Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41771
The snag’s the limit: Habitat selection modeling for the western purple martin in a managed forest landscape
The western purple martin (Progne subis arboricola), an avian insectivore, is a species of conservation concern throughout the Pacific Northwest. Compared to the well-studied eastern subspecies (Progne subis subis), little is known of the life history and biology of the western subspecies. Availability of breeding habitat is believed to be a major limiting factor for western purple martins in fore
Authors
Lorelle M. Sherman, Joan Hagar
Predicting multi-species foraging hotspots for marine turtles in the Gulf of Mexico
Quantifying the distribution of animals and identifying underlying characteristics that define suitable habitat are essential for effective conservation of free-ranging species. Prioritizing areas for conservation is important in managing a geographic extent that has a high level of disturbance and limited conservation resources. We examined the potential use of a species distribution model ensemb
Authors
Ikuko Fujisaki, Kristen Hart, David N. Bucklin, Autumn R. Iverson, Cynthia Rubio, Margaret M. Lamont, Raul de Jesus G.D. Miron, Patrick M. Burchfield, Jaime Pena, Donna J. Shaver
Spatial fingerprint of younger dryas cooling and warming in eastern North America
The Younger Dryas (YD, 12.9–11.7 ka) is the most recent, near-global interval of abrupt climate change with rates similar to modern global warming. Understanding the causes and biodiversity effects of YD climate changes requires determining the spatial fingerprints of past temperature changes. Here we build pollen-based and branched glycerol dialkyl glycerol tetraether-based temperature reconstruc
Authors
David Fastovich, James M. Russell, Stephen T. Jackson, Teresa R. Krause, Shaun A. Marcott, John W. Williams
High frequency of lead exposure in the population of an endangered Australian top predator, the Tasmanian wedge-tailed eagle (Aquila audax fleayi)
Lead poisoning, mainly through incidental ingestion of lead ammunition in carcasses, is a threat to scavenging and predatory bird species worldwide. In Australia, shooting for animal control is widespread, and a range of native scavenging species are susceptible to lead exposure. However, the prevalence of lead exposure in Australia's scavenging and predatory birds is largely unknown. We evaluated
Authors
James M. Pay, Todd E. Katzner, Clare E. Hawkins, Amelia J. Koch, Jason M. Wiersm, William E. Brown, Nick J. Mooney, Elissa Z. Cameron
Relative abundance of coyotes (Canis latrans) influences gray fox (Urocyon cinereoargenteus) occupancy across the eastern United States
Gray fox (Urocyon cinereoargenteus (Schreber, 1775)) populations in portions of the eastern United States have experienced declines whose trajectories differ from those of other mesocarnivore populations. One hypothesis is that gray fox declines may result from interspecific interactions, particularly competition with abundant coyotes (Canis latrans Say, 1823). Alternatively, gray foxes may respon
Authors
Michael E. Egan, Casey C. Day, Todd E. Katzner, Patrick A. Zollner
Advancements towards selective barrier passage by automatic species identification: Applications of deep convolutional neural networks on images of dewatered fish
Invasive species negatively affect enterprises such as fisheries, agriculture, and international trade. In the Laurentian Great Lakes Basin, threats include invasive sea lamprey (Petromyzon marinus) and the four major Chinese carps. Barriers have proven to be an effective mechanism for managing invasive species but are detrimental in that they also limit the migration of desirable, native species.
Authors
Jesse Eickholt, Dylan Kelly, Janine Bryan, Scott M. Miehls, Daniel Zielinski
Pheromone pollution from invasive sea lamprey misguides a native confamilial
Animals living in the Anthropocene search for mates facing a barrage of pollutants. Few studies consider pheromones from invasive species as pollution, but their central role in the lives of many animals indicates cross-reaction among historically allopatric relatives has potentially damaging impacts. We hypothesized the sex pheromone of sea lamprey (Petromyzon marinus), an invasive fish in the L
Authors
Tyler John Buchinger, Skye D. Fissette, Belinda Huerta, Ke Li, Nicholas S. Johnson, Weiming Li
Introduction to life cycles, taxonomy, distribution and basic research techniques
Avian haemosporidian parasites are a closely related group of apicomplexan parasites with important similarities in their life cycles, development, physiology, and reproduction. Current phylogenies based on mitochondrial and nuclear genes reflect more traditional attempts to classify these organisms based on life history characteristics and morphology, but limited sampling from poorly characterize
Authors
Gediminas Valkiunas, Carter T. Atkinson
An interactive data visualization framework for exploring geospatial environmental datasets and model predictions
With the rise of large-scale environmental models comes new challenges for how we best utilize this information in research, management and decision making. Interactive data visualizations can make large and complex datasets easier to access and explore, which can lead to knowledge discovery, hypothesis formation and improved understanding. Here, we present a web-based interactive data visualizati
Authors
Jeffrey D Walker, Benjamin Letcher, Kirk D. Rodgers, Clint C. Muhlfeld, Vincent S. D'Angelo
Using environmental DNA (eDNA) to detect the endangered Spectaclecase Mussel (Margaritifera monodonta)
Margaritifera monodonta, or the Spectaclecase Mussel, is a federally endangered freshwater mussel species that has experienced a 55% reduction in range and is currently concentrated in 3 rivers in the Midwest region of the United States (Gasconade and Meramec rivers, Missouri, and St Croix River, Wisconsin). The detection of new populations by traditional survey methods has been limited because th
Authors
Yer Lor, Theresa M. Schreier, Diane L. Waller, Christopher M. Merkes
Warming of alpine tundra enhances belowground production and shifts community towards resource acquisition traits
Climate warming is expected to stimulate plant growth in high‐elevation and high‐latitude ecosystems, significantly increasing aboveground net primary production (ANPP). However, the effects of simultaneous changes in temperature, snowmelt timing, and summer water availability on total net primary production (NPP)—and elucidation of both above‐ and belowground responses—remain an important area in
Authors
Yan Yang, Julia A. Klein, Daniel E. Winkler, Ahui Peng, Brynne E. Lazarus, Matthew Germino, Katherine Suding, Jane G. Smith, Lara M. Kueppers
Modeling population dynamics with count data
In this chapter, we describe models of open populations that are subject to change over time due to additions and subtractions. Additions may be in the form of recruitment and immigration, and subtractions may be in the form of mortality, emigration, or both. Conceptually, these models are described by the Birth-Immigration-Death-Emigration (BIDE) model of population dynamics (Conroy and Carroll,
Authors
Marc Kery, Andy Royle