Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41771
Virome of bat guano from nine northern California roosts
Bats are hosts to a large variety of viruses, including many capable of cross species transmissions to other mammals or humans. We characterized the virome in guano from five common bat species in 9 Northern California roosts and a pool of 5 individual bats. Genomes belonging to 14 viral families known to infect mammals and 17 viral families infecting insects or of unknown tropism were detected. N
Authors
Yanpeng Li, Eda Altan, Gabriel Reyes, Brian J. Halstead, Xutao Deng, Eric Delwart
Distribution of giant gartersnakes (Thamnophis gigas) in the Sacramento–San Joaquin Delta, California, 2018–2019
SummaryWe examined the occurrence of giant gartersnakes in the Sacramento–San Joaquin Delta, California, in 2018 and 2019. We made eight captures of seven giant gartersnakes (three females, four males) in 2018, and six captures of six giant gartersnakes (four females, two males) in 2019. Detection probabilities were exceedingly low despite using methods that achieve much higher detection probabili
Authors
Kristen J. Fouts, Richard Kim, Anna C. Jordan, Alexandria M. Fulton, Jonathan P. Rose, Julia S. M. Ersan, Brian J. Halstead
Outsized nutrient contributions from small tributaries to a Great Lake
Excessive nutrient inputs from tributary streams and rivers contribute to harmful algal blooms and coastal ecosystem degradation worldwide. However, the role that small tributaries play in coastal nutrient dynamics remains unknown because most monitoring and regulatory efforts focus only on the largest tributaries. We combined a 6-d sampling effort with discharge modeling to characterize nutrient
Authors
Robert J Mooney, Emily H. Stanley, William C. Rosenthal, Peter C. Esselman, Anthony D Kendall, Peter B. McIntyre
Integrated geophysical analysis provides an alternate interpretation of the northern margin of the North American Midcontinent Rift System, Central Lake Superior
The Midcontinent Rift System (MRS) is a 1.1 Ga sequence of voluminous basaltic eruptions and multiple intrusions followed by widespread sedimentation that extends across the Midcontinent and northern Great Lakes region of North America. Previous workers have commonly used seismic-reflection data (Great Lakes International Multidisciplinary Program on Crustal Evolution [GLIMPCE] line A) to demonstr
Authors
V. J. Grauch, Eric D. Anderson, Samuel J. Heller, Esther K. Stewart, Laurel G. Woodruff
Surface elevation change evaluation in mangrove forests using a low‐cost, rapid‐scan terrestrial laser scanner
Mangrove forests have adapted to sea level rise (SLR) increases by maintaining their forest floor elevation via belowground root growth and surface sediment deposits. Researchers use surface elevation tables (SETs) to monitor surface elevation change (SEC) in mangrove forests, after which this information is used to assess SLR resiliency or to dictate active forest management for vulnerable system
Authors
Ali Rouzbeh Kargar, Richard A. MacKenzie, Alexander Fafard, Ken Krauss, Jan van Aardt
Isolation and characterization of microsatellite loci in merlins (Falco columbarius) and cross-species amplification in gyrfalcons (F. rusticolus) and peregrine falcons (F. peregrinus)
I. Background: Merlins, Falco columbarius, breed throughout temperate and high latitude habitats in Asia, Europe, and North America. Like peregrine falcons, F. peregrinus, merlins underwent population declines during the mid-to-late 20th century, due to organochlorine-based contamination, and have subsequently recovered, at least in North American populations.
II. Methods and Results: To bett
Authors
Joshua M. Hull, George K. Sage, Sarah A. Sonsthagen, Megan C. Gravley, Breanna L. Martinico, Travis L. Booms, Ted Swem, Sandra L. Talbot
A case study of sea lamprey (Petromyzon marinus) control and ecology in a microcosm of the Great Lakes
The Cheboygan River, Michigan, is the only tributary to the upper Great Lakes where sea lamprey (Petromyzon marinus) are known to complete their entire life cycle. The Upper and Lower reaches are separated by the Cheboygan Lock and Dam located about 2 km from Lake Huron. In the Upper River, the Pigeon, Sturgeon, and Maple Rivers provide nursery habitat for larval sea lamprey. Burt and Mullett Lake
Authors
Nicholas S. Johnson, Aaron K. Jubar, David A Keffer, Peter J. Hrodey, Gale Bravener, Lauren E Freitas, Jesse T McCarter, Michael J. Siefkes
Characterization of acoustic detection efficiency using a gliding robotic fish as a mobile receiver platform
BackgroundAutonomous underwater vehicles (AUVs) and animal telemetry have become important tools for understanding the relationships between aquatic organisms and their environment, but more information is needed to guide the development and use of AUVs as effective animal tracking platforms. A forward-facing acoustic telemetry receiver (VR2Tx 69 kHz; VEMCO, Bedford, Nova Scotia) attached to a nov
Authors
Osama Ennasr, Christopher Holbrook, Darryl W. Hondorp, Charles C. Krueger, Demetris Coleman, Pratap Solanki, John Thon, Xiaobo Tan
A large database supports the use of simple models of post-fire tree mortality for thick-barked conifers, with less support for other species
BackgroundPredictive models of post-fire tree and stem mortality are vital for management planning and understanding fire effects. Post-fire tree and stem mortality have been traditionally modeled as a simple empirical function of tree defenses (e.g., bark thickness) and fire injury (e.g., crown scorch). We used the Fire and Tree Mortality database (FTM)—which includes observations of tree mortali
Authors
C. Alina Cansler, Sharon M. Hood, Phillip J. van Mantgem, J. Morgan Varner
Double exposure and dynamic vulnerability: Assessing economic well-being, ecological change and the development of the oil and gas industry in coastal Louisiana
The oil and gas industry has been a powerful driver of economic change in coastal Louisiana for the latter half of the 20th century and into the 21st. Yet, the overall impact of the industry on the economic well-being of host communities is varied, both spatially and temporally. While the majority of Louisiana’s oil and gas production now occurs offshore, processing the extracted product is an ene
Authors
Scott Hemmerling, Tim J. B. Carruthers, Ann Hijuelos, Harris C. Bienn
Larval diet of the rare caddisfly Glyphopsyche missouri (Trichoptera: Limnephilidae) in Missouri, USA
No abstract available.
Authors
Russell G. Rhodes, Barry C. Poulton, William R. Mabee, David E. Bowles
Geomorphic and sedimentary effects of modern climate change: Current and anticipated future conditions in the western United States
Hydroclimatic changes associated with global warming over the past 50 years have been documented widely, but physical landscape responses are poorly understood thus far. Detecting sedimentary and geomorphic signals of modern climate change presents challenges owing to short record lengths, difficulty resolving signals in stochastic natural systems, influences of land use and tectonic activity, lon
Authors
Amy E. East, Joel B. Sankey