Skip to main content
U.S. flag

An official website of the United States government

Publications

These publications showcase the significant science conducted in our Science Centers.

Filter Total Items: 16783

A fishery after the decline: The Susquehanna River Smallmouth Bass story

The Smallmouth Bass Micropterus dolomieu fishery in the Susquehanna River basin, Pennsylvania, is one of the most socioeconomically important fisheries in the region and has recently undergone considerable changes. These changes started in 2005, when disease was documented in young-of-the-year (age-0) Smallmouth Bass. Shortly thereafter, declines in abundance of both juveniles and adults were obse
Authors
Megan K. Schall, Geoffrey D. Smith, Vicki S. Blazer, Heather L. Walsh, Yan Li, Tyler Wagner

Implanted satellite transmitters affect sea duck movement patterns at short- and long-term time scales

Studies of the effects of transmitters on wildlife often focus on survival. However, non-lethal behavioral changes resulting from radiomarking have the potential to affect inferences from telemetry data and may vary based on individual and environmental characteristics. We used a long-term, multi-species tracking study of sea ducks to assess behavioral patterns at multiple temporal scales followin
Authors
Juliet S. Lamb, Peter WC Paton, Jason E. Osenkowski, Shannon S. Badzinski, Alicia Berlin, Timothy D. Bowman, Chris Dwyer, Luke J. Fara, Scott G. Gilliland, Kevin P. Kenow, Christine Lepage, Mark L. Mallory, Glenn H. Olsen, Matthew Perry, Scott A. Petrie, Jean-Pierre L. Savard, Lucas Savoy, Michael L. Schummer, Caleb S. Spiegel, Scott R. McWilliams

Estimating streamflow and base flow within the nontidal Chesapeake Bay riverine system

Daily mean streamflow was estimated for all the nontidal parts of the Chesapeake Bay riverine system with the Unit Flows in Networks of Channels computer application using measured streamflow at the most downstream gage of selected rivers. The streamflows estimated by the Unit Flows in Networks of Channels computer application were aggregated at the 12-digit Hydrologic Unit Code level, after which
Authors
Patrick C. Buffington, Paul D. Capel

Groundwater quality in relation to drinking water health standards and geochemical characteristics for 54 domestic wells in Clinton County, Pennsylvania, 2017

Despite the reliance on groundwater by approximately 2.4 million rural Pennsylvania residents, publicly available data to characterize the quality of private well water are limited. As part of a regional effort to characterize groundwater in rural areas of Pennsylvania, samples from 54 domestic wells in Clinton County were collected and analyzed in 2017. The samples were evaluated for a wide range
Authors
John W. Clune, Charles A. Cravotta

Sediment delivery to marsh platforms minimized by source decoupling and flux convergence

Sediment supply is a primary factor in determining marsh response to sea level rise and is typically approximated through high‐resolution measurements of suspended sediment concentrations (SSCs) from adjacent tidal channels. However, understanding sediment transport across the marsh itself remains limited by discontinuous measurements of SSC over individual tidal cycles. Here, we use an array of o
Authors
Daniel Coleman, Neil K. Ganju, Matthew Kirwan

Atlantic salmon (Salmo salar) exposed to different preparatory photoperiods during smoltification show varying responses in gill Na+/K+-ATPase, salinity-specific mRNA transcription and ionocyte differentiation

Control of the parr-smolt transformation (or smoltification) is crucial for the husbandry and successful seawater (SW) transfer of Atlantic salmon (Salmo salar) reared in freshwater (FW) hatcheries. Photoperiod is an important environmental signal that initiates the complex physiological, morphological and behavioural changes that coincide with marine migration. While the use of long-day photoperi
Authors
Christian A. van Rijn, Paul L. Jones, Aaron G. Schultz, Brad S. Evans, Stephen D. McCormick, Luis O.B. Afonso

11‑Deoxycortisol controls hydromineral balance in the most basal osmoregulating vertebrate, sea lamprey (Petromyzon marinus)

It is unknown whether and how osmoregulation is controlled by corticosteroid signaling in the phylogenetically basal vertebrate group Agnatha, including lampreys and hagfishes. It is known that a truncated steroid biosynthetic pathway in lampreys produces two predominant circulating corticosteroids, 11-deoxycortisol (S) and 11-deoxycorticosterone (DOC). Furthermore, lampreys express only a single,
Authors
Ciaran A. Shaughnessy, Andre Barany-Ruiz, Stephen D. McCormick

Taxonomic evaluation of the Grallaria rufula (Rufous Antpitta) complex (Aves: Passeriformes: Grallariidae) distinguishes sixteen species

Populations in the Rufous Antpitta (Grallaria rufula) complex occupy humid montane forests of the Andes from northern Colombia and adjacent Venezuela to central Bolivia. Their tawny to cinnamon-colored plumages are generally uniform, featuring subtle variation in hue and saturation across this range. In contrast to their conservative plumage, substantial vocal differences occur among geographicall
Authors
Morton L Isler, Terry Chesser, Mark B Robbins, Andres M Cuervo, C Daniel Cadena, Peter A. Hosner

Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes

The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for 80 indivi
Authors
Terry Chesser, Morton L Isler, Andres M Cuervo, C Daniel Cadena, Spencer C Galen, Laura M. Bergner, Robert C. Fleischer, Gustavo A Bravo, Daniel F Lane, Peter A. Hosner

Anticipating future learning affects current control decisions: A comparison between passive and active adaptive management in an epidemiological setting

Infectious disease epidemics present a difficult task for policymakers, requiring the implementation of control strategies under significant time constraints and uncertainty. Mathematical models can be used to predict the outcome of control interventions, providing useful information to policymakers in the event of such an epidemic. However, these models suffer in the early stages of an outbreak f
Authors
Benjamin D Atkins, Chris P. Jewell, Michael C. Runge, Matthew J. Ferrari, Katriona Shea, William J. M. Probert, Michael J. Tildesley

An updated genetic marker for detection of Lake Sinai Virus and metagenetic applications

BackgroundLake Sinai Viruses (LSV) are common RNA viruses of honey bees (Apis mellifera) that frequently reach high abundance but are not linked to overt disease. LSVs are genetically heterogeneous and collectively widespread, but despite frequent detection in surveys, the ecological and geographic factors structuring their distribution in A. mellifera are not understood. Even less is known about
Authors
Deborah D. Iwanowicz, Judy Y. Wu-Smart, Tugce Olgun, Autumn H. Smart, Clint R.V. Otto, Dawn Lopez, Jay D. Evans, Robert S. Cornman

Aquatic invasive species in the Chesapeake Bay drainage—Research-based needs and priorities of U.S. Geological Survey partners and collaborators

Executive SummaryThe U.S. Geological Survey (USGS) is revising the Chesapeake Bay-based science plan to align it with recent U.S. Department of Interior and USGS science priorities that include, as stated in the plan, providing “an integrated understanding of the factors affecting fish habitat, fish health, and landscape conditions” in Chesapeake Bay and its watershed. A report of partner agencies
Authors
Christine L. Densmore