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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41778

Synthesis of habitat availability and carrying capacity research to support water management decisions and enhance conditions for Pacific salmon in the Willamette River, Oregon

Flow management is complex in the Willamette River Basin where the U.S. Army Corps of Engineers owns and operates a system of 13 dams and reservoirs (hereinafter Willamette Project), which are spread throughout three large tributaries including the Middle Fork Willamette, McKenzie, and Santiam Rivers. The primary purpose of the Willamette Project is flood-risk management, which provides critical p
Authors
Tobias J. Kock, Russell W. Perry, Gabriel S. Hansen, James White, Laurel E. Stratton Garvin, J. Rose Wallick

Genetic variation in sea otters (Enhydra lutris) from the North Pacific with relevance to the threatened Southwest Alaska Distinct Population Segment

For the sea otter (Enhydra lutris), genetic population structure is an area of research that has not received significant attention, especially in Southwest Alaska where that distinct population segment has been listed as threatened since 2005 pursuant to the U.S. Endangered Species Act. In this study, 501 samples from 14 locations from Prince William Sound, Alaska to the Commander Islands in Russ
Authors
Blair G. Flannery, Ora L. Russ, Michelle St. Martin, William S. Beatty, Kristen Worman, Joel Garlich-Miller, Verena A. Gill, Patrick R. Lemons, Daniel Monson, Kimberly A. Kloecker, Daniel Esler, John Wenburg

Capture vulnerability of sea turtles on recreational fishing piers

Capture vulnerability of commercial and recreational fishes has been associated with behavioral, morphological, and life-history traits; however, relationships with non-target species, such as sea turtles, have not been adequately studied. We examined species composition, timing of captures, morphological variables including body size and head width, and body condition of sea turtles captured from
Authors
Margaret Lamont, Robert Michael Mollenhauer, Allen M. Foley

Estimating actual evapotranspiration over croplands using vegetation index methods and dynamic harvested area

Advances in estimating actual evapotranspiration (ETa) with remote sensing (RS) have contributed to improving hydrological, agricultural, and climatological studies. In this study, we evaluated the applicability of Vegetation-Index (VI) -based ETa (ET-VI) for mapping and monitoring drought in arid agricultural systems in a region where a lack of ground data hampers ETa work. To map ETa (2000–2019)
Authors
Neda Abbasi, Hamideh Nouri, Kamel Didan, Armando Barreto Munez, Sattar Chavoshi Borujeni, Hamidreza Salemi, Christian Opp, Stefan Siebert, Pamela L. Nagler

Effects of stream intermittency on minnow (Leuciscidae) and darter (Percidae) trophic dynamics in an agricultural watershed

Stream intermittency is predicted to increase where water withdrawals and climate warming are increasing. In regions coupled with high fish diversity, understanding how intermittency influences fish trophic ecology is critical for informing ecosystem function. This study compared fish diets across seasons in perennial and intermittent streams to estimate the immediate and cumulative effects of str
Authors
Christine E. Fallon, Krista A. Capps, Mary Freeman, Chelsea R. Smith, Stephen W. Golladay

Golden eagle population surveys in the vicinity of the Altamont Pass Wind Resource Area, California, 2014–21

Golden Eagles (Aquila chrysaetos) are among the highest profile species killed by collisions with wind turbines at the Altamont Pass Wind Resource Area (APWRA) in the northern Diablo Range of west-central California. Understanding the distribution, site occupancy, and nesting status of eagles near the APWRA is needed to identify and minimize possible population-level impacts. We established a broa
Authors
J. David Wiens, Patrick S. Kolar

Whence Orycteropus? The correct authorship and date for the generic name of the aardvark (Mammalia, Tubulidentata, Orycteropodidae)

All else being equal, the principle of priority in zoological taxonomic nomenclature gives precedence to the earliest name for a particular taxon. Determining the origin of some late eighteenth- and early nineteenth-century taxonomic names, however, can be vexing, particularly when the history of a name was never completely documented in contemporary synonymies. The authorship and date for Orycter
Authors
Neal Woodman

Mapping biological soil crusts in a Hawaiian dryland

Historical and ongoing land use patterns in the Hawaiian Islands have degraded the Islands’ drylands, causing erosion and detrimentally affecting adjacent coastal marine ecosystems. Biological soil crust (biocrust) communities have been shown to increase soil stability in drylands worldwide, but their efficacy in mitigating soil erosion in Hawaiian drylands is largely unknown. Using a combination
Authors
Eszter Collier, Ryan L. Perroy, Sasha C. Reed, Jon P Price

Using fish community and population indicators to assess the biological condition of streams and rivers of the Chesapeake Bay watershed, USA

The development of indicators to assess relative freshwater condition is critical for management and conservation. Predictive modeling can enhance the utility of indicators by providing estimates of condition for unsurveyed locations. Such approaches grant understanding of where “good” and “poor” conditions occur and provide insight into landscape contexts supporting such conditions. However, as a
Authors
Kelly O. Maloney, Kevin P. Krause, Matthew Joseph Cashman, Wesley M. Daniel, Benjamin Paul Gressler, Daniel J. Wieferich, John A. Young

Oral sylvatic plague vaccine does not adequately protect prairie dogs (Cynomys spp.) for endangered black-footed ferret (Mustela nigripes) conservation

The plague bacterium Yersinia pestis is lethal to endangered black-footed ferrets (Mustela nigripes, BFF) and the prairie dogs (Cynomys spp., PD) on which they depend for habitat and prey. We assessed the effectiveness of an oral sylvatic plague vaccine delivered in baits to black-tailed PD (Cynomys ludovicianus, BTPD) from 2013 to 2017 on the Charles M. Russell National Wildlife Refuge (CMR) in n
Authors
Marc R. Matchett, Thomas Stanley, Matthew F. McCollister, David A. Eads, Jesse Boulerice, Dean E. Biggins

Integrated science for the study of perfluoroalkyl and polyfluoroalkyl substances (PFAS) in the environment—A strategic science vision for the U.S. Geological Survey

Concerns related to perfluoroalkyl and polyfluoroalkyl substances (PFAS) in sources of drinking water and in natural and engineered environments have captured national attention over the last few decades. This report provides an overview of the science gaps that exist in the fields of study related to PFAS that are relevant to the U.S. Geological Survey mission and identifies opportunities where t
Authors
Andrea K. Tokranov, Paul M. Bradley, Michael J. Focazio, Douglas B. Kent, Denis R. LeBlanc, Jeff W. McCoy, Kelly L. Smalling, Jeffery A. Steevens, Patricia L. Toccalino

Historic coregonine habitat use and assessment of larval nursery locations in Lake Erie

Coregonine fishes (Coregonus spp.) are important components of Great Lake food webs and support lucrative commercial and recreational fisheries. Due to a combination of several factors including habitat loss, over-exploitation, and introduction of exotic species, the distribution and abundance of coregonines have been reduced. Examples of these declines are evident in Lake Erie where cisco (C. art
Authors
Hannah M Schaefer, Edward F. Roseman, Robin L. DeBruyne, Christopher Vandergoot, James S. Diana