Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41753
Bees of the Buenos Aires National Wildlife Refuge—A preliminary report on a bee survey in a vulnerable semi-desert grassland of the Sonoran Desert
Pollinators are vital to the continued existence and seed production of about 87.5 percent of all flowering plants (Ollerton and others, 2011). In the semi-desert grasslands of Buenos Aires National Wildlife Refuge, in the Sonoran Desert of the United States, flowering forbs provide seed vital to the food base of wildlife, including the 136 species of resident and migratory birds using the Refuge’
Authors
Kathryn A. Thomas, Angela M. Hoover, M. Kathryn Busby
Neotropical migratory bird monitoring study at Marine Corps Base Camp Pendleton, California—2021 annual data summary
Executive SummaryTwo Monitoring Avian Productivity and Survivorship (MAPS) stations were operated at Marine Corps Base Camp Pendleton (MCBCP), California, in 2021: one at De Luz Creek and one at the Santa Margarita River. The stations were established to provide data on Neotropical migratory birds at MCBCP to support the dual missions of environmental stewardship and military readiness.A total of
Authors
Shannon Mendia, Barbara E. Kus
Status of greater sage-grouse in the Bi-State Distinct Population Segment—An evaluation of population trends, habitat selection, and efficacy of conservation actions
PrefaceThis study was completed to provide timely scientific information regarding greater sage-grouse population trends, habitat selection, and the efficacy of previous conservation actions implemented to benefit the Bi-State Distinct Population Segment (DPS). Specifically, we provide these analyses to inform the current (2024) status review and pending listing decision for the DPS being undertak
Authors
Peter S. Coates, Megan C. Milligan, Brian G. Prochazka, Brianne E. Brussee, Shawn T. O'Neil, Carl G. Lundblad, Sarah C. Webster, Cali L. Weise, Steven R. Mathews, Michael P. Chenaille, Cameron L. Aldridge, Michael S. O'Donnell, Shawn P. Espinosa, Amy C. Sturgill, Kevin E. Doherty, John C. Tull, Katherine Miller, Lief A. Wiechman, Steve Abele, John Boone, Heather Stone, Michael L. Casazza
The where and why of large wood occurrence in the Upper Mississippi and Illinois Rivers
Large wood (LW) plays important geomorphic and ecological roles in rivers and is widely used as a restoration tool. Changes to floodplain land use and historical removal have altered wood dynamics in fluvial systems globally. We know little about the distribution and dynamics of LW in great rivers (approximately >105 km2) like the Upper Mississippi and Illinois Rivers despite its ecosystem importa
Authors
Molly Van Appledorn, Kathi Jo Jankowski, Kaija Gahm, Serenity Budd, Douglas Baumann, Barbara Bennie, Richard A. Erickson, Roger J. Haro, Jason J. Rohweder
Potential hazards of polycyclic aromatic hydrocarbons in Great Lakes tributaries using water column and porewater passive samplers and sediment wquilibrium partitioning
The potential for polycyclic aromatic hydrocarbon (PAH)-related effects in benthic organisms is commonly estimated from organic carbon-normalized sediment concentrations based on equilibrium partitioning (EqP). Although this approach is useful for screening purposes, it may overestimate PAH bioavailability by orders of magnitude in some sediments, leading to inflated exposure estimates and potenti
Authors
Austin K. Baldwin, Steven R. Corsi, David Alvarez, David L. Villeneuve, Gerald T. Ankley, Brett R. Blackwell, Marc A. Mills, Peter L. Lenaker, Michelle A. Nott
Temporal habitat use of mule deer in the Pueblo of Santa Ana, New Mexico
Mule deer (Odocoileus hemionus) are important economically, culturally, and recreationally to the Pueblo of Santa Ana in central New Mexico, USA. Studies of habitat selection improve our understanding of mule deer ecology in central New Mexico and provide the Tribe with valuable information for management of mule deer. We used global positioning system telemetry-collar data collected on mule deer
Authors
Daniel E. Bird, Laura D'Acunto, Daniel Ginter, Glenn Harper, Patrick A. Zollner
