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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41778

Eradication of peste des petits ruminants and the wildlife-livestock interface

Growing evidence suggests that multiple wildlife species can be infected with peste des petits ruminants virus (PPRV), with important consequences for the potential maintenance of PPRV in communities of susceptible hosts, and the threat that PPRV may pose to the conservation of wildlife populations and resilience of ecosystems. Significant knowledge gaps in the epidemiology of PPRV across the rumi
Authors
Amanda E. Fine, Mathieu Pruvot, Camila Benfield, Alexandre Caron, Giovanni Cattoli, Philippe Chardonnet, Maurizio Dioli, Thomas Dulu, Martin Gilbert, Richard Kock, Juan Lubroth, Jeffery Mariner, Stephane Ostrowski, Satya Parida, Sasan Fereidouni, Enkhtuvshin Shiilegdamba, Jonathan M. Sleeman, Claudia Schultz, Jean-Jacques Soula, Yves van der Stede, Berhe G. Tekola, Chris Walzer, Steffen Zuther, Feliz Njeumi

Small-scale water deficits after wildfires create long-lasting ecological impacts

Ecological droughts are deficits in soil–water availability that induce threshold-like ecosystem responses, such as causing altered or degraded plant-community conditions, which can be exceedingly difficult to reverse. However, 'ecological drought' can be difficult to define, let alone to quantify, especially at spatial and temporal scales relevant to land managers. This is despite a growing need
Authors
Rory O'Connor, Matthew Germino, David M Barnard, Caitlin M. Andrews, John B. Bradford, David Pilliod, Robert Arkle, Robert K Shriver

Abundance and productivity of marbled murrelets (Brachyramphus marmoratus) off central California during the 2019 breeding season

Marbled murrelets (Brachyramphus marmoratus) have been listed as “endangered” by the State of California and “threatened” by the U.S. Fish and Wildlife Service since 1992 in California, Oregon, and Washington. Information regarding marbled murrelet abundance, distribution, population trends, and habitat associations is critical for risk assessment, effective management, evaluation of conservation
Authors
Jonathan J. Felis, Emily C. Kelsey, Josh Adams, Cheryl Horton, Laura (Laney) White

Global plant trait relationships extend to the climatic extremes of the tundra biome

The majority of variation in six traits critical to the growth, survival and reproduction of global plant species is thought to be organised along just two dimensions, corresponding to strategies of plant size and resource acquisition. However, it is unknown whether global plant trait relationships extend to climatic extremes, and if these interspecific relationships are confounded by trait variat
Authors
H. J. D. Thomas, A. D. Bjorkman, I. H. Myers-Smith, S.C. Elmendorf, Jens Kattge, Sandra Diaz, Mark Vellend, D. Blok, J. H. C. Cornelissen, B. C. Forbes, G. H. R. Henry, R.D. Hollister, S. Normand, Janet S. Prevéy, C. Rixen, G. Schaepman-Strub, M. Wilmking, S. Wipf, W.K. Cornwell, P. S. A. Beck, D. Georges, S.J. Goetz, K. C. Guay, Nadja Ruger, N. A. Soudzilovskaia, Marko J. Spasojevic, Juha Alatalo, H. D. Alexander, A. Anadon-Rosell, S. Angers-Blondin, M. teBeest, L. T. Berner, R. G. Bjork, A. Buchwal, A. Buras, M. Carbognani, K. S. Christie, L. S. Collier, E. J. Cooper, B. Elberling, A. Eskelinen, E. R. Frei, O. Grau, P. Grogan, M. Hallinger, M. M. P. D. Heijmans, L. Hermanutz, J. M. G. Hudson, J.F. Johnstone, K. Hulber, M. Iturrate-Garcia, Colleen M. Iversen, F. Jaroszynska, E, Kaarlejarvi, A. Kulonen, L. J. Lamarque, T. C. Lantz, E. Levesque, C.E. Little, Anders Michelsen, A. Milbau, Jacob Nabe-Nielsen, S. S. Nielsen, J. M. Ninot, S. F. Oberbauer, J. Olofsson, V. G. Onipchenko, A. Petraglia, S. B. Rumpf, R. Shetti, J. D. M. Speed, K.N. Suding, K.D. Tape, M. Tomaselli, A. J. Trant, U. A. Treier, M. Tremblay, S. E. Venn, T. Vowles, S. Weijers, P. A. Wookey, T. J. Zamin, M. Bahn, B. Blonder, P. M. van Bodegom, B. Bond-Lamberty, G. Campetella, B. E. L. Cerabolini, F. S. Chapin, Joseph M. Craine, M. Dainese, W. A. Green, S. Jansen, M. Kleyer, P. Manning, U. Niinemets, Y. Onoda, W. A. Ozinga, J. Penuelas, P. Poschlod, Peter B. Reich, B. Sandel, B. S. Schamp, S. N. Sheremetiev, F. T. de Vries

Structural equation modeling

This chapter introduces background and historical information on how structural equation modeling (SEM) came to be developed. Then, the main differences between SEM and earlier multivariate methods are explained. The chapter describes three main applications of SEM: path analysis, factor analysis, and hybrid models. Some computer programs are recommended for these applications. The step-by-step se
Authors
Matt Miller, Ivana Tasic, Torrey Lyons, Reid Ewing, James B. Grace

