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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41771

Using density surface models to estimate spatio-temporal changes in population densities and trend

Precise measures of population abundance and trend are needed for species conservation; these are most difficult to obtain for rare and rapidly changing populations. We compare uncertainty in densities estimated from spatio–temporal models with that from standard design‐based methods. Spatio–temporal models allow us to target priority areas where, and at times when, a population may most benefit.
Authors
Richard J. Camp, David L Miller, Len Thomas, Steve T. Buckland, Steve J. Kendall

The effects of tissue fixation on sequencing and transcript abundance of nucleic acids from microdissected liver samples of smallmouth bass (Micropterus dolomieu)

There is an increasing emphasis on effects-based monitoring to document responses associated with exposure to complex mixtures of chemicals, climate change, pathogens, parasites and other environmental stressors in fish populations. For decades aquatic monitoring programs have included the collection of tissues preserved for microscopic pathology. Consequently, formalin-fixed, paraffin-embedded
Authors
Heather L. Walsh, Vicki S. Blazer, Adam Sperry

Management of remnant tallgrass prairie by grazing or fire: Effects on plant communities and soil properties

Tallgrass prairie is a disturbance‐dependent ecosystem that has suffered steep declines in the midwestern United States. The necessity of disturbance, typically fire or grazing, presents challenges to managers who must apply them on increasingly small and fragmented parcels. The goal of this study was to compare effects of management using cattle grazing or fire on vegetation and soil characterist
Authors
Diane L. Larson, Daniel L. Hernández, Jennifer L. Larson, Julia B. Leone, Nora P. Pennarola

Disentangling the effects of multiple fires on spatially interspersed sagebrush (Artemisia spp.) communities

QuestionsRelative to a landscape with a mosaic of two sagebrush community types and increasing fire frequency, we asked: (a) do vegetation characteristics vary significantly with number of times burned for each sagebrush community; (b) how do vegetation responses to different fire frequencies compare between the two sagebrush communities?LocationColumbia Plateau Ecoregion, Washington, USA.MethodsW
Authors
Douglas J. Shinneman, Susan McIlroy, Marie-Anne de Graaff

Boreal blazes: Biomass burning and vegetation types archived in the Juneau Icefield

The past decade includes some of the most extensive boreal forest fires in the historical record. Warming temperatures, changing precipitation patterns, the desiccation of thick organic soil layers, and increased ignition from lightning all contribute to a combustive combination. Smoke aerosols travel thousands of kilometers, before blanketing the surfaces on which they fall, such as the Juneau Ic
Authors
Natalie Kehrwald, Jeramy Roland Jasmann, Melissa E. Dunham, David G. Ferris, Erich C. Osterburg, Joshua Kennedy, Jeremy C. Havens, Larry B. Barber, Sarah K. Fortner

Kelp forest monitoring at Naval Base Ventura County, San Nicolas Island, California: Fall 2018 and Spring 2019, fifth annual report

IntroductionKelp forests and rocky reefs are among the most recognized marine ecosystems and provide the primary habitat for several species of fishes, invertebrates, and algal assemblages (Stephens and others, 2006). In addition, kelp forests have been shown to be important carbon dioxide sinks (Wilmers and others, 2012) and are an important source of nearshore marine primary production (Duggins
Authors
Michael C. Kenner, Joseph A. Tomoleoni

Larval Coregonus spp. diets and zooplankton community patterns in the Apostle Islands, Lake Superior

With the exception of lake whitefish (Coregonus clupeaformis), relatively little is known about the early life history of larval coregonines in the Laurentian Great Lakes. For example, our knowledge of the feeding ecology of larval coregonines (excluding lake whitefish) is based on only 900 stomachs reported in the literature. Here, we describe the diets and demographics of larval coregonines from
Authors
Verena S. Lucke, Taylor R. Stewart, Mark Vinson, Jay D. Glase, Jason D. Stockwell

Modelling marsh-forest boundary transgression in response to storms and sea-level rise

The lateral extent and vertical stability of salt marshes experiencing rising sea levels depend on interacting drivers and feedbacks with potential for non‐linear behaviors. A two‐dimensional transect model was developed to examine changes in marsh and upland forest lateral extent and to explore controls on marsh inland transgression. Model behavior demonstrates limited and abrupt forest retreat w
Authors
Joel A. Carr, Glenn R. Guntenspergen, Matthew Kirwan

Repurposing a hindcast simulation of the 1926 Great Miami Hurricane, south Florida

Hydrodynamic model hindcasts of the surface water and groundwater of the Everglades and the greater Miami, Florida, area were used to simulate hydrology using estimated storm surge height, wind field, and rainfall for the Great Miami Hurricane (GMH), which struck on September 18, 1926. Ranked estimates of losses from hurricanes in inflation-adjusted dollars indicate that the GMH was one of the mos
Authors
M. Dennis Krohn, Eric D. Swain, Catherine A. Langtimm, Jayantha Obeysekera

Distribution of deep-water scleractinian and stylasterid corals across abiotic environmental gradients on three seamounts in the Anegada Passage

In the Caribbean Basin the distribution and diversity patterns of deep-sea scleractinian corals and stylasterid hydrocorals are poorly known compared to their shallow-water relatives. In this study, we examined species distribution and community assembly patterns of scleractinian and stylasterid corals on three high-profile seamounts within the Anegada Passage, a deep-water throughway linking the
Authors
Steven R. Auscavitch, Jay J. Lunden, Alexandria Barkman, Andrea Quattrini, Amanda Demopoulos, Erik E. Cordes

The importance of the Northeastern Gulf of Mexico to foraging loggerhead sea turtles

Identification of high-use foraging sites where imperiled sea turtles are resident remains a globally-recognized conservation priority. In the biodiverse Gulf of Mexico (GoM), recent telemetry studies highlighted post-nesting foraging sites for federally threatened loggerhead turtles (Caretta caretta). Our aim here was to discern loggerhead use of additional northern GoM regions that may serve as
Authors
Kristen M. Hart, Margaret M. Lamont, Autumn Iverson, Brian Smith

Regime change in a large-floodplain river ecosystem: Patterns in body-size and functional biomass indicate a shift in fish communities

Changes in species dominance may drive regime shifts because dominant biotic feedbacks reflect functional traits of a community. Changes in species dominance has been documented by a 25-year fish community dataset encompassing six reaches of the Upper Mississippi and Illinois Rivers. Specifically, common carp (Cyprinus carpio) abundance has declined across all reaches, whereas silver carp (Hypopht
Authors
Kristen L. Bouska