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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Forest fire, thinning, and flood in wildland-urban interface: UAV and lidar-based estimate of natural disaster impacts

ContextWildland-urban interface (WUI) areas are facing increased forest fire risks and extreme precipitation events due to climate change, which can lead to post-fire flood events. The city of Flagstaff in northern Arizona, USA experienced WUI forest thinning, fire, and record rainfall events, which collectively contributed to large floods and damages to the urban neighborhoods and city infrastruc
Authors
Temuulen Ts. Sankey, Lauren Tango, Julia Tatum, Joel B. Sankey

Flow cytometric assessments of metabolic activity in bacterial assemblages provide insight into ecosystem condition along the Buffalo National River, Arkansas

The Buffalo National River (BNR), on karst terrain in Arkansas, is considered an extraordinary water resource. Water collected in Spring 2017 along BNR was metagenomically analyzed using 16S rDNA, and for 17 months (5/2017–11/2018), bacterial responses were measured in relation to nutrients sampled along a stretch of BNR near a concentrated animal feed operation (CAFO) on Big Creek. Because cell c
Authors
Jill Jenkins, Rassa Dale, Nina M. Hoffpauir, Brooke A Baudoin, Caroline Matkin, Lucas Driver, Shawn W Hodges, Bonnie L. Brown

Range-wide population trend analysis for greater sage-grouse (Centrocercus urophasianus)—Updated 1960–2023

Greater sage-grouse (Centrocercus urophasianus) are at the center of state and national land-use policies largely because of their unique life-history traits as an ecological indicator for health of sagebrush ecosystems. This updated population trend analysis provides state and federal land and wildlife managers with best-available science to help guide management and conservation plans aimed at b
Authors
Brian G. Prochazka, Peter S. Coates, Cameron L. Aldridge, Michael S. O'Donnell, David R. Edmunds, Adrian P. Monroe, Steve E. Hanser, Lief A. Wiechman, Michael P. Chenaille

Local environments, not invasive hybridization, influence cardiac performance of native trout under acute thermal stress

Climate-induced expansion of invasive hybridization (breeding between invasive and native species) poses a significant threat to the persistence of many native species worldwide. In the northern U.S. Rocky Mountains, hybridization between native cutthroat trout and non-native rainbow trout has increased in recent decades due, in part, to climate-driven increases in water temperature. It has been p
Authors
Jeffrey Strait, Jared Grummer, Nicholas Hoffman, Clint C. Muhlfeld, Shawn R. Narum, Gordon Luikart

Stable isotopes reveal that foraging strategy dictates trophic response of salt marsh residents to black mangrove Avicennia germinans range expansion

Climate warming has facilitated the expansion of black mangrove Avicennia germinans (hereafter ‘Avicennia’) into smooth cordgrass Spartina alterniflora (hereafter ‘Spartina’) salt marshes in southeastern Louisiana (USA). As macrophytes contribute to soil organic matter (SOM) and primary production, this transition could alter the basal energy pathways supporting salt marsh food webs. We used bulk-
Authors
Katherine B. Loesser, Christina E. Powell, Brandeus Davis, Melissa Millman Baustian, Michael J. Polito

Wildfire burn severity and stream chemistry influence aquatic invertebrate and riparian avian mercury exposure in forested ecosystems

Terrestrial soils in forested landscapes represent some of the largest mercury (Hg) reserves globally. Wildfire can alter the storage and distribution of terrestrial-bound Hg via reemission to the atmosphere or mobilization in watersheds where it may become available for methylation and uptake into food webs. Using data associated with the 2007 Moonlight and Antelope Fires in California, we examin
Authors
Garth Herring, Lora B. Tennant, James Willacker, Matthew Johnson, Rodney B. Siegel, Julie S. Polasik, Collin Eagles-Smith

Outcomes of control and monitoring of a widespread riparian invader (Tamarix spp.): A comparison of synthesis approaches

Effective ecological restoration requires empirical assessment to determine outcomes of projects, but conclusions regarding the effects of restoration treatments on the whole ecosystem remain rare. Control of invasive shrubs and trees in the genus Tamarix and associated riparian restoration in the American Southwest has been of interest to scientists and resource managers for decades; dozens of st
Authors
Alexander R.B. Goetz, Eduardo Gonzalez-Sargas, Mayra C. Vidal, Patrick B. Shafroth, Annie L. Henry, Anna A. Sher

Are threatened seabird colonies of the pacific ocean genetically vulnerable? The case of the red-tailed tropicbird, Phaethon rubricauda, as a model species

Oceanic seabirds have suffered population declines and extirpations due to human disturbance and still face multiple threats. Here, we assessed the potential genetic vulnerability of the red-tailed tropicbird, Phaethon rubricauda, a seabird species threatened by human disturbance and listed as ‘least concern’ by the IUCN. Using Single Nucleotide Polymorphisms (SNPs) we evaluated the genetic popula
Authors
Andrea I. Varela, Katherina Brokordt, Juliana A. Vianna, María José Frugone, Stefanie M.H. Ismar-Rebitz, Chris P. Gaskin, Nicholas Carlile, Terence O'Dwyer, Josh Adams, Eric A. Vanderwerf, Guillermo Luna-Jorquera

Exposure to and biomarker responses from legacy and emerging contaminants along three drainages in the Milwaukee Estuary, Wisconsin, USA

Legacy contaminants and contaminants of emerging concern (CECs) were assessed in tree swallow (Tachycineta bicolor) tissue and diet samples from three drainages in the Milwaukee estuary, Wisconsin, USA, to understand exposures and possible biomarker responses. Two remote Wisconsin lakes were assessed for comparative purposes. Bioaccumulative classes of contaminants, such as polybrominated diphenyl
Authors
Christine M. Custer, Thomas W. Custer, Paul Dummer, Sandra L. Schultz, Natalie K. Karouna-Renier, Chi Yen Tseng, Cole W. Matson

Adaptive resource management: Achieving functional eradication of invasive snakes to benefit avian conservation

Natural resource management often co-occurs with considerable uncertainty. One approach to mitigating uncertainty is through adaptive resource management (ARM), a specialized form of structured decision-making that modifies management decisions or actions through monitoring and implementation.Here, we present a case study on the attempted eradication of an invasive brown treesnake (Boiga irregular
Authors
Melia Gail Nafus, Amanda Reyes, Thomas Fies, Scott Michael Goetz

Assessing trade-offs in developing a landscape-scale nest monitoring programme for a threatened shorebird

Effective monitoring of wildlife species requires thorough planning and development of survey programmes that can address management and conservation objectives. Decisions about monitoring programmes include where to survey, survey design and how much effort to allocate at survey sites are typically predicated on limited budgets and available resources. When the scope of inference requires monitor
Authors
Kristen S. Ellis, Michael J. Anteau, Garrett J. MacDonald, Megan Ring, Mark H. Sherfy, Rose J. Swift, Dustin L. Toy

The chytrid insurance hypothesis: Integrating parasitic chytrids into a biodiversity–ecosystem functioning framework for phytoplankton–zooplankton population dynamics

In temperate lakes, eutrophication and warm temperatures can promote cyanobacteria blooms that reduce water quality and impair food-chain support. Although parasitic chytrids of phytoplankton might compete with zooplankton, they also indirectly support zooplankton populations through the “mycoloop”, which helps move energy and essential dietary molecules from inedible phytoplankton to zooplankton.
Authors
András Abonyi, Johanna Fornberg, Serena Rasconi, Robert Ptacnik, Martin J. Kainz, Kevin D. Lafferty