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Publications

Publications from USGS science centers throughout the Southeast Region.

Filter Total Items: 9967

Biology: Integrating core to essential variables (Bio-ICE) task team report for marine mammals

Marine mammals are wide-ranging, relatively long-lived organisms that play a crucial role in maintaining healthy ocean ecosystems. Often referred to as ecosystem engineers and sentinel species in marine ecosystems, these charismatic megafauna feed at a variety of trophic levels, affecting food web dynamics and cycling of chemicals and nutrients in the water column as well as in benthic habitats, b
Authors
Samantha E. Simmons, Abigail Benson, Matthew Biddle, Gabrielle Canonico, Maggie Chory, Kruti Desai, Masha Edmondson, Jason Gedamke, Stacie K. Hardy, Margaret Hunter, Anu Kumar, Laura Lorenzoni, Brian D. Melzian, Keith Mullin, Kim M. Parsons, James Price, Shannon Rankin, Patricia E. Rosel, Heather R. Spence, Sofie M. van Parijs, Michael J. Weise

Workshops report for mesophotic and deep benthic community fish, mobile invertebrates, sessile invertebrates and infauna

Two workshops with subject matter experts in the appropriate fields, were held in November and December 2021 to elicit guidance and feedback from the broader mesophotic and deep benthic scientific community. These workshops focused on best practices/approaches and identifying data gaps relative to habitat assessment and evaluation goals of the Mesophotic and Deep Benthic Community (MDBC) restorati
Authors
Rachel Bassett, Stacey L. Harter, Randy Clark, Ian Zink, Katherine Hornick, Jennifer Hartman, Hanna Bliska, Melissa Carle, Tracey Sutton, Amanda Demopoulos, Andy David, Kristopher Benson, Jill Bourque, Martha S. Nizinski, Nancy G. Prouty, Stephanie M. Sharuga, Alicia Caporaso, Jennifer Le, Jennifer Herting, Cheryl Morrison, Matthew Poti

Caretta caretta (Loggerhead Sea Turtle) nesting exchange

The Northwest Atlantic population of Loggerhead Sea Turtles (Caretta caretta) is one of the largest C. caretta populations in the world and is listed as threatened. This population was divided into five genetically distinct subpopulations, including the Northern Gulf of Mexico (NGoM) subpopulation (Shamblin et al. 2017 Mar. Bio. 164:138). Across the NGoM, the majority of C. caretta nesting occurs
Authors
Margaret Lamont, Jennifer S. Walker, Donna J. Shaver

Identifying turbulence features hindering swimming capabilities of grass carp larvae (Ctenopharyngodon idella) through submerged vegetation

Aquatic vegetation can provide habitat and refuge for a variety of species in streams. However, the flow features generated by submerged patches of vegetation can also pose a challenge for fish larvae. We conducted a series of experiments with live grass carp larvae (starting ∼50 h post hatch) in a laboratory racetrack flume, using a submerged array of rigid cylinders to mimic vegetation. We used
Authors
Rafael O. Tinoco, Andres F. Prada, Amy E. George, Benjamin H. Stahlschmidt, P. Ryan Jackson, Duane Chapman

The use of dye-tracing studies to delineate the recharge area for Manitou Cave in northwestern Alabama

In 2010 the U.S. Fish and Wildlife (USFWS) was petitioned to federally list the Manitou Cave Snail, (Antrorbis breweri ), a stygobiont endemic to Manitou Cave in northwestern Alabama. When an agency is tasked with determining whether to add a species to the Endangered Species List, one of the components examined is potential threats to the biota. Knowing the recharge area for a cave or spring is c
Authors
Benjamin Miller

Salinification of coastal wetlands and freshwater management to support resilience

Climates are rapidly changing in wetland ecosystems around the world and historical land-use change is not always given enough consideration in climate adaptation discussions. Historical changes to hydrology and other key environments can exacerbate vegetation stress; e.g., recent drought and flood episodes are likely more extreme because of climate change. The contributions of global and regional
Authors
Beth Middleton, Jere Boudell

VIMTS: Variational-based Imputation for Multi-modal Time Series

Multi-modal time series data in real applications often contain data of different dimensionalities, e.g., high-dimensional modality such as image data series, and low-dimensional univariate time series. Multi-modal time series data with missing high-dimensional modal values are ubiquitous in real-world classification and regression applications. To accurately predict the target labels, it is impor
Authors
Xiaowei Jia, Jennifer Burlingame Hoyle Fair, Benjamin Letcher

Food, beverage, and feedstock processing facility wastewater: A unique and underappreciated source of contaminants to U.S. streams

Process wastewaters from food, beverage, and feedstock facilities, although regulated, are an under-investigated environmental contaminant source. Food process wastewaters (FPWWs) from 23 facilities in 17 U.S. states were sampled and documented for a plethora of chemical and microbial contaminants. Of the 576 analyzed organics, 184 (32%) were detected at least once, with concentrations as large as
Authors
Laura E. Hubbard, Dana W. Kolpin, Carrie E Givens, Bradley D. Blackwell, Paul M. Bradley, James L. Gray, Rachael F. Lane, Jason R. Masoner, R. Blaine McCleskey, Kristin M. Romanok, Mark W. Sandstrom, Kelly L. Smalling, Daniel L. Villeneuve

Ambystoma opacum (marbled salamander). Atypical nest sites

The discovery of inconspicuous nests in secretive species not only expands knowledge but can reveal previously unknown behaviors and ecological consequences of those behaviors. Marbled salamanders exhibit the unusual strategy of laying their eggs terrestrially under cover. Here we report multiple occurrences of A. opacum nesting inside logs, which may be atypical for this species.
Authors
Joshua M Hall, Brad Glorioso, J Sean Doody

Coastal and marine science of the U.S. Geological Survey in St. Petersburg, Florida

The U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center (SPCMSC) in St. Petersburg, Florida, investigates processes that form and alter coastal and marine environments and the implications of these processes related to natural hazards, resource sustainability, and environmental change. The center is one of three facilities serving the mission of the USGS Coastal and Mari
Authors
Meaghan E. Emory

Emerging control strategies for integrated pest management of invasive carps

Invasive carps are ecologically and economically problematic fish species in many large river basins in the United States and pose a threat to aquatic ecosystems throughout much of North America. Four species of invasive carps: black carp (Mylopharyngodon piceus), grass carp (Ctenopharyngodon idella), silver carp (Hypophthalmichthys molitrix) and bighead carp (Hypophthalmichthys nobilis), are part
Authors
Aaron R. Cupp, Marybeth K. Brey, Robin Calfee, Duane Chapman, Richard A. Erickson, Jesse Robert Fischer, Andrea K. Fritts, Amy E. George, P. Ryan Jackson, Brent C. Knights, Gavin Nicholas Saari, Patrick Kočovský