Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41764
Generic relationships of New World Jerusalem crickets (Orthoptera: Stenopelmatoidea: Stenopelmatinae), including all known species of Stenopelmatus
The New World Jerusalem crickets currently consist of 4 genera: Stenopelmatus Burmeister, 1838, with 33 named entities; Ammopelmatus Tinkham, 1965, with 2 described species; Viscainopelmatus Tinkham, 1970, with 1 described species, and Stenopelmatopterus Gorochov, 1988, with 3 described species. We redefine the generic boundaries of these 4 genera, synonymize Stenopelmatopterus under Stenopelmatus
Authors
David B Weissman, Amy G. Vandergast, Hojun Song, Seunggwan Shin, Duane D McKenna, Norihiro Ueshima
The changes in species composition mediate direct effects of climate change on future fire regimes of boreal forests in northeastern China
Direct effects of climate change (i.e. temperature rise, changes in seasonal precipitation, wind patterns and atmospheric stability) affect fire regimes of boreal forests by altering fire behaviour, fire seasons and fuel moisture. Climate change also alters species composition and fuel characteristics, which subsequently alter fire regimes. However, indirect effects of climate change are often sim
Authors
Chao Huang, Hong S. He, Yu Liang, Todd Hawbaker, Paul D. Henne, Wenru Xu, Peng Gong, Zhiliang Zhu
Gut microbial ecology of the Critically Endangered Fijian crested iguana (Brachylophus vitiensis): Effects of captivity status and host reintroduction on endogenous microbiomes
Animals often exhibit distinct microbial communities when maintained in captivity as compared to when in the wild. Such differentiation may be significant in headstart and reintroduction programs where individuals spend some time in captivity before release into native habitats. Using 16S rRNA gene sequencing, we (i) assessed differences in gut microbial communities between captive and wild Fijian
Authors
Samuel J. Eliades, Josehp C. Brown, Timothy J. Colston, Robert N. Fisher, Jone B. Niukula, Kim Gray, Jhabar Vadada, Sia Rasalato, Cameron D. Siler
Comparing sample bias correction methods for species distribution modeling using virtual species
A key assumption in species distribution modeling (SDM) with presence‐background (PB) methods is that sampling of occurrence localities is unbiased and that any sampling bias is proportional to the background distribution of environmental covariates. This assumption is rarely met when SDM practitioners rely on federated museum records from natural history collections for geo‐located occurrences du
Authors
Rich Inman, Janet Franklin, Todd C. Esque, Kenneth E. Nussear
The species–area relationship for a highly fragmented temperate river system
Despite the importance of species–area relationships (SARs) to conservation, SARs in human‐fragmented rivers have received little attention. Our aim was to test for the presence and strength of SARs for littoral fish assemblages of an extensively dammed river in south‐central Ontario, Canada, and to examine long‐running hypotheses for the drivers of SARs. Twenty‐six navigational dams with locks bu
Authors
Leon M. Carl, Peter C. Esselman, Beth L Sparks-Jackson, Christopher C. Wilson
Drivers of methane flux differ between lakes and reservoirs, complicating global upscaling efforts
Methane is an important greenhouse gas with growing atmospheric concentrations. Freshwater lakes and reservoirs contribute substantially to atmospheric methane concentrations, but the magnitude of this contribution is poorly constrained. Uncertainty stems partially from whether the sites currently sampled represent the global population as well as incomplete knowledge of which environmental variab
Authors
Bridget Deemer, Meredith A. Holgerson
Fipronil pellets reduce flea abundance on black-tailed prairie dogs: Potential tool for plague management and black-footed ferret conservation
