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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Research to inform Caltrans best management practices for reptile and amphibian road crossings

In October of 2014, the U.S. Geological Survey (USGS) began a 5-year project to conduct research to inform Best Management Practices (BMPs) for amphibian and reptile crossing and barrier systems in California. To inform future conservation and transportation planning, this project involved identification of species at highest risk of negative road impacts, creation of geodatabase and spatial mapp
Authors
Cheryl S. Brehme, Robert N. Fisher, Tom E. S. Langton, Anthony P. Clevenger, Esther Adelsheim, Stephanie Barnes, Tristan Edgarian, Brittany Ewing, Stacie A. Hathaway, Michael Hobbs, Jennifer Kingston, A. Launer, Tritia A. Matsuda, Jeremy B. Sebes, C. Vaughn, Elise Watson

Broad-scale surface and atmospheric conditions during large fires in south-central Chile

The unprecedented size of the 2017 wildfires that burned nearly 600,000 hectares of central Chile highlight a need to better understand the climatic conditions under which large fires develop. Here we evaluate synoptic atmospheric conditions at the surface and free troposphere associated with anomalously high (active) versus low (inactive) months of area burned in south-central Chile (ca. 32–41° S
Authors
David B. McWethy, René Garreaud, Andrés Holz, Gregory T. Pederson

Surface water with more natural temperatures promotes physiological and endocrine changes in landlocked Atlantic salmon smolts

Hatchery salmonid smolts are often reared using groundwater with elevated temperatures to maximize growth. Previous work has shown that rearing hatchery smolts in surface water with a more natural thermal regime resulted in increased return rates of adult landlocked Atlantic salmon (Salmo salar). We evaluated whether landlocked Atlantic salmon reared in surface water with a natural temperature reg
Authors
Amy M. Regish, William R. Ardren, Nicholas R Staats, Henry Bouchard, Jonah L. Withers, Theodore R. Castro-Santos, Stephen D. McCormick

Effects of elk and bison herbivory on narrowleaf cottonwood

Ungulate browsing influences the structure and composition of woody plant communities, including species composition and biomass production as well as age distribution, recruitment, and mortality. We evaluated effects of elk and bison herbivory on narrowleaf cottonwood (Populus angustifolia) communities in a semiarid ecosystem in southern Colorado. Cottonwoods in this ecosystem have been aged at ≥
Authors
Linda C. Zeigenfuss, Kathryn A. Schoenecker

Land conversion and pesticide use degrade forage areas for honey bees in America’s beekeeping epicenter

A diverse range of threats have been associated with managed bee declines globally. Recent increases of two known threats, land-use change and pesticide use, have resulted from agricultural expansion and intensification notably in the top honey producing state in the United States (U.S.): North Dakota. This study investigated the dual threat from land conversion and pesticide use surrounding ~14,0
Authors
Dan J. Dixon, Haochi Zheng, Clint R.V. Otto

Demographic responses to density-dependence by two populations of the Florida Tree Snail, Liguus fasciatus (Gastropoda: Orthalicidae), in Everglades National Park

During May-October 1996, we captured and individually marked and released Florida Tree Snails, Liguus fasciatus, from two sites, a subclimax hammock and a large isolated wild tamarind tree, in the Long Pine Key region of Everglades National Park. Populations shared the same two dominant morphs, castaneozonatus and. cingulatus, both of which are strong colonizers. Monthly survivorship between the t
Authors
Walter E. Meshaka, Kenneth G. Rice, Oron L. Bass, Hardin Waddle

Species and population specific gene expression in blood transcriptomes of marine turtles

BackgroundTranscriptomic data has demonstrated utility to advance the study of physiological diversity and organisms’ responses to environmental stressors. However, a lack of genomic resources and challenges associated with collecting high-quality RNA can limit its application for many wild populations. Minimally invasive blood sampling combined with de novo transcriptomic approaches has great pot
Authors
Shreya M. Banjeree, Jamie Adkins Stoll, Camryn D. Allen, Jennifer M. Lynch, Heather S. Harris, Lauren Kenyon, Richard E. Connon, Eleanor J. Sterling, Eugenia Naro-Maciel, Kathryn McFadden, Margaret Lamont, James Benge, Nadia B. Fernandez, Jeffrey A. Seminoff, Scott R. Benson, Rebecca L. Lewison, Tomoharu Eguchi, Tammy M. Summers, Jessy R. Hapdei, Marc R. Rice, Summer Martin, T. Todd Jones, Peter H. Dutton, George H. Balazs, Lisa M. Komoroske

Trophic transfer efficiency in the Lake Superior food web: Assessing the impacts of non-native species

Ecosystem-based management relies on understanding how perturbations influence ecosystem structure and function (e.g., invasive species, exploitation, abiotic changes). However, data on unimpacted systems are scarce; therefore, we often rely on impacted systems to make inferences about ‘natural states.’ Among the Laurentian Great Lakes, Lake Superior provides a unique case study to address non-nat
Authors
Bryan G. Mathias, Thomas R. Hrabik, Joel C. Hoffman, Owen Gorman, Michael J. Seider, Michael E. Sierszen, Mark Vinson, Daniel Yule, Peder M. Yurista

Dynamic landscapes in northwestern North America structured populations of wolverines (Gulo gulo)

Cyclic climatic and glacial fluctuations of the Late Quaternary produced a dynamic biogeographic history for high latitudes. To refine our understanding of this history in northwestern North America, we explored geographic structure in a wide-ranging carnivore, the wolverine (Gulo gulo). We examined genetic variation in populations across mainland Alaska, coastal Southeast Alaska, and mainland wes
Authors
Dianna M Krejsa, Sandra L. Talbot, George K. Sage, Sarah A. Sonsthagen, Thomas S Jung, Audrey J Magoun, Joseph A. Cook

Intensity of grass invasion negatively correlated with population density and age structure of an endangered dune plant across its range

Invasive species are a global threat to ecosystem biodiversity and function; non-native grass invasion has been particularly problematic in sparsely vegetated ecosystems such as open dunes. Native plant population responses to invasion, however, are infrequently translated to landscape scales, limiting the effectiveness of these data for addressing conservation issues. We quantified population den
Authors
Scott Jones, Anna Kennedy, Chase M. Freeman, Karen M. Thorne

Cross-ecosystem fluxes of pesticides from prairie wetlands mediated by aquatic insect emergence: Implications for terrestrial insectivores

Contaminants alter the quantity and quality of insect prey available to terrestrial insectivores. In agricultural regions, the quantity of aquatic insects emerging from freshwaters can be impacted by insecticides originating from surrounding croplands. We hypothesized that, in such regions, adult aquatic insects could also act as vectors of pesticide transfer to terrestrial food webs. To estimate
Authors
Johanna M. Kraus, Kathryn Kuivila, Michelle Hladik, Neil Shook, David M. Mushet, Kelen Dowdy, Rachel Harrington

Using uncrewed aerial vehicles for identifying the extent of invasive Phragmites australis in treatment areas enrolled in an adaptive management program

Higher spatial and temporal resolutions of remote sensing data are likely to be useful for ecological monitoring efforts. There are many different treatment approaches for the introduced European genotype of Phragmites australis, and adaptive management principles are being integrated in at least some long-term monitoring efforts. In this paper, we investigated how natural color and a smaller set
Authors
Colin N. Brooks, Charlotte B. Weinstein, Andrew F. Poley, Amanda G. Grimm, Nicholas P. Marion, Laura Bourgeau-Chavez, Dana Hansen, Kurt P. Kowalski