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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41772

Highly competent native snake hosts extend the range of an introduced parasite beyond its invasive Burmese python host

Invasive Burmese pythons (Python bivittatus ) have introduced a nonnative pentastomid parasite (Raillietiella orientalis ) to southern Florida that has spilled over to infect native snakes. However, the extent of spillover, regarding prevalence and intensity, is unknown. We examined native snakes (n  = 523) and invasive pythons (n  = 1003) collected from Florida to determine the degree to which pa
Authors
Melissa A. Miller, John M. Kinsella, Ray W. Snow, Bryan G. Falk, Robert Reed, Scott M. Goetz, Frank J. Mazzotti, Craig Guyer, Christina M. Romagosa

A mixed length scale model for migrating fluvial bedforms

With the expansion of hydropower, in‐stream converters, flood‐protection infrastructures, and growing concerns on deltas fragile ecosystems, there is a pressing need to evaluate and monitor bedform sediment mass flux. It is critical to estimate real‐time bedform size and migration velocity and provide a theoretical framework to convert easily accessible time histories of bed elevations into spatia
Authors
Michele Guala, Michael Heisel, Arvind Singh, Mirko Musa, Daniel Buscombe, Paul Grams

Transcriptome analysis of testis reveals the effects of developmental exposure to bisphenol a or 17α-ethinylestradiol in medaka (Oryzias latipes)

Endocrine disrupting chemicals (EDCs) can induce abnormalities in organisms via alteration of molecular pathways and subsequent disruption of endocrine functions. Bisphenol A (BPA) and 17α-ethinylestradiol (EE2) are ubiquitous EDCs in the environment. Many aquatic organisms, including fish, are often exposed to varying concentrations of BPA and EE2 throughout their lifespan. Both BPA and EE2 can a
Authors
Ramji K. Bhandari, Xuegeng Wang, Frederick S. vom Saal, Donald E. Tillitt

Informing amphibian conservation efforts with abundance-based metapopulation models

Science-based management strategies are needed to halt or reverse the global decline of amphibians. In many cases, sound management requires reliable models built using monitoring data. Historically, monitoring and statistical modeling efforts have focused on estimating occupancy using detection–nondetection data. Spatial occupancy models are useful for studying colonization–extinction dynamics, b
Authors
Paige E Howell, Blake R. Hossack, Erin L. Muths, Brent H. Sigafus, Richard B. Chandler

Effects of snowpack, temperature, and disease on the demography of a wild population of amphibians

Understanding the demographic consequences of interactions among pathogens, hosts, and weather conditions is critical in determining how amphibian populations respond to disease and in identifying site-specific conservation actions that can be developed to bolster persistence of amphibian populations. We investigated population dynamics in Boreal Toads (Anaxyrus boreas) relative to abiotic (fall t
Authors
Erin L. Muths, Blake R. Hossack, Evan H. Grant, David Pilliod, Brittany A. Mosher

Amphibian population declines: 30 Years of progress in confronting a complex problem

In 1989, it dawned on participants at the First World Congress of Herpetology that observed declines in amphibian populations might actually be global in scope and unprecedented in severity. Three decades of research since then has produced an enormous increase in our knowledge of amphibian ecology and appreciation of the complexity of possible causes for amphibian population declines. In Septembe
Authors
David M. Green, Michael J Lannoo, David LesBarreres, Erin L. Muths

A synthesis of evidence of drivers of amphibian declines

Early calls for robust long-term time series of amphibian population data, stemming from discussion following the first World Congress of Herpetology, are now being realized after 25 yr of focused research. Inference from individual studies and locations have contributed to a basic consensus on drivers of amphibian declines. Until recently there were no large-scale syntheses of long-term time seri
Authors
Evan H. Grant, D. A. W. Miller, Erin L. Muths

The effects of management practices on grassland birds—LeConte’s Sparrow (Ammospiza leconteii)

Keys to LeConte’s Sparrow (Ammospiza leconteii) management include controlling succession and providing uplands and lowlands with tall, thick herbaceous vegetation and thick litter. LeConte’s Sparrows have been reported to use habitats with 30–90 centimeters (cm) average vegetation height, 19–41 cm visual obstruction reading, 35–43 percent grass cover, 16–27 percent forb cover, less than (<) 18 pe
Authors
Jill A. Shaffer, Lawrence D. Igl, Douglas H. Johnson, Marriah L. Sondreal, Christopher M. Goldade, Amy L. Zimmerman, Betty R. Euliss