Egg mercury concentration and egg size varies with position in the laying sequence in two songbird species
In birds, mercury embryotoxicity can occur through the transfer of mercury from the female to her eggs. Maternal transfer of mercury can vary by egg position in the laying sequence, with first-laid eggs often exhibiting greater mercury concentrations than subsequently laid eggs. We studied egg mercury concentration, mercury burden (total amount of mercury in the egg), and egg morphometrics by egg
Authors
C. Alex Hartman, Josh T. Ackerman, Breanne Cooney, Mark P. Herzog
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
The Long-read RNA-Seq Genome Annotation Assessment Project Consortium was formed to evaluate the effectiveness of long-read approaches for transcriptome analysis. Using different protocols and sequencing platforms, the consortium generated over 427 million long-read sequences from complementary DNA and direct RNA datasets, encompassing human, mouse and manatee species. Developers utilized these da
Authors
Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell-Sala, Brian Williams, Jane E. Loveland, Maite De María, Matthew S. Adams, Gabriela Balderrama-Gutierrez, Amit K. Behera, Jose M. Gonzalez Martinez, Toby Hunt, Julien Lagarde, Cindy E. Liang, Haoran Li, Marcus Jerryd Meade, David A. Moraga Amador, Andrey D. Prjibelski, Inanc Birol, Hamed Bostan, Ashley M. Brooks, Muhammed Hasan Çelik, Ying Chen, Mei R.M. Du, Colette Felton, Jonathan Göke, Saber Hafezqorani, Ralf Herwig, Hideya Kawaji, Joseph Lee, Jian-Liang Li, Matthias Lienhard, Alla Mikheenko, Dennis Mulligan, Ka Ming Nip, Mihaela Pertea, Matthew E. Ritchie, Andre D. Sim, Alison D. Tang, Yuk Kei Wan, Changqing Wang, Brandon Y. Wong, Chen Yang, If Barnes, Andrew E. Berry, Salvador Capella-Gutierrez, Alyssa Cousineau, Namrita Dhillon, Jose M. Fernandez-Gonzalez, Luis Ferrández-Peral, Natàlia Garcia-Reyero, Stefan Götz, Carles Hernández-Ferrer, Liudmyla Kondratova, Tianyuan Liu, Alessandra Martinez-Martin, Carlos Menor, Jorge Mestre-Tomás, Jonathan M. Mudge, Nedka G. Panayotova, Alejandro Paniagua, Dmitry Repchevsky, Xingjie Ren, Eric Rouchka, Brandon Saint-John, Enrique Sapena, Leon Sheynkman, Melissa Laird Smith, Marie-Marthe Suner, Hazuki Takahashi, Ingrid A. Youngworth, Piero Carninci, Nancy D. Denslow, Roderic Guigó, Maggie Hunter, Rene Maehr, Yin Shen, Hagen U. Tilgner, Barbara J. Wold, Christopher Vollmers, Adam Frankish, Kin Fai Au, Gloria M. Sheynkman, Ali Mortazavi, Ana Conesa, Angela N. Brooks
Bornean Wren-Babbler Ptilocichla leucogrammica
No abstract available.
Authors
Ryan C. Burner, Guy M. Kirwan, Peter Pyle, Nigel J. Collar, Craig Robson
Bare-headed Laughingthrush Melanocichla calva
No abstract available.
Authors
Ryan C. Burner, Guy M. Kirwan, Peter Pyle, Nigel J. Collar, Craig Robson
Hirsutonosema embarrassi n. gen. n. sp. (Phylum Microsporidia) in the Ovary of Mucket (Actinonaias ligamentina), Plain Pocketbook (Lampsilis cardium), and Fatmucket (Lampsilis siliquoidea) (Unionidae) from the Embarrass River, Wisconsin, USA
During an epidemiological survey following a mortality event of freshwater mussels in 2018 in the Embarrass River, Wisconsin, USA, we identified a novel microsporidian parasite in the ovaries of mucket (Actinonaias ligamentina), plain pocketbook (Lampsilis cardium), and fatmucket (Lampsilis siliquoidea) (Unionidae). Histopathology showed round-to-oval microsporidian spores in the cytoplasm of oocy
Authors
Susan Knowles, Eric M. Leis, J.C. Richard, I.F. Standish, Jamie Bojko, Jesse Weinzinger, Diane L. Waller
Fish invasion of prairie pothole wetlands reduces amphipod abundance, a key vertebrate forage
Fishes have spread into previously fishless wetlands, likely affecting other species. In the Prairie Pothole Region of North America, the invasion of fish into wetlands is facilitated by interactions of altered land use, climate, and hydrology. We aimed to understand the effects of fishes on amphipods, which are macroinvertebrates that vertebrates rely on as forage. We hypothesized the presence an
Authors
Jake D. Carleen, Danelle M. Larson, Michael J. Anteau, Megan J. Fitzpatrick, Andrew W. Hafs, Carl W. Isaacson, Breanna R. Keith