In western North America, sylvatic plague (a flea-borne disease) poses a significant risk to endangered black-footed ferrets (Mustela nigripes) and their primary prey, prairie dogs (Cynomys spp.). Pulicides (flea-killing agents) can be used to suppress fleas and thereby manage plague. In South Dakota, US, we tested edible “FipBit” pellets, each containing 0.84 mg fipronil, on free-living black-tai
Authors
David A. Eads, Travis M. Livieri, Phillip Dobesh, Eddie Childers, Lauren Noble, Michele Vasquez, Dean E. Biggins
Reconnaissance of cumulative risk of pesticides and pharmaceuticals in Great Smoky Mountains National Park streams
The United States (US) National Park Service (NPS) manages protected public lands to preserve biodiversity. Exposure to and effects of bioactive organic contaminants in NPS streams are challenges for resource managers. Recent assessment of pesticides and pharmaceuticals in protected-streams within the urbanized NPS Southeast Region (SER) indicated the importance of fluvial inflows from external so
Authors
Paul M. Bradley, Matt A. Kulp, Bradley J. Huffman, Kristin M. Romanok, Kelly L. Smalling, Sara E. Breitmeyer, Jimmy Clark, Celeste A. Journey
Embryo deformities and nesting trends in Kemp’s ridley sea turtles Lepidochelys kempii before and after the Deepwater Horizon oil spill
Kemp’s ridley sea turtles Lepidochelys kempii were disproportionately affected by the Deepwater Horizon (DWH) oil spill, which began on 20 April 2010. Embryo deformities were documented in inviable L. kempii eggs before (2008-2010) and after (2011-2013) the DWH spill in 2 Texas (USA) nesting areas (Upper Texas Coast and Padre Island National Seashore). Additional nesting trends, including clutch s
Authors
Donna J. Shaver, Christian Gredzens, J. Shelby Walker, Céline A. J. Godard-Codding, Janet E. Yacabucci, Amy Frey, Peter H. Dutton, Christopher J. Schmitt
Hydroacoustic survey standardization: Inter-vessel differences in fish densities and potential effects of vessel avoidance
Hydroacoustics is used broadly to assess fish populations in marine and freshwater systems. Large-scale surveys often employ multiple vessels to complete a survey. Vessels can be a source of variation in multi-vessel surveys, and accounting for this variation is critical to precise and accurate assessments, whether as indices or measures of absolute abundance. We examined areal and volumetric dens
Authors
Mark D. DuFour, Patrick Kočovský, J Deller, Paul W. Simonin, Lars G. Rudstam
Investigation of algal toxins in a multispecies seabird die-off in the Bering and Chukchi seas
Between 2014 and 2017, widespread seabird mortality events were documented annually in the Bering and Chukchi seas, concurrent with dramatic reductions of sea ice, warmer than average ocean temperatures, and rapid shifts in marine ecosystems. Among other changes in the marine environment, harmful algal blooms (HABs) that produce the neurotoxins saxitoxin (STX) and domoic acid (DA) have been identi
Authors
Caroline R. Van Hemert, Robert J. Dusek, Matthew M. Smith, Robert Kaler, Gay Sheffield, Lauren M. Divine, Kathy J. Kuletz, Susan Knowles, Julia S. Lankton, D. Ransom Hardison, R. Wayne Litaker, Timothy Jones, Hillary K. Burgess, Julia K. Parrish
Exploration of the 2016 Yellowstone River fish kill and proliferative kidney disease in wild fish populations
Proliferative kidney disease (PKD) is an emerging disease that recently resulted in a large mortality event of salmonids in the Yellowstone River (Montana, USA). Total PKD fish mortalities in the Yellowstone River were estimated in the tens of thousands, which resulted in a multi‐week river closure and an estimated economic loss of US$500,000. This event shocked scientists, managers, and the publi
Authors
Patrick Ross Hutchins, Adam Sepulveda, Hanna Hartikainen, Ken D. Staigmiller, Scott T. Opitz, Renee M. Yamamoto, Amberly Huttinger, Rick J. Cordes, Tammy Weiss, Lacey R. Hopper, Maureen K. Purcell, Beth Okamura