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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41764

Across borders: External factors and prior behaviour influence North Pacific albatross associations with fishing vessels

Understanding encounters between marine predators and fisheries across national borders and outside national jurisdictions offers new perspectives on unwanted interactions to inform ocean management and predator conservation. Although seabird–fisheries overlap has been documented at many scales, remote identification of vessel encounters has lagged because vessel movement data often are lacking.He
Authors
Rachael A Orben, Josh Adams, Michelle M. Hester, Scott A. Shaffer, Robert M. Suryan, Tomo Deguchi, Kiyoaki Ozaki, Fumio Sato, Lindsay C. Young, Corey A. Clatterbuck, Melinda G. Conners, David A Kroodsma, Leigh G Torres

Forecasting ecological responses for wetland restoration planning in Florida's Everglades

The Everglades wetland was once a river of grass, with water flowing slowly through the sawgrass, southward across the landscape. As developers took hold of south Florida, water was sent away from the heart of the Everglades through canals and levees to protect the former wetland for residential and agricultural development. In the 1990s, planning began to restore the Everglades in what is the lar
Authors
Stephanie Romanach, Leonard G. Pearlstine

Sarcoptic mange: An emerging panzootic in wildlife

Sarcoptic mange, a skin infestation caused by the mite Sarcoptes scabiei, is an emerging disease for some species of wildlife, potentially jeopardizing their welfare and conservation. Sarcoptes scabiei has a near-global distribution facilitated by its forms of transmission and use of a large diversity of host species (many of those with broad geographic distribution). In this review, we synthesize
Authors
L. E. Escobar, Scott Carver, Paul C. Cross, Luca Rossi, E. S. Almberg, M. J. Yabsley, K D Niedringhaus, Peach Van Wick, Ernesto Dominguez-Villegas, F.F. Gakuya, Yue Xie, Samer Angelone, Christian Gortázar, Francisca Astorga

Assessment of sea lamprey (Petromyzon marinus) diet using DNA metabarcoding of feces

Sea lamprey (Petromyzon marinus) are invasive in the Laurentian Great Lakes, parasitize large-bodied fishes, and therefore are the focus of an international control program. However, damage caused by sea lamprey to modern day fish stocks remains uncertain because diet analysis of juvenile sea lamprey has been challenging; they feed on blood and are difficult to randomly sample in the lakes. Here,
Authors
Nicholas S. Johnson, Sean A. Lewandoski, Christopher M. Merkes

Genetic structure of Maryland Brook Trout populations: Management implications for a threatened species

Brook Trout Salvelinus fontinalis have declined across their native range due to multiple anthropogenic factors, including landscape alteration and climate change. Although coldwater streams in Maryland (eastern United States) historically supported significant Brook Trout populations, only fragmented remnant populations remain, with the exception of the upper Savage River watershed in western Mar
Authors
Raymond P. Morgan II, David C. Kazyak, Tim L. King, Barbara A. Lubinski, Matthew T. Sell, Alan A Heft, Jess W Jones

The effects of management practices on grassland birds—Lark Sparrow (Chondestes grammacus)

Keys to Lark Sparrow (Chondestes grammacus) management include providing open grasslands with sparse-to-moderate herbaceous and litter cover and a woody component and allowing occasional burning or moderate grazing. Lark Sparrows have been reported to use habitats with 10–63 centimeters (cm) average vegetation height, 10–54 percent grass cover, 9–25 percent forb cover, 4–18 percent shrub cover, 16
Authors
Jill A. Shaffer, Lawrence D. Igl, Douglas H. Johnson, Marriah L. Sondreal, Christopher M. Goldade, Barry D. Parkin, Betty R. Euliss

Distribution, abundance, and genomic diversity of the endangered antioch dunes evening primrose (Oenothera deltoides subsp. howellii) surveyed in 2019

Sand dune ecosystems are highly dynamic landforms found along coastlines and riverine deltas where a supply of sand-sized material is available to be delivered by aquatic and wind environments. These unique ecosystems provide habitat for a variety of endemic and rare plant and animal species. Sand dunes have been affected by human development, sand mining, and shoreline stabilization from invasive

Mapping climate change vulnerability of aquatic-riparian ecosystems using decision-relevant indicators

Climate change has and is projected to continue to alter historical regimes of temperature, precipitation, and hydrology. To assess the vulnerability of climate change from a land management perspective and spatially identify where the most extreme changes are anticipated to occur, we worked in collaboration with land managers to develop a climate change vulnerability map for the midwestern United
Authors
John T. Delaney, Kristen L. Bouska, Josh D. Eash, Patricia J. Heglund, Andrew A Allstadt

Macrogenetic studies must not ignore limitations of genetic markers and scale

Millette et al. (Ecology Letters, 2020, 23:55–67) reported no consistent worldwide anthropogenic effects on animal genetic diversity using repurposed mitochondrial DNA sequences. We reexamine data from this study, describe genetic marker and scale limitations which might lead to misinterpretations with conservation implications, and provide advice to improve future macrogenetic studies.
Authors
Ivan Paz-Vinas, Evelyn L. Jensen, Laura D. Bertola, Martin F. Breed, Brian K. Hand, Margaret Hunter, Francine Kershaw, Deborah M. Leigh, Gordon Luikart, Joachim Mergeay, Joshua M. Miller, Charles B. van Rees, Gernot Segelbacher, Sean M. Hoban

Scalability and performance tradeoffs in quantifying relationships between elevation and tidal wetland plant communities

Elevation is a major driver of plant ecology and sediment dynamics in tidal wetlands, so accurate and precise spatial data are essential for assessing wetland vulnerability to sea-level rise and making forecasts. We performed survey-grade elevation and vegetation surveys of the Global Change Research Wetland, a brackish microtidal wetland in the Chesapeake Bay estuary, Maryland (USA), to both inte
Authors
James R. Holmquist, Lisa Schile-Beers, Kevin J. Buffington, Meng Lu, Thomas J Mozdzer, Jefferson Riera, Donald E. Weller, Meghan Williams, J Patrick Megonigal

A roadmap for sampling and scaling biological nitrogen fixation in terrestrial ecosystems

Accurately quantifying rates and patterns of biological nitrogen fixation (BNF) in terrestrial ecosystems is essential to characterize ecological and biogeochemical interactions, identify mechanistic controls, improve BNF representation in conceptual and numerical modelling, and forecast nitrogen limitation constraints on future carbon (C) cycling.While many resources address the technical advanta
Authors
Fiona M. Soper, Benton Taylor, Joy Winbourne, Michelle Wong, Katherine A Dynarski, Carla R. G. Reis, Mark Peoples, Cory Cleveland, Sasha C. Reed, Duncan Menge, Steven Perakis

Fire frequency impacts soil properties and processes in sagebrush steppe ecosystems of the Columbia Basin

Increased fire frequency in semi-arid ecosystems can alter biochemical soil properties and soil processes that underpin ecosystem structure and functioning, thus threatening native plant communities and the species that rely on them. However, there is much uncertainty about the magnitude of change as soils are exposed to more fires, because soil recovery and changes in fire severity following a fi
Authors
Leslie Nichols, Douglas J. Shinneman, Susan McIlroy, Marie-Anne de Graaff