Sample-size considerations for a study of shorebird nest survival in the 1002 Area, Arctic National Wildlife Refuge, Alaska

Authorization of lease sales for oil development in the 1002 Area of the Arctic National Wildlife Refuge has highlighted gaps in information about biological communities in the area. The U.S. Fish and Wildlife Service, which is planning a study to evaluate spatial variation in the nest survival of tundra-breeding shorebirds to identify hotspots with high nest survival, sought advice from the U.S.
Authors
Emily L. Weiser

The Fire and Tree Mortality Database, for empirical modeling of individual tree mortality after fire

Wildland fires have a multitude of ecological effects in forests, woodlands, and savannas across the globe. A major focus of past research has been on tree mortality from fire, as trees provide a vast range of biological services. We assembled a database of individual-tree records from prescribed fires and wildfires in the United States. The Fire and Tree Mortality (FTM) database includes records
Authors
C. Alina Cansler, Sharon M. Hood, J. Morgan Varner, Phillip J. van Mantgem, Michelle C. Agne, Robert A. Andrus, Matthew P. Ayres, Bruce D. Ayres, Jonathan D. Bakker, Michael A. Battaglia, Barbara J. Bentz, Carolyn R. Breece, James K. Brown, Daniel R. Cluck, Tom W. Coleman, R. Gregory Corace, W. Wallace Covington, Douglas S. Cram, James B. Cronan, Joseph E. Crouse, Adrian Das, Ryan S. Davis, Darci M. Dickinson, Stephen A Fitzgerald, Peter Z. Fule, Lisa M. Ganio, Lindsay M. Grayson, Charles B. Halpern, Jim L. Hanula, Brian J. Harvey, J. Kevin Hiers, David W. Huffman, MaryBeth Keifer, Tara L. Keyser, Leda N. Kobziar, Thomas E. Kolb, Crystal A. Kolden, Karen E. Kopper, Jason R. Kreitler, Jesse K. Kreye, Andrew M. Latimer, Andrew P. Lerch, Maria J. Lombardero, Virginia L. McDaniel, Charles W. McHugh, Joel D. McMillin, Jason J. Moghaddas, Joseph J. O'Brien, Daniel D. B. Perrakis, David W. Peterson, Susan J. Pritchard, Robert A. Progar, Kenneth F. Raffa, Elizabeth D. Reinhardt, Joseph C. Restaino, John P. Roccaforte, Brendan M. Rogers, Kevin C. Ryan, Hugh D. Safford, Alyson E. Santoro, Timothy M. Shearman, Alice M. Shumate, Carolyn H. Sieg, Sheri L. Smith, Rebecca J. Smith, Nathan L. Stephenson, Mary Stuever, Jens Stevens, Michael T. Stoddard, Walter G. Thies, Nicole M. Vaillant, Shelby A. Weiss, Douglas J. Westlind, Travis J. Woolley, Micah C. Wright

Turtles and tortoises are in trouble

Turtles and tortoises (chelonians) have been integral components of global ecosystems for about 220 million years and have played important roles in human culture for at least 400,000 years. The chelonian shell is a remarkable evolutionary adaptation, facilitating success in terrestrial, freshwater and marine ecosystems. Today, more than half of the 360 living species and 482 total taxa (species a
Authors
C.B. Stanford, J.B. Iverson, A.G.J. Rhodin, P.P. van Dijk, R.A. Mittermeier, G. Kuchling, Kristin H. Berry, A. Bertolero, K.A. Bjorndal, T.E.G. Blanck, K. A. Buhlmann, R.L. Burke, J.D. Congdon, T. Diagne, Taylor Edwards, C.C. Eisemberg, J.R. Ennen, G. Forero-Medina, M. Frankel, U. Fritz, N. Gallego-Garcia, A. Georges, J.W Gibbons, S. Gong, E.V. Goode, H.T. Shi, H. Hoang, M.D. Hofmeyr, B.D Horne, R. Hudson, J.O. Juvik, R.A. Kiester, P.V. Koval, M.-A. Lea, P.V. Lindeman, Jeffrey E. Lovich, L. Luiselli, T.E.M. McCormack, G.A. Meyer, V.P. Paez, K. Platt, S.G. Platt, P.C.H. Pritchard, H.R. Quinn, W.M. Roosenburg, J.A. Seminoff, H.B. Shaffer, R. Spencer, J.U. Van Dyke, R.C. Vogt, A.D. Walde