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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41758

Pathology and infectious agents of unionid mussels: A primer for pathologists in disease surveillance and investigation of mortality events

Freshwater mussels are one of the most imperiled groups of organisms in the world, and more than 30 species have gone extinct in the last century. While habitat alteration and destruction have contributed to the declines, the role of disease in mortality events is unclear. In an effort to involve veterinary pathologists in disease surveillance and the investigation of freshwater mussel mortality e
Authors
Susan Knowles, Michelle Dennis, Andrew McElwain, Eric Leis, Jordan C. Richard

A comprehensive plan for in-water sea turtle data collection in the US Gulf of Mexico

The Deepwater Horizon Open Ocean Trustee Implementation Group (OO TIG) released a Final Open Ocean Restoration Plan 2 in 2019, which included a project titled Developing a Gulf-wide Comprehensive Plan for In-water Sea Turtle Data Collection. This document, A Comprehensive Plan for In-water Sea Turtle Data Collection in the US Gulf of Mexico (Plan), is the culmination of that OO TIG project. This P
Authors
Kristen Hart, Pamela T. Plotkin, Christopher Sasso, Blair E. Witherington

Implications of tree expansion in shrubland ecosystems for two generalist avian predators

Shrublands globally have undergone structural changes due to plant invasions, including the expansion of native trees. Removal of native conifer trees, especially juniper (Juniperus spp.), is occurring across the Great Basin of the western U.S. to support declining sagebrush (Artemisia spp.) habitats and associated wildlife species, such as greater sage-grouse (Centrocercus urophasianus). One just
Authors
Aaron C. Young, Todd E. Katzner, Douglas J. Shinneman, Tracey N. Johnson

Dynamic spatiotemporal modeling of a habitat-defining plant species to support wildlife management at regional scales

Sagebrush (Artemisia spp.) ecosystems provide critical habitat for the Greater sage-grouse (Centrocercus urophasianus), a species of conservation concern. Thus, future loss of sagebrush habitat because of land use change and global climate change is of concern. Here, we use a dynamic additive spatiotemporal model to estimate the effects of climate on sagebrush cover dynamics at 32 sage-grouse mana
Authors
Andrew T. Tredennick, Adrian P. Monroe, Thomas J. Prebyl, John Lombardi, Cameron L. Aldridge

Modeling the spatial distribution of carcasses of eagles killed by wind turbines

Currently, the US Fish and Wildlife Service makes eagle permitting and management decisions nationwide based on a limited understanding of the impacts of wind power generation on eagles, and the factors that influence risk at a given facility. Accurate estimates of eagle mortality at wind power facilities form the basis for comparing the magnitudes of mortality rates in different areas and for mea
Authors
Manuela Huso, Daniel Dalthorp, Jeffrey Michael Mintz, Torgeir Nygård, Roel May

Citizen science can complement professional invasive plant surveys and improve estimates of suitable habitat

AimCitizen science is a cost-effective potential source of invasive species occurrence data. However, data quality issues due to unstructured sampling approaches may discourage the use of these observations by science and conservation professionals. This study explored the utility of low-structure iNaturalist citizen science data in invasive plant monitoring. We first examined the prevalence of in
Authors
Monica Dimson, Lucas Fortini, Morgan W Tingley, Thomas W Gillespie

Actualizing Indigenous Knowledge in tribal wildlife management: Basic preconditions

Indigenous Knowledge (IK) is increasingly involved in the contemporary management of natural resources. Tribal wildlife management programs in the United States may be uniquely positioned to effectively and ethically integrate their IK. While a narrow focus on the body of IK and a particular management activity may suffice for project-level integration efforts, herein we consider how IK integratio
Authors
Anthony Warren Ciocco, Stefan Tangen, Chad Smith

Using multiscale environmental and spatial analyses to understand natural and anthropogenic influence on fish communities in four Canadian rivers

Science-based conservation of riverine fishes can be best targeted with specific information about spatial-ecological controls on the community, including anthropogenic stressors. Because anthropogenic stressors can originate at multiple spatial scales, we investigated the influence of natural and anthropogenic variables summarized within the reach, valley, and catchment on fish community composit
Authors
Beth L. Sparks-Jackson, Peter C. Esselman, Christopher C. Wilson, Leon M. Carl

Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: Inferences from a soap film smoother

Birds are often obligate to specific habitats which can result in study areas with complex boundaries due to sudden changes in vegetation or other features. This can result in study areas with concave arcs or that include holes of unsuitable habitat such as lakes or agricultural fields. Spatial models used to produce species’ distribution and density estimates need to respect such boundaries to ma
Authors
Richard J. Camp, David L Miller, Steve T. Buckland, Steve J. Kendall

Long-term effects of timber harvest on ephemeral pool and occupancy of Spotted Salamanders (Ambystoma maculatum) and Wood Frogs (Lithobates sylvaticus)

The effects of timber harvest on amphibians can be complex and persist for years postharvest, but overall they are poorly understood. We examined how timber harvest has impacted two pool-breeding species, Spotted Salamander (Ambystoma maculatum) and Wood Frog (Lithobates sylvaticus), across the Canaan Valley National Wildlife Refuge, West Virginia, USA. We surveyed Spotted Salamanders and Wood Fro
Authors
Amber NM Wiewel, Adrianne Brand, Evan H. Campbell Grant

Condition and coloration of lingual lures of Alligator Snapping Turtles

The lingual lures of Macrochelys (alligator snapping turtles) are believed to be the only prey-capturing lures within the mouths of modern reptiles. To date, no formal assessment of lure condition in Macrochelys has been published, and few researchers record lure data. Herein, we report damaged or missing lures from 25 Macrochelys temminckii (Alligator Snapping Turtle; 7 adults, 18 juveniles) from
Authors
Brad Glorioso, John L. Carr, Carl J. Franklin, Mandi Gordon, Aaron C. Johnson, Ethan J. Kessler, Eric Munscher, Luke Pearson, Viviana Ricardez, Arron Tuggle

Evaluation of threatened, endangered, and rare fish species and communities of the St. Lawrence River and its tributaries in the United States

Biodiversity is responsible for important ecological processes like productivity and ecosystem stability, and rare species are a major component of biodiversity. Rarity increases a species' vulnerability to disturbances and also makes them difficult to study. Globally, species of freshwater systems are some of the most threatened, and evaluation of rare freshwater species and their habitats is nee
Authors
James E. McKenna, Anthony David