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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41772

Comparative susceptibilities of selected California Chinook salmon and steelhead populations to isolates of L Genogroup Infectious Hematopoietic Necrosis Virus (IHNV)

Salmonid species demonstrate varied susceptibility to the viral pathogen infectious hematopoietic necrosis virus (IHNV). In California conservation hatcheries, juvenile Chinook salmon (Oncorhynchus tshawytscha) have experienced disease outbreaks due to L genogroup IHNV since the 1940s, while indigenous steelhead (anadromous O. mykiss) appear relatively resistant. To characterize factors contributi
Authors
Christin M. Bendorf, Susan C. Yun, Gael Kurath, Ronald P. Hedrick

Understanding the Avian-Impact Offset Method—A tutorial

Biodiversity offsetting, or compensatory mitigation, is increasingly being used in temperate grassland and wetland ecosystems to compensate for unavoidable environmental damage from anthropogenic disturbances such as energy development and road construction. Energy-extraction and -generation facilities continue to proliferate across the natural landscapes of the United States, yet mitigation tools
Authors
Jill A. Shaffer, Charles R. Loesch, Deborah A. Buhl

Nest remains are insufficient to identify predators of waterfowl nests

Context: Nest predation is a leading cause of nest failure for most ground-nesting birds. Methods that allow for accurate classification of fate and identification of predators are important for understanding productivity and conservation strategies. Past studies have used a visual inspection of nest remains to determine nest fate and predict predator identity. Most formal assessments of these met
Authors
Kaylan M. Kemink, Kyle J. Kuechle, Mason L. Sieges, Sam Krohn, Cailey Isaacson, John Palarski, Nick Conrad, Allicyn Nelson, Boyang Liu, Thomas K. Buhl, Susan N. Ellis-Felege

Quality assurance report for Loch Vale Watershed, 2010–19

The Loch Vale Watershed Research and Monitoring Program collects long-term datasets of ecological and biogeochemical parameters in Rocky Mountain National Park to support both (1) management of this protected area and (2) research into watershed-scale ecosystem processes as those processes respond to atmospheric deposition and climate variability. The program collects data on precipitation depth a
Authors
Timothy Weinmann, Jill S. Baron, Amanda Jayo

A summary of water-quality and salt marsh monitoring, Humboldt Bay, California

This report summarizes data-collection activities associated with the U.S. Geological Survey Humboldt Bay Water-Quality and Salt Marsh Monitoring Project. This work was undertaken to gain a comprehensive understanding of water-quality conditions, salt marsh accretion processes, marsh-edge erosion, and soil-carbon storage in Humboldt Bay, California. Multiparameter sondes recorded water temperature
Authors
Jennifer A. Curtis, Karen M. Thorne, Chase M. Freeman, Kevin J. Buffington, Judith Z. Drexler

Multi-decadal sandbar response to flow management downstream from a large dam—The Glen Canyon Dam on the Colorado River in Marble and Grand Canyons, Arizona

Sandbars are an important resource in the Colorado River corridor in Marble and Grand Canyons, Arizona, downstream from Glen Canyon Dam. Sandbars provide aquatic and riparian habitat and are used as campsites by river runners and hikers. The study area is the Colorado River between Glen Canyon Dam and Diamond Creek, which is about 388 kilometers (241 miles) downstream from the dam. Closure of Glen
Authors
Joseph E. Hazel, Matthew A. Kaplinski, Daniel Hamill, Daniel Buscombe, Erich R. Mueller, Robert P. Ross, Keith Kohl, Paul E. Grams

You vs. us: Framing adaptation behavior in terms of private or social benefits

Private actions to mitigate and adapt to climate change may have benefits to both the individual and society. In some cases, an individual may be motivated by appeals that highlight benefits to others, rather than to oneself. We test whether such prosocial framing influences information-seeking behavior to address wildfire risk among homeowners. In a field experiment across ten communities in west
Authors
Hilary Byerly Flint, Paul Cada, Patricia A. Champ, Jamie Gomez, Danny Margoles, James Meldrum, Hannah Brenkert-Smith

Intra-site sources of restoration variability in severely invaded rangeland: Strong temporal effects of herbicide-weather interactions; weak spatial effects of plant-community patch type and litter

Invasions by exotic annual grasses (EAGs) are replacing native perennials in semiarid areas globally, including the vast sagebrush-steppe rangelands of western North America. Efforts to eradicate EAGs and restore perennials have had mixed success, especially in relatively warm and dry areas where EAGs had high dominance prior to intervention. Greater consideration of the ecological sources of vari
Authors
Rebecca Donaldson, Matthew Germino

In-reservoir physical processes modulate aqueous and biological methylmercury export from a seasonally anoxic reservoir

Anoxic conditions within reservoirs related to thermal stratification and oxygen depletion lead to methylmercury (MeHg) production, a key process governing the uptake of mercury in aquatic food webs. Once formed within a reservoir, the timing and magnitude of the biological uptake of MeHg and the relative importance of MeHg export in water versus biological compartments remain poorly understood. W
Authors
Austin K. Baldwin, Collin Eagles-Smith, James Willacker, Brett Poulin, David P. Krabbenhoft, Jesse Naymik, Michael T. Tate, Dain Bates, Nick Gastelecutto, Charles Hoovestol, Christopher F. Larsen, Alysa Muir Yoder, James A. Chandler, Ralph Myers

Distribution and abundance of Southwestern Willow Flycatchers (Empidonax traillii extimus) on the Upper San Luis Rey River, San Diego County, California—2021 data summary

We surveyed for Southwestern Willow Flycatchers (Empidonax traillii extimus; flycatcher) along the upper San Luis Rey River near Lake Henshaw in Santa Ysabel, California, in 2021. Surveys were completed at four locations: three downstream from Lake Henshaw, where surveys occurred from 2015 to 2020 (Rey River Ranch [RRR], Cleveland National Forest [CNF], Vista Irrigation District [VID]), and one at
Authors
Scarlett L. Howell, Barbara E. Kus

Quantifying flow and nonflow management impacts on an endangered fish by integrating data, research, and expert opinion

Managers charged with recovering endangered species in regulated river segments often have limited flexibility to alter flow regimes and want estimates of the expected population benefits associated with both flow and nonflow management actions. Disentangling impacts on different life stages from concurrently applied actions is essential for determining the effectiveness of each action, but diffic
Authors
Charles Yackulic, Thomas P Archdeacon, Richard A. Valdez, Monika Hobbs, Michael D. Porter, Joel Lusk, Ashley M. Tanner, Eric J Gonzales, Debbie Y Lee, Grace M Haggerty

Biosafety practices when working with bats: A guide to field research considerations

Introduction: Field work with bats is an important contribution to many areas of research in environmental biology and ecology, as well as microbiology. Work with bats poses hazards such as bites and scratches, and the potential for exposure to infectious pathogens such as rabies virus. It also exposes researchers to many other potential hazards inherent to field work, such as environmental condit
Authors
Alvaro Aguilar-Setién, Nidia Aréchiga-Ceballos, Gary A. Balsamo, Amy J. Behrman, Hannah K. Frank, Gary R. Fujimoto, Elizabeth Gilman Duane, Thomas Warner Hudson III, Shelley M. Jones, Luis A. Ochoa Carrera, Gregory L. Powell, Carrie Alison Smith, Joni Triantis Van Sickle, Susan E. Vleck