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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41753

Benthic macroinvertebrate response to estuarine emergent marsh restoration across a delta-wide environmental gradient

Benthic invertebrates play vital roles in estuarine ecosystems, but like other taxa they have been excluded from former marshlands by diking and land use conversion. Dike removal is one way of restoring marsh, but the response of benthic invertebrates has been little studied. Also understudied is variation in benthic invertebrate communities across entire deltas, particularly in the Pacific Northw
Authors
Stephen P. Rubin, Melanie J. Davis, Eric E. Grossman, Isa Woo, Susan E. W. De La Cruz, Glynnis Nakai, John Y. Takekawa

Homogenization of soil seed bank communities by fire and invasive species in the Mojave Desert

Soil seed banks help maintain species diversity through temporal storage effects and function as germination pools that can optimize fitness across varying environmental conditions. These characteristics promote the persistence of native plant communities, yet disturbances such as fire and associated invasions by non-native species can disrupt these reserves, fundamentally altering successional tr
Authors
Steven R. Lee, Robert C. Klinger, Matthew L. Brooks, Scott Ferrenberg

Dryland soil recovery after disturbance across soil and climate gradients of the Colorado Plateau

Drylands impacted by energy development often require costly reclamation activities to reconstruct damaged soils and vegetation, yet little is known about the effectiveness of reclamation practices in promoting recovery of soil quality due to a lack of long-term and cross-site studies. Here, we examined paired on-pad and adjacent undisturbed off-pad soil properties over a 22-year chronosequence of
Authors
Kathryn Delores Eckhoff, Sasha C. Reed, John B. Bradford, Nikita C. Daly, Keven Griffen, Robin H. Reibold, Randi Lupardus, Seth M. Munson, Aarin Sengsirirak, Miguel L. Villarreal, Michael C. Duniway

Landscape fragmentation overturns classical metapopulation thinking

Habitat loss and isolation caused by landscape fragmentation represent a growing threat to global biodiversity. Existing theory suggests that the process will lead to a decline in metapopulation viability. However, since most metapopulation models are restricted to simple networks of discrete habitat patches, the effects of real landscape fragmentation, particularly in stochastic environments, are
Authors
Yun Tao, Alan Hastings, Kevin D. Lafferty, Ilkka Hanski, Otso Ovaskainen

Lessons learned from using wild-caught and captive-reared lesser scaup (Aythya affinis) in captive experiments

Waterfowl are housed in captivity for research studies that are infeasible in the wild. Accommodating the unique requirements of semi-aquatic species in captivity while meeting experimental design criteria for research questions can be challenging and may have unknown effects on animal health. Thus, testing and standardizing best husbandry and care practices for waterfowl is necessary to facilitat
Authors
C.R Beach, C.N Jacques, J.D. Lancaster, D.C. Osborne, A.P. Yetter, Rebecca A. Cole, H.M. Hagy, A.M.V. Fournier

Combining terrestrial lidar with single line transects to investigate geomorphic change: A case study on the Upper Verde River, Arizona

The Upper Verde River in northern Arizona, USA is a vital resource for the wildlife and humans that rely on its waters. We characterize the riparian corridor topography using terrestrial laser scanner (TLS) data from 2021 to 2022. We also quantify geomorphic changes associated with human and climate-driven alterations in river flow and vegetation changes by combining the contemporary lidar surveys
Authors
Lauren Lynn Tango, Temuulen Ts. Sankey, Jackson Leonard, Joel B. Sankey, Alan Kasprak

Linking dissolved organic matter composition to landscape properties in wetlands across the United States of America

Wetlands are integral to the global carbon cycle, serving as both a source and a sink for organic carbon. Their potential for carbon storage will likely change in the coming decades in response to higher temperatures and variable precipitation patterns. We characterized the dissolved organic carbon (DOC) and dissolved organic matter (DOM) composition from 12 different wetland sites across the USA
Authors
Martin R. Kurek, Kimberly Wickland, Natalie A. Nichols, Amy M. McKenna, Steven M. Anderson, Mark M. Dornblaser, Nikaan Koupaie-Abyazani, Brett A. Poulin, Sheel Bansal, Jason B. Fellman, Gregory K. Druschel, Emily S. Bernhardt, Robert G.M. Spencer

Stony coral tissue loss disease indirectly alters reef communities

Many Caribbean coral reefs are near collapse due to various threats. An emerging threat, stony coral tissue loss disease (SCTLD), is spreading across the Western Atlantic and Caribbean. Data from the U.S. Virgin Islands reveal how SCTLD spread has reduced the abundance of susceptible coral and crustose coralline algae and increased cyanobacteria, fire coral, and macroalgae. A Caribbean-wide struct
Authors
Sara D. Swaminathan, Kevin D. Lafferty, Nicole S. Knight, Andrew H. Altieri

Season of grazing interacts with soil texture, selecting for associations of biocrust morphogroups

Livestock grazing, a widespread land use in semi-arid systems, is often placed in opposition to the perpetuation of biological soil crusts (“biocrusts”: lichens, mosses, and algal crusts including cyanobacteria) that live on the soil surface and provide ecosystem functions. The composition of biocrusts and vascular plants varies with climate, soils, and disturbance. In general, ruderal mosses and
Authors
Lea A. Condon, Roger Rosentreter, Kari E. Veblen, Peter S. Coates

Integrated science for the study of microplastics in the environment—A strategic science vision for the U.S. Geological Survey

Executive SummaryEvidence of the widespread occurrence of microplastics throughout our environment and exposure to humans and other organisms over the past decade has led to questions about the possibility of health hazards and mitigation of exposures. This document discusses nanoplastics as well as microplastics (referred to solely as microplastics); the microplastics have a range from 1 micromet
Authors
Deborah D. Iwanowicz, Austin K. Baldwin, Larry B. Barber, Vicki S. Blazer, Steven R. Corsi, Joseph W. Duris, Shawn C. Fisher, Michael Focazio, Sarah E. Janssen, Jeramy Roland Jasmann, Dana W. Kolpin, Johanna M. Kraus, Rachael F. Lane, Mari E. Lee, Kristen B. McSwain, Timothy D. Oden, Timothy J. Reilly, Andrew R. Spanjer

A new era of genetic diversity conservation through novel tools and accessible data

As the foundation of biodiversity, genetic diversity is necessary for species to adapt to ecological changes, such as impacts from disease, invasive species, and climate change. Genetic diversity also supports ecosystem resilience and societal innovations. Unfortunately, declines in genetic diversity have been frequently observed in populations of wild and domestic species. Yet the field of popula
Authors
Margaret Hunter, Jessica M. da Silva, Alicia Mastretta-Yanes, Sean M. Hoban

Lead poisoning of raptors: State of the science and cross-discipline mitigation options for a global problem

Lead poisoning is an important global conservation problem for many species of wildlife, especially raptors. Despite the increasing number of individual studies and regional reviews of lead poisoning of raptors, it has been over a decade since this information has been compiled into a comprehensive global review. Here, we summarize the state of knowledge of lead poisoning of raptors, we review dev
Authors
Todd E. Katzner, Deborah J. Pain, Michael McTee, Leland Brown, Sandra Cuadros, Mark Pokras, Vince Slabe., Rick Watson, Guillermo Wiemeyer, Bryan Bedrosian, Jordan O Hampton, Chris N. Parish, James M. Pay, Keisuke Saito, John Schulz