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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Satellite telemetry reveals high-use internesting areas and international foraging extent for loggerhead turtles tagged in southeast Florida, USA

Developing conservation strategies for highly migratory marine species relies on understanding their spatial distributions. Nesting populations of female loggerhead (Caretta caretta) turtles typically travel from widely dispersed foraging areas and make use of common internesting areas between nesting events. Protection of these areas is essential to the conservation of this species. In this study
Authors
Glenn D. Goodwin, Kristen Hart, Abby C. Evans, Derek A. Burkholder

Population and spatial dynamics of desert bighorn sheep in Grand Canyon during an outbreak of respiratory pneumonia

Introduction: Terrestrial species in riverine ecosystems face unique constraints leading to diverging patterns of population structure, connectivity, and disease dynamics. Desert bighorn sheep (Ovis canadensis nelsoni) in Grand Canyon National Park, a large native population in the southwestern USA, offer a unique opportunity to evaluate population patterns and processes in a remote riverine syste
Authors
Clinton W. Epps, P. Brandon Holton, Ryan J. Monello, Rachel S. Crowhurst, Sarah Mccrimmon Gaulke, William Michael Janousek, Tyler G. Creech, Tabitha Graves

Mammalian lures monitored with time-lapse cameras increase detection of pythons and other snakes

BackgroundEnhancing detection of cryptic snakes is critical for the development of conservation and management strategies; yet, finding methods that provide adequate detection remains challenging. Issues with detecting snakes can be particularly problematic for some species, like the invasive Burmese python (Python bivittatus) in the Florida Everglades.MethodsUsing multiple survey methods, we pred
Authors
Marina E. McCampbell, McKayla M. Spencer, Kristen Hart, Gabrielle Link, Andrew J. Watson, Robert A. McCleery

A reproducible manuscript workflow with a Quarto template

Scientists and resource managers increasingly use Markdown-based tools to create reproducible reports and manuscripts. These workflows allow people to use standardized methods that are more reproducible, efficient, and transparent than other standard office tools. We present a Quarto template and demonstrate how this template may be used for a journal, the Journal of Fish and Wildlife Management,
Authors
Richard A. Erickson, Althea A. Archer, Michael N. Fienen

Assessing the vertical accuracy of digital elevation models by quality level and land cover

The vertical accuracy of elevation data in coastal environments is critical because small variations in elevation can affect an area’s exposure to waves, tides, and storm-related flooding. Elevation data contractors typically quantify the vertical accuracy of lidar-derived digital elevation models (DEMs) on a per-project basis to gauge whether the datasets meet quality and accuracy standards. Here
Authors
Minoo Han, Nicholas Enwright, Dean B. Gesch, Jason M. Stoker, Jeffrey J. Danielson, Christopher J. Amante

Back from the brink: Estimating daily and annual abundance of natural-origin salmon smolts from 30-years of mixed-origin capture-recapture data

Evaluating the status and trends of natural-origin anadromous fish populations over time requires robust estimates of out-migrating juvenile abundance. Information on abundance is typically acquired by capturing actively migrating fish as they pass stationary monitoring platforms. Challenges to estimation include protracted migration timing, temporally varying capture probabilities and the contemp
Authors
Dalton Hance, John Plumb, Russell Perry, Kenneth Tiffan

Amur Falcon Falco amurensis

No abstract available.
Authors
Jaume Orta, Guy M. Kirwan, Jeffrey S. Marks, Ryan C. Burner, Sundev Gombobaatar, Paul van Els, Chuenchom Hansasuta

Projected sea-level rise and high tide flooding at De Soto National Memorial, Florida

IntroductionNational parks and preserves in the South Atlantic-Gulf Region contain valuable coastal habitats such as tidal wetlands and mangrove forests, as well as irreplaceable historic buildings and archeological sites located in low-lying areas. These natural and cultural resources are vulnerable to accelerated sea-level rise and escalating high tide flooding events. Through a Natural Resource
Authors
Hana R. Thurman, Nicholas M. Enwright, Michael J. Osland, Davina L. Passeri, Richard H. Day, Bethanie M. Simons

Distribution, abundance, and breeding activities of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2020 annual report

Executive SummaryThe purpose of this report is to provide the Marine Corps with an annual summary of abundance, breeding activity, demography, and habitat use of endangered Least Bell’s Vireos (Vireo bellii pusillus) at Marine Corps Base Camp Pendleton (MCBCP, or Base). Surveys for the Least Bell's Vireo were conducted at MCBCP, California, between April 1 and July 10, 2020. Core survey areas and
Authors
Suellen Lynn, Michelle Treadwell, Barbara E. Kus

Distribution, Abundance, and Breeding Activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2020 Annual Report

Executive SummarySurveys for the endangered Southwestern Willow Flycatcher (Empidonax traillii extimus) were done at Marine Corps Base Camp Pendleton (MCBCP or “Base”), California, between May 4 and July 31, 2020. All of MCBCP’s historically occupied riparian habitat (core survey area) was surveyed for flycatchers in 2020. Additionally, one-fifth of the unoccupied riparian habitat (non-core survey
Authors
Scarlett L. Howell, Barbara E. Kus

Effects of elevated pCO2 on bioenergetics and disease susceptibility in Pacific herring Clupea pallasii

Ocean acidification can affect the immune responses of fish, but effects on pathogen susceptibility remain uncertain. Pacific herring Clupea pallasii were reared from hatch under 3 CO2 partial pressure ( pCO2) treatments (ambient, ∼650 µatm; intermediate, ∼1500 µatm; high, ∼3000 µatm) through metamorphosis (98 d) to evaluate the effects of ocean acidification on bioenergetics and susceptibility to
Authors
Christopher Murray, Jacob L. Gregg, Ashley MacKenzie, Hiruni Jayasekara, Sophie Hall, Terrie Klinger, Paul Hershberger

Demographics of a previously undocumented diamondback terrapin (Malaclemys terrapin) population

Coastal habitats are some of the most imperiled due to climate change and anthropogenic activities. As such, it is important to understand population dynamics of the species that may play a role in regulating coastal systems. Diamondback terrapins in Northwest Florida have been understudied, which has resulted in a gap in our knowledge for this region. To help fill this gap, we conducted a capture
Authors
Daniel J. Catizone, Travis M. Thomas, Christina Romagosa, Margaret Lamont