Intrinsic prey preference and selection of the giant gartersnake: A threatened predator in a nonnative prey-dominated community

The introduction of exotic species into an environment can introduce great change in the trophic dynamics of native species. This is of even greater concern if the native species is of conservation concern. The giant gartersnake, Thamnophis gigas, an endemic predator of the Central Valley of California and a species of conservation concern at the state and federal levels, has declined as a result
Authors
Julia Ersan, Brian J. Halstead, Erica L Wildy, Michael L. Casazza, Glenn D. Wylie

Louisiana Adaptive Management Status and Improvement Report: Vision and Recommendations

As part of the process to increase implementation of adaptive management for ecosystem-based coastal restoration within Louisiana, we aim for this report to be broadly applicable across planning processes as well as funding and implementing entities. It compiles technical knowledge and guidance summarized as key findings through the text which lead to eight priority recommendations to improve appl
Authors
Bill Boshart, Morgan Crutcher, Angelina Freeman, Edward Haywood, Syed M. Khalil, Summer Langlois, Darin L. Lee, David Lindquist, Tommy E. McGinnis, James Pahl, Carol Parsons-Richards, Erin Plitsch, Rick Raynie, Robert Routon, Leigh Anne Sharp, John Troutman, Chuck Villarrubia, Todd Folse, Alyson Graugnard, Anne Hawes, Russ Joffrion, Wes Leblanc, Brian Lezina, Jim Pahl, Jody White, Craig Conzelmann, Ann Hijuelos, Sarai Piazza, Kathryn A. Spear, Gregory D. Steyer, Nanciann Regalado, John M. Tirpak, Courtney Schupp, Melissa Carle, Jaclyn Daly, Nicolas Eckhardt, Christy Fellas, Erin M. Fougeres, Stephen Heverly, Stacey Horstman, Jason Kroll, Mel Landry, Barbara A. Schroeder, Eric Weissberger, Sara Wissman, Treda Grayson, Patricia Taylor, Danny Wiegand, Mark Defley, Paulina Kolic, Harris Bienn, Tim J. B. Carruthers, Alyssa Dausman, Alaina Grace, Scott Hemmerling, Andrea Jerabek, Eric White, Ryan Clark, Coleen McHugh, Leland C Moss, Cyndhia Ramatchandirane, Amy Wold

Antibiotic resistance in marine microbial communities proximal to a Florida sewage outfall system

Water samples were collected at several wastewater treatment plants in southeast Florida, and water and sediment samples were collected along and around one outfall pipe, as well as along several transects extending both north and south of the respective outfall outlet. Two sets of samples were collected to address potential seasonal differences, including 38 in the wet season (June 2018) and 42 i
Authors
Dale W. Griffin, Kenneth Banks, Kurtis Gregg, Sarah Shedler, Brian Walker

Uptake and toxicity of clothianidin to monarch butterflies from milkweed consumption

Recent concern for the adverse effects from neonicotinoid insecticides has centered on risk for insect pollinators in general and bees specifically. However, natural resource managers are also concerned about the risk of neonicotinoids to conservation efforts for the monarch butterfly (Danaus plexippus) and need additional data to help estimate risk for wild monarch butterflies exposed to those in
Authors
Timothy A. Bargar, Michelle L. Hladik, Jaret C. Daniels

Climate change effects on biodiversity, ecosystems, ecosystem services, and natural resource management in the United States

Climate change is a pervasive and growing global threat to biodiversity and ecosystems. Here, we present the most up-to-date assessment of climate change impacts on biodiversity, ecosystems, and ecosystem services in the U.S. and implications for natural resource management. We draw from the 4th National Climate Assessment to summarize observed and projected changes to ecosystems and biodiversity,
Authors
Sarah R. Weiskopf, Madeleine A. Rubenstein, Lisa Crozier, Sarah Gaichas, Roger Griffis, Jessica E. Halofsky, Kimberly J. W. Hyde, Toni Lyn Morelli, Jeffrey T. Morisette, Roldan C. Muñoz, Andrew J. Pershing, David L. Peterson, Rajendra Poudel, Michelle D. Staudinger, Ariana E. Sutton-Grier, Laura Thompson, James Vose, Jake Weltzin, Kyle Powys Whyte

Gulls as sources of environmental contamination by colistin-resistant bacteria

In 2015, the mcr-1 gene was discovered in Escherichia coli in domestic swine in China that conferred resistance to colistin, an antibiotic of last resort used in treating multi-drug resistant bacterial infections in humans. Since then, mcr-1 was found in other human and animal populations, including wild gulls. Because gulls could disseminate the mcr-1 gene, we conducted an experiment to assess wh
Authors
Alan B. Franklin, Andrew M. Ramey, Kevin T Bentler, Nicole L Barret, Loredana M McCurdy, Christina Ahlstrom, Jonas Bonnedahl, Susan A. Shriner, Jeffrey C Chandler

Soil water availability shapes species richness in mid-latitude shrub steppe plant communities

QuestionsEcological communities are controlled by multiple, interacting abiotic and biotic factors that influence the distribution, abundance, and diversity of species. These processes jointly determine resource availability, resource competition, and ultimately species richness. For many terrestrial ecosystems in dryland climates, soil water availability is the most frequent limiting resource for
Authors
Samuel E. Jordan, Kyle A. Palmquist, John B. Bradford, William K. Lauenroth