Skip to main content
U.S. flag

An official website of the United States government

Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Avian communities respond to plant and landscape composition in actively revegetated floodplains of the Colorado River delta in Mexico

We examined the influence of local habitat factors such as plant community composition and species cover, and landscape habitat factors (e.g., land cover types) on the composition of the avian community in an arid-region large river delta (Colorado River). This 106 river km-long study area has experienced restoration through environmental water deliveries and active management of vegetation for ca
Authors
Eduardo Gonzalez-Sargas, Martha Gomez-Sapiens, Osvel Hinojosa-Huera, Steffany Villagomez-Palma, Alejandra Calvo-Fonseca, Joanna Grand, Timothy D. Meehan, Christopher Dodge, Pamela L. Nagler, Carlos Restrepo-Giraldo, Carlos Nieblas, Angela Melendez, Roberto Real Rangel, Patrick B. Shafroth

Enhancing assessments of coastal wetland migration potential with sea-level rise: Accounting for uncertainty in elevation data, tidal data, and future water levels

Sea-level rise rates are predicted to surpass rates of wetland vertical adjustment in the coming decades in many areas, increasing the potential for wetland submergence. Information on where wetland migration is possible can help natural resource managers for planning land acquisition or enhancing habitat connectivity to bolster adaptation of coastal wetlands to rising seas. Elevation-based models
Authors
Nicholas Enwright, Michael Osland, Hana R. Thurman, Claire E. McHenry, William C. Vervaeke, Brett Patton, Davina Passeri, Jason M. Stoker, Richard Day, Bethanie M. Simons

Restoring Pacific Lamprey in the Umpqua River Basin of Oregon: A workshop summary

The Umpqua River Basin in southwestern Oregon (Figure 1) is part of the lands inhabited by the Cow Creek Band of Umpqua Tribe of Indians and an area of active co-management authority. This Basin supports a unique fish fauna, including important populations of Pacific salmon (Oncorhynchus spp.) and steelhead (O. mykiss), and other native fishes that are endemic to the region (Mims et al. 2018). Amo
Authors
Jason B. Dunham, Krista Jones, Kelly C. Coates, Travis Mackie

How much trapping effort is needed for early detection of European green crab?

We present a case study using trapping data and species accumulation theory to assess the sampling effort needed to detect species that are rare in habitats sampled as part of the management of invasive European green crab Carcinus maenas on the coast of Washington State and Salish Sea shorelines, such as is desired for early detection of invasive species. In response to detections of green crab o
Authors
Timothy D. Counihan, Theresa Thom

Applying local and global sensitivity analysis to inform bigheaded carp management

Natural resource managers commonly use population-level models to aid in understanding the status of target populations or the potential implications of management actions. Sensitivity analyses, specifically, local sensitivity analysis (LSA) and global sensitivity analysis (GSA), exist as tools to improve understanding of these models, the importance of specific parameters to model outcomes, and t
Authors
Richard A. Erickson, Benjamin J. Marcek, Hannah Mann Thompson, Brian Schoenung, John M. Dettmers, Michael N. Fienen

Lake Ontario August gillnet survey and Lake Trout assessment, 2023

Lake Ontario lake trout (Salvelinus namaycush) rehabilitation has been annually assessed with fishery independent surveys since 1983, to evaluate program benchmarks and compare observations with management objectives. These surveys provide information on the abundance, strain composition, and condition of the adult lake trout stock, as well as information on levels of natural recruitment, sea lamp
Authors
Brian O'Malley, Scott P. Minihkeim, Olivia Margaret Mitchinson, Scott David Stahl, Michael Connerton, Jessica A. Goretzke, Collin Farrell, Dimitry Gorsky

Realizing the potential of eDNA biodiversity monitoring tools in the marine environment with application to offshore renewable energy

The U.S. Geological Survey (USGS) researches the biological diversity and distribution of species to support management, conservation, and resource use decisions. USGS scientists advance detection and monitoring technologies to assess changes in fish and wildlife populations, biodiversity, and the health of ecosystems. The United States is planning to install 30 gigawatts of offshore marine and wi
Authors
Adam Sepulveda, Cheryl Morrison, Maggie Hunter, Mona Khalil

A genomic hotspot of diversifying selection and structural change in the hoary bat (Lasiurus cinereus)

BackgroundPrevious work found that numerous genes positively selected within the hoary bat (Lasiurus cinereus) lineage are physically clustered in regions of conserved synteny. Here I further validate and expand on those finding utilizing an updated L. cinereus genome assembly and additional bat species as well as other tetrapod outgroups.MethodsA chromosome-level assembly was generated by chromat
Authors
Robert S. Cornman

Stratigraphy, paleoflora, and tectonic setting of the Paleogene Sheep Creek volcanic field, central Alaska

In this paper, we provide new information on the stratigraphy and paleoflora of the Sheep Creek volcanic field in the Alaska Range that bolsters our understanding of a key interval in the tectonic, paleoclimate, and paleoenvironmental history of the northern Cordillera. Although the distribution and basic stratigraphy of these rocks have been previously reported, here we document the stratigraphic
Authors
Timothy White, David Sunderlin, Dwight Bradley

Deep vs shallow: GPS tags reveal a dichotomy in movement patterns of loggerhead turtles foraging in a coastal bay

BackgroundIndividual variation in movement strategies of foraging loggerhead turtles have been documented on the scale of tens to hundreds of kilometers within single ocean basins. Use of different strategies among individuals may reflect variations in resources, predation pressure or competition. It is less common for individual turtles to use different foraging strategies on the scale of kilomet
Authors
Margaret Lamont, Daniel Slone, James P. Reid, Susan M. Butler, Joseph A. Alday

Carbon isotope trends across a century of herbarium specimens suggest CO2 fertilization of C4 grasses.

Increasing atmospheric CO2 is changing the dynamics of tropical savanna vegetation. C3 trees and grasses are known to experience CO2 fertilization, whereas responses to CO2 by C4 grasses are more ambiguous.Here, we sample stable carbon isotope trends in herbarium collections of South African C4 and C3 grasses to reconstruct 13C discrimination.We found that C3 grasses showed no trends in 13C discri
Authors
Isa del Toro, Madelon Florence Case, Allison Karp, Jasper Slingsby, A. Carla Staver

Retrospective review of the pathology of American pikas

American pikas (Ochotona princeps) are small lagomorphs that live in mountainous talus areas of western North America. Studies on the histopathology of American pikas are limited. We summarize here the clinical histories, and gross and histologic findings of 12 American pikas, including 9 captive (wild-caught) and 3 wild animals. Death was often attributed to stress (transport, handling, anesthesi
Authors
Adrienne Barrett, Kali Holder, Susan Knowles, Elise E. B. LaDouceur