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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41763

Effects of culverts on habitat connectivity in streams—A science synthesis to inform National Environmental Policy Act analyses

The U.S. Geological Survey is working with Federal land management agencies to develop a series of science syntheses to support environmental effects analyses that agencies conduct to comply with the National Environmental Policy Act (NEPA). This report synthesizes science information about the potential effects of culverts on stream connectivity and subsequent effects on fish. We conducted a stru
Authors
Richard J. Lehrter, Tait K. Rutherford, Jason B. Dunham, Aaron N. Johnston, David J.A. Wood, Travis S. Haby, Sarah K. Carter

Approaches for using CMIP projections in climate model ensembles to address the ‘hot model’ problem

Several recent generation global-climate models were found to have anomalously high climate sensitivities and may not be useful for certain applications. Four approaches for developing ensembles of climate projections for applications that address this issue are:Using an “all models” approach;Screening using equilibrium climate sensitivity and (or) transient climate response;Bayesian model averagi
Authors
Ryan Boyles, Catherine A. Nikiel, Brian W. Miller, Jeremy Littell, Adam J. Terando, Imtiaz Rangwala, Jay R. Alder, Derek H. Rosendahl, Adrienne M. Wootten

Disease-smart climate adaptation for wildlife management and conservation

Climate change is a well-documented driver and threat multiplier of infectious disease in wildlife populations. However, wildlife disease management and climate-change adaptation have largely operated in isolation. To improve conservation outcomes, we consider the role of climate adaptation in initiating or exacerbating the transmission and spread of wildlife disease and the deleterious effects th
Authors
Lindsey Thurman, Katrina E. Alger, Olivia E. LeDee, Laura Thompson, Erik K. Hofmeister, Michael J Hudson, Alynn Martin, Tracy Melvin, Sarah H Olson, Mathieu Pruvot, Jason R. Rohr, Jennifer Szymanksi, Oscar Aleuy, Benjamin Zuckerberg

Parasites alter food-web topology of a subarctic lake food web and its pelagic and benthic compartments

We compared three sets of highly resolved food webs with and without parasites for a subarctic lake system corresponding to its pelagic and benthic compartments and the whole-lake food web. Key topological food-web metrics were calculated for each set of compartments to explore the role parasites play in food-web topology in these highly contrasting webs. After controlling for effects from differe
Authors
Shannon E. Moore, Anna Siwertsson, Kevin D. Lafferty, Armand M. Kuris, Miroslava Soldánová, Dana N. Morton, Raul Primicerio, Per-Arne Amundsen

Driophlox, a new genus of cardinalid (Aves: Passeriformes: Cardinalidae)

No abstract available.
Authors
Ben F Scott, R. Terry Chesser, Philip Unitt, Kevin J Burns

Upstream experience and experimental translocation of invasive bigheaded carps results in increased upstream passage success at a navigation lock in a large river

Fish movements in regulated rivers can be challenging to study because anthropogenic modifications, such as locks and dams, can influence animal behavior. Upper Mississippi River Lock and Dam 19 (LD 19), for example, is an invasive carp movement bottleneck due to an impassable dam. Upstream fish passage at LD19 is restricted to the lock chamber, making it an optimal location to test invasive fish
Authors
Andrea K. Fritts, Daniel Gibson-Reinemer, Brent Knights, Amanda S. Milde, Jessica C. Stanton, Marybeth K. Brey, Douglas Appel, Aaron R. Cupp, Sarah Tripp, James T. Lamer, Mark W. Fritts

Life-history connections to long-term fish population trends in a species-rich temperate river

Fishes exhibit a diverse range of traits encompassing life-history strategies, feeding behaviours and spawning behaviours. These traits mediate fish population responses to changing environmental conditions such as those caused by anthropogenic stressors. The Conasauga River, located in northwestern Georgia and southeastern Tennessee, USA, hosts a diverse assemblage of over 75 species of freshwate
Authors
Andrew J. Nagy, Mary Freeman, Brian J. Irwin, Seth J. Wenger

Precision of four calcified structures for age estimation of Black Carp

ObjectiveBlack Carp Mylopharyngodon piceus is an emerging invasive species in North America with an expanding population in the Mississippi River basin. Current aging methods use a suite of structures for age estimation, and a single structure is needed to minimize processing time, to maximize consistency of age and growth measurements, and to allow for back-calculation of individual fish length a
Authors
Patrick Kroboth, Anne Marie Herndon, Cortney Cox, Jesse Robert Fischer

Local and systemic replicative fitness for viruses in specialist, generalist, and non-specialist interactions with salmonid hosts

Host tissues represent diverse resources or barriers for pathogen replicative fitness. We tested whether viruses in specialist, generalist, and non-specialist interactions replicate differently in local entry tissue (fin), and systemic target tissue (kidney) using infectious hematopoietic necrosis virus (IHNV) and three salmonid fish hosts. Virus tissue replication was host specific, but one featu
Authors
David James Páez, Gael Kurath, Rachel L. Powers, Kerry A. Naish, Maureen K. Purcell

Establishing quantitative benchmarks for soil erosion and ecological monitoring, assessment, and management

Soil erosion can have a multitude of negative impacts on agroecosystems and society and there remains an urgent need for tools to support its management. Quantitative benchmarks based on holistic understanding of erosion processes, ecosystem function, and land use objectives can be used with monitoring data and models to inform assessments and make objective and actionable decisions about erosion
Authors
Nicholas P. Webb, Brandon L. Edwards, Alexandra Heller, Sarah E. McCord, Jeremy W. Schallner, Ronald S. Treminio, Brandi E. Wheeler, Nelson G. Stauffer, Sheri Spiegal, Michael C. Duniway, Alexander C.E. Traynor, Emily Kachergis, Carrie-Ann Houdeshell

Pesticides in small volume plasma samples: Method development and application to smallmouth bass (Micropterus dolomieu) from the Chesapeake Bay watershed, USA

Nontarget organisms are exposed to pesticides following applications in agricultural and urban settings, potentially resulting in deleterious effects. Direct measurements of pesticides in biological tissues may aid in characterizing exposure, accumulation, and potential toxicity versus analyses in environmental media alone (e.g., water, soil, and air). Plasma represents a nonlethal sampling medium
Authors
Michael S. Gross, Vicki S. Blazer, Michelle Hladik

Variability in weather and site properties affect fuel and fire behavior following fuel treatments in semiarid sagebrush-steppe.

Fuel-treatments targeting shrubs and fire-prone exotic annual grasses (EAGs) are increasingly used to mitigate increased wildfire risks in arid and semiarid environments, and understanding their response to natural factors is needed for effective landscape management. Using field-data collected over four years from fuel-break treatments in semiarid sagebrush-steppe, we asked 1) how the outcomes of
Authors
Samuel J. Price, Matthew Germino