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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41772

Effects of harmful algal blooms and associated water-quality on endangered Lost River and shortnose suckers

Anthropogenic eutrophication contributes to harmful blooms of cyanobacteria in freshwater ecosystems worldwide. In Upper Klamath Lake, Oregon, massive blooms of Aphanizomenon flos-aquae and smaller blooms of other cyanobacteria are associated with cyanotoxins, hypoxia, high pH, high concentrations of ammonia, and potentially hypercapnia. Recovery of the endangered Lost River sucker Deltistes luxat
Authors
Summer M. Burdick, David A. Hewitt, Barbara A. Martin, Liam N. Schenk, Stewart A. Rounds

Divergent biotic and abiotic filtering of root endosphere and rhizosphere soil fungal communities along ecological gradients

Plant roots assemble two distinct microbial compartments: the rhizosphere (microbes in soil surrounding roots) and the endosphere (microbes within roots). Our knowledge of fungal community assembly in these compartments is limited, especially in wetlands. We tested the hypothesis that biotic factors would have direct effects on rhizosphere and endosphere assembly, while abiotic factors would have
Authors
Candice Y Lumibao, Elizabeth Kimbrough, Richard Day, William H. Conner, Ken Krauss, Sunshine A Van Bael

Colonisation of the alpine tundra by trees: Alpine neighbours assist late-seral but not early-seral conifer seedlings

BackgroundClimate change is projected to alter the elevation and latitude of treeline globally. Seed germination and seedling survival are critical controls on treeline expansion. Neighbouring alpine plants, either through competition for resources or through altered microclimate, also affect seedlings emerging in the alpine zone. With warming, alpine plant species may interact with each other mor
Authors
Meredith D. Jabis, Matthew Germino, Lara M. Kueppers

Hurricane Sandy effects on coastal marsh elevation change

High-magnitude storm events such as Hurricane Sandy are powerful agents of geomorphic change in coastal marshes, potentially altering their surface elevation trajectories. But how do a storm’s impacts vary across a large region spanning a variety of wetland settings and storm exposures and intensities. We determined the short-term impacts of Hurricane Sandy at 223 surface elevation table–marker ho
Authors
Alice G. Yeates, James Grace, Jennifer H. Olker, Glenn R. Guntenspergen, Donald Cahoon, Susan C. Adamowicz, Shimon C. Anisfeld, Nels Barrett, Alice Benzecry, Linda K. Blum, Rober T Christian, Joseph Grzyb, Ellen Kracauer Hartig, Kelly Hines Leo, Scott Lerberg, James C. Lynch, Nicole Maher, J Patrick Megonigal, William G. Reay, Drexel Siok, Adam Starke, Vincent Turner, Scott Warren

Changes in conservation value from grasslands to savannas to forests: How a temperate canopy cover gradient affects butterfly community composition

Temperate savannas and grasslands are globally threatened. In the Midwest United States of America (USA), for example, oak savannas persist today at a small percentage of recent historic coverage. Therefore, restoration of habitats of low and intermediate canopy cover is a landscape conservation priority that often emphasizes returning tree density to a savanna-like target value. Understanding how
Authors
Ralph Grundel, Gary S. Dulin, Noel B. Pavlovic

The effects of management practices on grassland birds—Baird’s Sparrow (Centronyx bairdii)

Keys to Baird’s Sparrow (Centronyx bairdii) management are providing native or tame grasslands with moderately deep litter, controlling excessive grazing, and curtailing shrub encroachment. Baird’s Sparrows have been reported to use habitats with less than or equal to (≤) 101 centimeters (cm) average vegetation height, 3–46 cm visual obstruction reading (VOR), 15–71 percent grass cover, 5–25 perce
Authors
Jill A. Shaffer, Lawrence D. Igl, Douglas H. Johnson, Marriah L. Sondreal, Christopher M. Goldade, Melvin P. Nenneman, Betty R. Euliss

Modified QuEChERS extraction for the analysis of young-of-year smallmouth bass using GC × GC-TOFMS

Signs of disease, such as external lesions, have been prevalent in smallmouth bass throughout the Susquehanna River Basin, USA. Previous targeted chemical studies in this system have identified known persistent organic pollutants, but a common explanatory link across multiple affected sites remains undetermined. A fast and robust extraction method that can be applied to young-of-year fish is neede
Authors
Paige Teehan, Megan K. Schall, Vicki S. Blazer, Beate Gruber, Frank L Dorman

Can nutrient additions facilitate recovery of Pacific salmon?

Multiple restoration actions have been implemented in response to declining salmon populations. Among these is the addition of salmon carcasses or artificial nutrients to mimic marine-derived nutrients historically provided by large spawning runs of salmon. A key assumption in this approach is that increased nutrients will catalyze salmon population growth. Although effects on aquatic ecosystems h
Authors
Joseph R. Benjamin, James R Bellmore, Emily Whitney, Jason B. Dunham

Structural impacts, carbon losses, and regeneration in mangrove wetlands after two hurricanes on St. John, U.S. Virgin Islands

Hurricanes Irma and Maria ravaged the mangroves of St. John, U.S. Virgin Islands, in 2017. Basal area losses were large (63–100%) and storm losses of carbon associated with aboveground biomass amounted to 11.9–43.5 Mg C/ha. Carbon biomass of dead standing trees increased 8.1–18.3 Mg C/ha among sites, and carbon in coarse woody debris on the forest floor increased 1.9–18.2 Mg C/ha, with effects var
Authors
Ken Krauss, Andrew From, Caroline Rogers, Kevin R.T. Whelan, Kristen W. Grimes, Robert C. Dobbs, Thomas Kelley

Resource segregation at fine spatial scales explains Karner blue butterfly (Lycaeides melissa samuelis) distribution

The resource concentration hypothesis predicts that herbivorous insect density scales positively with plant density because insects are better able to identify, and remain longer in, patches with denser plant resources. While some studies support this hypothesis, others do not. Different explanations have been proposed for this discrepancy, including variation in insect dispersal ability and diet
Authors
Sophia N Chau, Lainey V Bristow, Ralph Grundel, Jessica J Hellmann

Newly documented population extends geographic range and genetic diversity for the Leaf-toed Gecko (Phyllodactylus nocticolus) into the Transverse Ranges of southern California

Between 19 – 30 May 2018, one of us [AW] discovered a disjunct population of Peninsula leaf-toed geckos, Phyllodactylus nocticolus (Phyllodactylidae) on the northern edge of the Coachella Valley in the Little San Bernardino Mountains of the Transverse Ranges (Fig. 1a). The previously northernmost location for the species is Tahquitz Canyon, Riverside Co. (MVZ 212205) in the Peninsular Ranges 20 km
Authors
Dustin A. Wood, Alyssa Worrel-Black, Robert Black, Anna Mitelberg, Mark Fisher, Robert N. Fisher, A. G. Vandergast, Cameron W. Barrows

Dietary fat concentrations influence fatty acid assimilation patterns in Atlantic pollock (Pollachius virens)

A key aspect in the use of fatty acids (FA) to estimate predator diets using Quantitative FA Signature Analysis (QFASA) is the ability to account for FA assimilation through the use of calibration coefficients (CC). Here, we tested the assumption that CC are independent of dietary fat concentrations by feeding Atlantic pollock (Pollachius virens) three formulated diets with very similar FA proport
Authors
Suzanne M. Budge, Katherine Townsend, Santosh P Lall, Jeffrey F. Bromaghin