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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41764

Biology characterization breakout report

The primary goal of the biology characterization breakout group was to identify the strategies, tools, data priorities, and key partnerships needed to conduct baseline biological characterizations of deep-sea benthic environments across the U.S. EEZ in the Pacific. Discussions focused primarily on priorities for the characterization of deep-water (>200-meter depths) benthic biological communities;
Authors
Amanda Demopoulos, Daniel Wagner, Amy Baco-Taylor, David Itano, Diva Amon, Erik E. Cordes, Lisa Levin, Peter H. Edwards, Randall Kosaki, Shirley Pomponi, Steve Gittings

Evaluating and optimizing the use of logistic regression for tree mortality models in the First Order Fire Effects Model (FOFEM)

Wildland fires burn millions of forested hectares annually around the world, affecting biodiversity, carbon storage, hydrologic processes, and ecosystem services largely through fire-induced tree mortality (Bond-Lamberty et al. 2007; Dantas et al. 2016). In spite of this widespread importance, the underlying mechanisms of fire-caused tree mortality remain poorly understood, (Hood et al. 2018). Pos
Authors
C. Alina Cansler, Sharon Hood, J. Morgan Varner, Phillip J. van Mantgem

Recent planform changes in the Upper Mississippi River

Geomorphic changes in the Upper Mississippi River (UMR) have long been a concern of river agencies charged with maintaining and restoring river habitat (GREAT 1980; Jackson et al. 1981; USFWS 1992). Large meandering alluvial rivers like the UMR are expected to constantly change and adjust their fluvial landforms within their riparian corridors as a result of the natural interaction of hydrologic p
Authors
James T. Rogala, Faith A. Fitzpatrick, Jon S. Hendrickson

2020 Four-band aerial imagery testing and acquisition for 2020 land cover/land use mission

The aerial camera testing project lays the groundwork for the collection of aerial imagery that will be used in the creation of the next iteration of systemic land cover/land use data for the Upper Mississippi River System. Prior to acquisition in the summer of 2020, the new 4-band aerial camera will be assessed for image quality at various resolutions and be compared to the camera used for the 20
Authors
Larry R. Robinson

Hatchling emergence ecology of Ouachita map turtles (Graptemys ouachitensis) on the lower Wisconsin River, Wisconsin, USA

Despite its biological importance in shaping both individual fitness and population structure, much remains to be learned about the hatchling emergence ecology of most freshwater turtles. Here, we provide some of the first details on these early life stages for the Ouachita map turtle (Graptemys ouachitensis) obtained during 2015–2017 along the lower Wisconsin River, Iowa County, Wisconsin, and in
Authors
Gregory A Geller, Gary S Casper, Brian J. Halstead

Occurrence of a suite of stream-obligate amphibians in timberlands of Mendocino County, California, examined using environmental DNA

Stream-obligate amphibians are important indicators of ecosystem health in the Pacific Northwest, but distributional information to improve forest management is lacking in many regions. We analyzed archived DNA extracted from water samples in 60 pools in streams on private timberlands in Mendocino County, California, for 3 California Species of Special Concern—Coastal Tailed Frogs (Ascaphus truei)
Authors
Brian J. Halstead, Caren S. Goldberg, Robert B Douglas, Patrick M. Kleeman, David W Ulrich

Dispersal of hatchling Ouachita map turtles (Graptemys ouachitensis) from natural nests on the lower Wisconsin River, Wisconsin, USA

Despite its importance to individual fitness and population dynamics, the dispersal behaviors of most neonate freshwater turtles after nest emergence are poorly known. We studied the initial dispersal tendencies of neonate Ouachita map turtles (Graptemys ouachitensis) exiting natural nests during 2015–2017 along the Wisconsin River, Wisconsin. Overall, dispersal was nonrandom, and hatchlings large
Authors
Gregory A Geller, Gary S Casper, Brian J. Halstead

Biological and practical tradeoffs in planting techniques for submerged aquatic vegetation

Global loss of submerged aquatic vegetation (SAV) and associated ecosystem function has prompted an interest in SAV revegetation, particularly where underlying stressors such as nutrient enrichment are mitigated, yet natural recruitment remains low. Typically, SAV is hand-planted, but alternative reliable and practically scalable SAV planting techniques are needed. In mesocosms, we evaluated five
Authors
C.B. Rohal, L.K. Reynolds, C.R. Adams, C.W. Martin, E. Latimer, Stephen Walsh, J. Slater

Conservation genetics of imperiled striped whipsnake in Washington

Conservation of wide-ranging species is aided by population genetic information that provides insights into adaptive potential, population size, interpopulation connectivity, and even extinction risk in portions of a species range. The Striped Whipsnake (Masticophis taeniatus) occurs across 11 western U.S. states and into Mexico but has experienced population declines in parts of its range, parti
Authors
David Pilliod, Lisa A. Hallock, Mark P. Miller, Thomas D. Mullins, Susan M. Haig

Multilocus metabarcoding of terrestrial leech bloodmeal iDNA increases species richness uncovered in surveys of vertebrate host biodiversity

Leech-derived invertebrate DNA (iDNA) has been successfully leveraged to conduct surveys of vertebrate host biodiversity across the Indo Pacific. However, this technique has been limited methodologically, typically only targeting mammalian 16S rDNA, or both 16S and vertebrate 12S rDNA for leech host determination. To improve the taxonomic richness of vertebrate host species in iDNA surveys, we re-
Authors
Mai Fahmy, Kalani Williams, Michael Tessler, Sarah R. Weiskopf, Evon Hekkala, Mark E. Siddall

Yearly temperature fluctuations and survey speed influence road counts of wintering raptors

Globally, evaluation of population trends is the most pressing research need for many species of conservation concern. Road counts for birds of prey are useful for monitoring long‐term population trends and examining year‐to‐year variations in abundance. We examined data from 2155 road surveys conducted from 2001 to 2018 by community scientists who recorded > 85 000 individuals of 14 species of ra
Authors
Christopher J W McClure, Brian W. Rolek, Gregory W Grove, Todd E. Katzner

Modeling round goby growth in Lake Michigan and Lake Huron with multi-model inference

Although the round goby Neogobius melanostomus has become established throughout the Laurentian Great Lakes, a multi-model inference (MMI) approach toward characterizing round goby growth in the Laurentian Great Lakes has yet to applied using otolith-derived data. Further, spatial variation in round goby growth among lakes has yet to be investigated. For each sex, growth of round gobies at three l
Authors
Youjian Duan, Charles P. Madenjian, Yingming Zhao, Bin Huo