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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41771

Elucidating controls on cyanobacteria bloom timing and intensity via Bayesian mechanistic modeling

The adverse impacts of harmful algal blooms (HABs) are increasing worldwide. Lake Erie is a North American Great Lake highly affected by cultural eutrophication and summer cyanobacterial HABs. While phosphorus loading is a known driver of bloom size, more nuanced yet crucial questions remain. For example, it is unclear what mechanisms are primarily responsible for initiating cyanobacterial dominan
Authors
Dario Del Giudice, Shiqi Fang, Donald Scavia, Timothy W. Davis, Mary Anne Evans, Daniel R Obenour

Investigation of the 2018 thick-billed murre (Uria lomvia) die-off on St. Lawrence Island rules out food shortage as the cause

Die-offs of seabirds in Alaska have occurred with increased frequency since 2015. In 2018, on St. Lawrence Island, seabirds were reported washing up dead on beaches starting in late May, peaking in June, and continuing until early August. The cause of death was documented to be starvation, leading to the conclusion that a severe food shortage was to blame. We use physiology and colony-based observ
Authors
Alexis Will, Jean-Baptiste Thiebot, Hon S. Ip, Panguk Shoogukwruk, Morgan Annogiyuk, Akinori Takahashi, Valerie I. Shearn-Bochsler, Mary-Lea Killian, Mia Kim Torchetti, Alexander Kitaysky

Negative effects of an allelopathic invader on AM fungal plant species drive community‐level responses

The mechanisms causing invasive species impact are rarely empirically tested, limiting our ability to understand and predict subsequent changes in invaded plant communities. Invader disruption of native mutualistic interactions is a mechanism expected to have negative effects on native plant species. Specifically, disruption of native plant‐fungal mutualisms may provide non‐mycorrhizal plant invad
Authors
Morgan Roche, Ian Pearse, Lalasia Bialic-Murphy, Stephanie N Kivlin, Helen Sofaer, Susan Kalisz

USGS enterprise tools for efficient and effective management of science data

The Science Data Management Branch (SDM) of the U.S. Geological Survey (USGS) provides data management expertise and leadership and develops guidance and tools to support the USGS in providing the nation with reliable scientific information on the basis of which to describe the Earth. The SDM suite of tools supports the USGS Data Management Lifecycle by facilitating quality assurance, description,
Authors
Vivian B. Hutchison, Amanda Liford, Ricardo McClees-Funinan, Lisa Zolly, Drew Ignizio, Madison Langseth, Brandon Serna, Elizabeth Sellers, Leslie Hsu, Tamar Norkin, Marcia McNiff, Grace C. Donovan

The pathogenesis of a North American H5N2 clade 2.3.4.4 group A highly pathogenic avian influenza virus in surf scoters (Melanitta perspicillata)

BackgroundAquatic waterfowl, particularly those in the order Anseriformes and Charadriiformes, are the ecological reservoir of avian influenza viruses (AIVs). Dabbling ducks play a recognized role in the maintenance and transmission of AIVs. Furthermore, the pathogenesis of highly pathogenic AIV (HPAIV) in dabbling ducks is well characterized. In contrast, the role of diving ducks in HPAIV mainten
Authors
Jasmine M. Luczo, Diann Prosser, Mary J. Pantin-Jackwood, Alicia Berlin, Erica Spackman

The effects of management practices on grassland birds—Prairie Falcon (Falco mexicanus)

Keys to Prairie Falcon (Falco mexicanus) management include maintaining cliffs with suitable recesses for use as nest sites (that is, the substrate that supports the nest or the specific location of the nest on the landscape), protecting nest sites from human disturbance by designating buffer zones, and maintaining open landscapes and habitats that support populations of ground squirrels (Urocitel
Authors
John P. DeLong, Karen Steenhof

How parasite exposure and time interact to determine Australapatemon burti (Trematoda: Digenea) infections in second intermediate hosts (Erpobdella microstoma) (Hirudinea: Erpodellidae)

Australapatemon spp. are cosmopolitan trematodes that infect freshwater snails, aquatic leeches, and birds. Despite their broad geographic distribution, relatively little is known about interactions between Australapatemon spp. and their leech hosts, particularly under experimental conditions and in natural settings. We used experimental exposures to determine how Australapatemon burti cercariae d
Authors
Dana Marie Calhoun, Evan Esfahani, Sean A. Locke, William E. Moser, Pieter T. J. Johnson

Multidecadal comparison of Red-footed Booby Sula sula diet at Ulupa'u Crater, O'ahu, Hawai'i

We describe the diet of Red-footed Boobies Sula sula nesting at Ulupaʻu Crater, Oʻahu, Hawaiʻi based on 106 regurgitations collected during 2014 and 2015. We also compare our results to a diet study at this colony five decades earlier. Both studies indicate that flying squid (Ommastrephidae) and flyingfish (Exocoetidae) are important prey for this population while provisioning chicks. In particula
Authors
Sarah E. Donahue, Josh Adams, K David Hyrenbach

Linking plant and animal functional diversity with an experimental community restoration in a Hawaiian lowland wet forest

Testing how plant restoration influences animal taxonomic and functional diversity can shift restoration projects beyond mainly plant community considerations. We incorporated multi-trophic interactions into restoration by describing an ongoing functional trait-based restoration experiment in Hawaiian lowland tropical wet forest (Liko Nā Pilina Experiment), where litter arthropods are examined fro
Authors
Rebecca Ostertag, Esther Sebastián-González, Robert W. Peck, Trebor Hall, Jihoo Kim, Nicole DiManno, Donald Rayonne, Susan Cordell, Paul C. Banko, Amanda Uowolo

Occurrence and spatiotemporal dynamics of pharmaceuticals in a temperate-region wastewater effluent-dominated stream: Variable inputs and differential attenuation yield evolving complex exposure mixtures

Effluent-dominated streams are becoming increasingly common in temperate regions and generate complex pharmaceutical mixture exposure conditions that may impact aquatic organisms via drug–drug interactions. Here, we quantified spatiotemporal pharmaceutical exposure concentrations and composition mixture dynamics during baseflow conditions at four sites in a temperate-region effluent-dominated stre
Authors
Hui Zhi, Dana W. Kolpin, R. D. Klaper, Luke R. Iwanowicz, Shannon M. Meppelink, Gregory H. LeFevre

Modeling occupancy of rare stream fish species in the upper Cumberland and Kentucky River Basins

Biological conservation often requires an understanding of how environmental conditions affect species occurrence and detection probabilities. We used a hierarchical framework to evaluate these effects for several Appalachian stream fish species of conservation concern: Chrosomus cumberlandensis (BSD; blackside dace), Etheostoma sagitta (CAD; Cumberland arrow darter), and Etheostoma spilotum (KAD;
Authors
Nathaniel P. Hitt, Karli M. Rogers, Karmann Kessler, Hannah E. Macmillan

Seasonality of acarological risk of exposure to Borrelia miyamotoi from questing life stages of Ixodes scapularis collected from Wisconsin and Massachusetts, USA

Measures of acarological risk of exposure to Ixodes scapularis-borne disease agents typically focus on nymphs; however, the relapsing fever group spirochete, Borrelia miyamotoi can be transmitted transovarially, and I. scapularis larvae are capable of transmitting B. miyamotoi to their hosts. To quantify the larval contribution to acarological risk, relative to nymphs and adults, we collected ques
Authors
Seungeun Han, Graham J. Hickling, Nicholas H. Ogden, Howard S. Ginsberg, Vishvapali Kobbekaduwa, Eric L. Rulison, Lorenza Beati, Jean I. Tsao