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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41778

Limitations, lack of standardization, and recommended best practices in studies of renewable energy effects on birds and bats

Increasing global energy demand is fostering the development of renewable energy as an alternative to fossil fuels. However, renewable energy facilities may adversely affect wildlife. Facility siting guidelines recommend or require project developers complete pre‐ and postconstruction wildlife surveys to predict risk and estimate effects of proposed projects. Despite this, there are no published s
Authors
Tara Conkling, S. R. Loss, James E. Diffendorfer, A. Duerr, Todd E. Katzner

Characterization of the genetic structure of four sucker species in the Klamath River. Final Report

Four species of suckers (family Catostomidae) inhabit the Klamath River Basin of Oregon and California: Lost River suckers (LRS; Deltistes luxatus), shortnose suckers (SNS; Chasmistes brevirostris), Klamath largescale suckers (KLS; Catostomus snyderi), and Klamath smallscale suckers (KSS; Catostomus rimiculus). All but Klamath smallscale suckers are endemic and restricted to the Klamath River Basi
Authors
Matt Smith, Jennifer Von Bargen, Christian A. Smith, Michael A. Miller, Josh Rasmussen, David A. Hewitt

Conservation–Protection of forests for wildlife in the Mississippi Alluvial Valley

The nearly ubiquitous bottomland hardwood forests that historically dominated the Mississippi Alluvial Valley have been greatly reduced in area. In addition, changes in hydrology and forest management have altered the structure and composition of the remaining forests. To ameliorate the detrimental impact of these changes on wildlife, conservation plans have emphasized restoration to increase inte
Authors
A. Blaine Elliott, Anne Mini, S. Keith McKnight, Daniel J. Twedt

Acute toxicity of the lampricides TFM and niclosamide: Effects on a vascular plant and a chironomid species

The lampricides 3-trifluoromethyl-4-nitrophenol (TFM) and niclosamide have been used for about 60 years to control sea lamprey (Petromyzon marinus) in the Great Lakes Basin and Lake Champlain. To register these chemicals as pesticides in North America, their environmental effects must be reviewed on a periodic basis. As a part of this effort, toxicity of TFM and niclosamide to duckweed (Lemna gi
Authors
Tom Leak, John Aufderheide, Alan Bergfield, Terrance D. Hubert

Habitat of the endangered salt marsh harvest mouse (Reithrodontomys raviventris) in San Francisco Bay

Understanding habitat associations is vital for conservation of at‐risk marsh‐endemic wildlife species, particularly those under threat from sea level rise. We modeled environmental and habitat associations of the marsh‐endemic, Federally endangered salt marsh harvest mouse (Reithrodontomys raviventris, RERA) and co‐occurrence with eight associated small mammal species from annual trap data, 1998–
Authors
Bruce G. Marcot, Isa Woo, Karen M. Thorne, Chase M. Freeman, Glenn R. Guntenspergen

Remnant hardwood forest mapping within the Upper Mississippi River floodplain

Executive SummaryThe primary objective of the project was to locate previously unknown stands of mast-producing hardwood forest trees in the Upper Mississippi River floodplain using existing information. We located and mapped 399 previously unknown hardwood forest stands within the Mississippi River floodplain area of navigation pools 9, 10, and 11. Using color infrared images in combination with
Authors
Jenny L. Hanson, Rich King, Erin E. Hoy

Field-based method for assessing duration of infectivity for influenza A viruses in the environment

Understanding influenza A virus (IAV) persistence in wetlands is limited by a paucity of field studies relating to the maintenance of infectivity over time. The duration of IAV infectivity in water has been assessed under variable laboratory conditions, but results are difficult to translate to more complex field conditions. We tested a field-based method to assess the viability of IAVs in an Alas
Authors
Andrew B. Reeves, Andrew M. Ramey, Joshua C. Koch, Rebecca L. Poulson, David E. Stallknecht

Copper concentrations in the upper Columbia River as a limiting factor in White Sturgeon recruitment and recovery

Currently there is little natural recruitment of white sturgeon (Acipenser transmontanus) in the Upper Columbia River located in British Columbia, Canada and Washington, USA. This review of life history, physiology, and behavior of white sturgeon, along with data from recent toxicological studies, suggest that trace metals, especially Cu, affect survival and behavior of early life stage fish. Sturg
Authors
Holly J. Puglis, Aida Farag, Christopher A. Mebane

Stand density, drought, and herbivory constrain ponderosa pine regeneration pulse

Trees in dry forests often regenerate in episodic pulses when wet periods coincide with ample seed production. Factors leading to success or failure of regeneration pulses are poorly understood. We investigated the impacts of stand thinning on survival and growth of the 2013 cohort of ponderosa pine (Pinus ponderosa Douglas ex P. Lawson & C. Lawson) seedlings in northern Arizona, United States. We
Authors
Thomas E. Kolb, Kelsey Flathers, John Bradford, Caitlin M. Andrews, Lance A. Asherin, W. Keith Moser

Economic impacts of Wyoming Landscape Conservation Initiative Conservation projects in Wyoming

Executive SummaryThis report estimates the economic impacts on the Wyoming economy from investments made by the Wyoming Landscape Conservation Initiative (WLCI) on conservation and restoration projects. The WLCI has been working in southwestern Wyoming since 2007 to coordinate science and management decisions among government and private entities that invest in conservation projects aimed at resto
Authors
Christopher Huber, Matthew Flyr, Catherine Cullinane Thomas

Sustaining Environmental Capital Initiative summary report

Federal agencies need credible scientific information to determine the production and value of ecosystem services in an efficient and timely manner. The U.S. Geological Survey addresses this scientific information need through the Sustaining Environmental Capital Initiative project. The project has relied on U.S. Geological Survey expertise related to water, fisheries, advanced modeling, and econo
Authors
Christopher Huber, James Meldrum, Rudy Schuster, Zachary H. Ancona, Kenneth J. Bagstad, Scott M. Beck, Daren Carlisle, Peter R. Claggett, Fabiano Franco, Heather S. Galbraith, Michelle Haefele, Kristin R Hoelting, Dianna M. Hogan, Kristina G. Hopkins, Tim Kern, Collin B. Lawrence, Stacy Lischka, John B. Loomis, Julie M. Mueller, Gregory Noe, Emily J. Pindilli, Brian Quay, Darius J. Semmens, Wilson Sinclair, Daniel E. Spooner, Brian Voigt, Barabara St. John White

Integrating side-scan sonar and acoustic telemetry to estimate the annual spawning run size of Atlantic sturgeon in the Hudson River

There is considerable interest in evaluating the status and trends of sturgeon populations, yet many traditional approaches to estimating the abundance of fishes are intractable due to their biology and rarity. Side-scan sonar has recently emerged as an effective tool for censusing sturgeon in rivers, yet challenges remain for censusing open populations that may visit specific habitats over period
Authors
David C. Kazyak, Amy M Flowers, Nathan J. Hostetter, John A Madsen, Matthew W. Breece, Amanda Higgs, Lori M. Brown, Andy Royle, Dewayne A. Fox