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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41778

Understanding the effect of fire on vegetation composition and gross primary production in a semi-arid shrubland ecosystem using the Ecosystem Demography (EDv2.2) model

Wildfires in sagebrush (Artemisia spp.) dominated semi-arid ecosystems in the western United States have increased dramatically in frequency and severity in the last few decades. Severe wildfires often lead to the loss of native sagebrush communities and change the biogeochemical conditions which make it difficult for sagebrush to regenerate. Invasion of cheat- grass (Bromus tectorum) accentuates
Authors
Karun Pandit, Hamid Dashti, Andrew A. Hudak, Nancy F. Glenn, Alejandro N Flores, Douglas J. Shinneman

The Modern Geological Survey; a model for research, innovation, synthjesis: A USGS perspective

Geological Surveys have long filled the role of providing Earth system science data and knowledge. These functions are increasingly complicated by accelerating environmental and societal change. Here we describe the USGS response to these evolving conditions. Underpinning the USGS approach is the recognition that many of the issues facing the U.S. and the world involve the interaction among geol
Authors
Suzette Kimball, Martin B. Goldhaber, Jill S. Baron, Victor F. Labson

Spatiotemporal patterns in trophic niche overlap among five salmonines in Lake Michigan, USA

Native lake trout and introduced Chinook salmon, coho salmon, steelhead, and brown trout are major predators in Lake Michigan’s complex ecosystem and collectively support a valuable recreational fishery, but declines in their primary prey, alewife, have raised ecological and management concerns about competition and prey allocation. We applied niche overlap analysis to evaluate competition among s
Authors
Matthew S. Kornis, David B. Bunnell, Heidi K. Swanson, Charles R. Bronte

Modeling soil porewater salinity response to drought in tidal freshwater forested wetlands

There is a growing concern about the adverse effects of saltwater intrusion via tidal rivers, streams and creeks into tidal freshwater forested wetlands (TFFW) due to sea‐level rise (SLR) and intense and extended drought events. However, the magnitude and duration of porewater salinity in exceedance of plant salinity stress threshold (2 practical salinity units, psu) and the controlling factors re
Authors
Hongqing Wang, Ken W. Krauss, Gregory Noe, Camille L. Stagg, Christopher M. Swarzenski, Jamie A. Duberstein, William H. Conner, Donald L. DeAngelis

Multiple elements of soil biodiversity drive ecosystem functions across biomes

The role of soil biodiversity in regulating multiple ecosystem functions is poorly understood, limiting our ability to predict how soil biodiversity loss might affect human wellbeing and ecosystem sustainability. Here, combining a global observational study with an experimental microcosm study, we provide evidence that soil biodiversity (bacteria, fungi, protists and invertebrates) is significantl
Authors
Manuel Delgado-Baquerizo, Peter B. Reich, Mandar Trivedi, David J. Eldridge, Sebastian Abades, Fernando D. Alfaro, Felipe Bastida, Asmeret A. Berhe, Nick A. Cutler, Antonio Gallardo, Laura Garcia-Velazquez, Stephen C. Hart, Patrick E. Hayes, Ji-Zheng He, Zeng-Yei Hseu, Hang-Wei Hu, Martin Kirchmair, Sigrid Neuhauser, Cecilia A. Pérez, Sasha C. Reed, Fernanda Santos, Benjamin W. Sullivan, Pankaj Trivedi, Jun-Tao Wang, Luis Weber-Grullon, Mark A. Williams, Brajesh K. Singh

Osmoregulatory role of the intestine in the sea lamprey (Petromyzon marinus)

Lampreys are the most basal vertebrates with an osmoregulatory strategy. Previous research has established that salinity tolerance of sea lamprey increases dramatically during metamorphosis, but underlying changes in the gut have not been examined. In the present work, we examined changes in intestinal function during metamorphosis and seawater exposure of sea lamprey (Petromyzon marinus). Ful
Authors
Andre Barany, Ciaran A Shaughnessy, Juan Fuentes, Juan M Mancera, Stephen D. McCormick

Characterization of pallid sturgeon (Scaphirhynchus albus) spawning habitat in the Lower Missouri River

Acipenseriformes (sturgeons and paddlefish) globally have declined throughout their range due to river fragmentation, habitat loss, overfishing, and degradation of water quality. In North America, pallid sturgeon (Scaphirhynchus albus) populations have experienced poor to no recruitment, or substantial levels of hybridization with the closely related shovelnose sturgeon (S. platorynchus). The Lowe
Authors
Caroline M. Elliott, Aaron J. Delonay, Kimberly Chojnacki, Robert B. Jacobson

Divergent genes encoding the putative receptors for growth hormone and prolactin in sea lamprey display distinct patterns of expression

Growth hormone receptor (GHR) and prolactin receptor (PRLR) in jawed vertebrates were thought to arise after the divergence of gnathostomes from a basal vertebrate. In this study we have identified two genes encoding putative GHR and PRLR in sea lamprey (Petromyzon marinus) and Arctic lamprey (Lethenteron camtschaticum), extant members of one of the oldest vertebrate groups, agnathans. Phylogeneti
Authors
Ningping Gong, Diogo Ferreira-Martins, Stephen D. McCormick, Mark Sheridan

Conservation genomics in a changing arctic

Although logistically challenging to study, the Arctic is a bellwether for global change and is becoming a model for questions pertinent to the persistence of biodiversity. Disruption of Arctic ecosystems is accelerating, with impacts ranging from mixing of biotic communities to individual behavioral responses. Understanding these changes is crucial for conservation and sustainable economic develo
Authors
Jocelyn P. Colella, Sandra L. Talbot, Christian Brochmann, Eric B. Taylor, Eric P. Hoberg, Joseph A. Cook

Final project memorandum: Identifying conservation objectives for the Gulf Coast habitats of the black skimmer and gull-billed tern

Many shorebirds and nearshore waterbirds are of conservation concern across the Gulf of Mexico due to stressors such as human disturbance, predation, and habitat loss and degradation. Conservation and protection of these birds is important for the functioning of healthy ecosystems and for maintaining biodiversity in North America. Consequently, resource managers along the Gulf need decision-aiding
Authors
James P. Cronin

Pacific Continental Shelf Environmental Assessment (PaCSEA): Characterization of Seasonal Water Masses within the Northern California Current System Using Airborne Remote Sensing off Northern California, Oregon, and Washington, 2011–2012

Here, we use ocean color measurements (Figure 1) and sea surface temperature (SST) data collected using sensors mounted on low-flying aircraft to characterize NCCS water masses and identify patterns among seasons and between years. To accomplish this, we applied k-means clustering to measured and derived ecologically-relevant physical and bio-optical variables (SST, Chla, absorbance by colored dis
Authors
J A Schulien, Josh Adams, Jonathan J. Felis

Acute toxicity and clotting times of anticoagulant rodenticides to red-toothed (Odonus niger) and black (Melichthys niger) triggerfish, fathead minnow (Pimephales promelas), and largemouth bass (Micropterus salmoides)

Anticoagulant rodenticides (ARs) areused in rateradication efforts on island wildlife refuges. ARbait pellets can get into coralreefareasduring broadcasting and leadto exposure ofnon-target organisms, such as marine fishes. The objective of this study was to determine the sensitivity of representative saltwater fishes, Red-toothed triggerfish (Odonus niger) and Black triggerfish (Melichthys niger), and
Authors
Rachelle Riegerix, Mike Tanner, Robert W. Gale, Donald E. Tillitt