and is associated with diseases and developmental disorders. miR133b is highly expressed in mammalian cardiac and skeletal muscle, and aberrant expression is associated with cardiac disorders and electrophysiological changes in cardiomyocytes. Si
Authors
Justin Blaine Greer, Jason T. Magnuson, Victoria McGruer, Le Qian, Subham Dasgupta, David C. Volz, Daniel Schlenk

Survival and spawning success of American shad (Alosa sapidissima) in varying temperatures and levels of glochidia infection

Temperature fluctuations and climate change impacts may substantially affect spawning success of fish, especially migratory species with a limited spawning window. Factors affecting American shad (Alosa sapidissima) spawning success and survival were investigated at different temperatures and periods (peak- and late-spawning periods) during the Connecticut River, USA, spawning migration in 2017. W
Authors
Shannon M Bayse, Amy M. Regish, Stephen D. McCormick

Staggered-entry analysis of breeding phenology and occupancy dynamics of Arizona toads from historically occupied habitats of New Mexico, USA

For species with variable phenology, it is often challenging to produce reliable estimates of population dynamics or changes in occupancy. The Arizona Toad (Anaxyrus microscaphus) is a southwestern USA endemic that has been petitioned for legal protection, but status assessments are limited by a lack of information on population trends. Also, timing and consistency of Arizona Toad breeding varies
Authors
MJ Forzley, Mason J. Ryan, IM Latella, JT Giermakowski, Erin L. Muths, Brent H. Sigafus, Blake R. Hossack

Effects of variable-density thinning on non-native understory plants in coniferous forests of the Pacific Northwest

Old-growth forests serve as critical habitat for many sensitive species, but management practices have diminished their prevalence, and former regions of old-growth are now dominated by second-growth stands lacking the structural heterogeneity, diversity, and species richness that these older forests possess. In western Washington state in the Pacific Northwest of the United States, the Olympic Ha
Authors
Yianna Bekris, Janet S. Prevéy, Leslie C. Brodie, Connie Harrington

Role of ingesta particle size in the green turtle grazing strategy, ontogenetic diet shifts, and responses to seagrass declines

Populations of the green turtle (Chelonia mydas), a mega-herbivore that consumes seagrasses, are recovering worldwide. Understanding green turtle adaptations to herbivory and responses to changes in seagrass availability will be critical to interpreting plant–herbivore interactions as green turtle populations continue to rebound. Ingesta particle size and diet composition of two green turtle forag
Authors
Alexandra G. Gulick, Anne B. Meylan, Peter A. Meylan, Kristen Hart, Jennifer A. Gray, Gaelle Roth, Alan B. Bolten, Karen A. Bjorndal

Satellites for long-term monitoring of inland U.S. lakes: The MERIS time series and application for chlorophyll-a

Lakes and other surface fresh waterbodies provide drinking water, recreational and economic opportunities, food, and other critical support for humans, aquatic life, and ecosystem health. Lakes are also productive ecosystems that provide habitats and influence global cycles. Chlorophyll concentration provides a common metric of water quality, and is frequently used as a proxy for lake trophic stat
Authors
Bridget Seegers, P. Jeremy Werdell, Ryan Vandermeulen, Wilson Salls, Richard Stumpf, Blake Schaeffer, Tommy Owens, Sean Bailey, Joel Scott, Keith Loftin

Economic assessment of surface water in the Harney Basin, Oregon

Executive SummaryThe Harney Basin is a closed river basin in southeastern Oregon. Surface water in the basin is used for a variety of social, economic, and ecological benefits. While some surface water uses compete with one another, others are complementary or jointly produce multiple beneficial outcomes. The objective of this study is to conduct an economic assessment of surface water in the basi
Authors
Lucas S. Bair, Matthew Flyr, Christopher Huber

Periodic oscillation and tri-stability in mutualism systems with two consumers

This paper considers mutualistic interactions between two consumers, in which one consumer can consume a resource only by exchange of service for service with the other. By rigorous analysis on the one-resource and two-consumer model with Holling-type I response, we show periodic oscillations and tri-stability in the mutualism system: when their initial densities decrease, the consumers' interacti
Authors
Yuanshi Wang, Hong Wu, Donald L. DeAngelis

Survival and abundance of polar bears in Alaska’s Beaufort Sea, 2001–2016

The Arctic Ocean is undergoing rapid transformation toward a seasonally ice-free ecosystem. As ice-adapted apex predators, polar bears (Ursus maritimus) are challenged to cope with ongoing habitat degradation and changes in their prey base driven by food-web response to climate warming. Knowledge of polar bear response to environmental change is necessary to understand ecosystem dynamics and infor
Authors
Jeffrey F. Bromaghin, David C. Douglas, George M. Durner, Kristin S. Simac, Todd C. Atwood

Modelling presence versus abundance for invasive species risk assessment

AimInvasive species prevention and management can be guided by comparisons of invasion risk across space and among species. Species distribution models are widely used to assess invasion risk and typically estimate suitability for species presence. However, suitability for presence may not capture patterns of abundance and impact. We asked how models estimating suitability for presence versus suit
Authors
Catherine S. Jarnevich, Helen Sofaer, Peder Engelstad